| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is dfrA [H]
Identifier: 78065668
GI number: 78065668
Start: 1129985
End: 1130485
Strand: Reverse
Name: dfrA [H]
Synonym: Bcep18194_A4196
Alternate gene names: 78065668
Gene position: 1130485-1129985 (Counterclockwise)
Preceding gene: 78065669
Following gene: 78065666
Centisome position: 30.6
GC content: 68.86
Gene sequence:
>501_bases ATGACGACGTTGACCCTGATCGTCGCGCGTGCCCGCAACGGCATCATCGGCCGCGACAACCAGTTGCCCTGGAAACTTCC CGAAGATCTCGCCTTCTTCAAGCGCACGACGATGGGCGCACCGATCGTGATGGGCCGCAAGACCCACGAGTCGATCGGCC GGCCGCTGCCGGGCCGCCGCAATATCGTCGTCACGCGCGACGCGACGCGTCGCTTCGACGGCTGCGACACGGTCACGTCG CTCGCCGATGCGCTGGCGCTCGCCGCGCGCGACGGCGCGCCCGAAGCGTTCCTGATCGGCGGCGCGCAGCTCTACACGGA AGGTCTCGCACTCGCCGACAAGCTGGTCGTCACCGAGATCGATGCCGACTTCGATGGGGACGCCTCGTTCCCGGCGCCCG ACGCCGCGCAGTGGCAGGAAGTGTCGCGCGATGCGCACCACGCGGCCGCACCGAACACGTTCGGCTACGCGTTCGTCGTC TACGAGCGCAAGCGCGGCTGA
Upstream 100 bases:
>100_bases GCGGCGCGCAGTGCAGGAGCGGATACGCGCACCCGGAACCGGCGCGCGCCGCCGTTCCGGTAGAATCGGCGCCATTCCGG TTTTCCTTTCCCCGACCTTC
Downstream 100 bases:
>100_bases CGCATCACGCGCCATGAAAAAAGCCCGACCGGCTCATGCCGGTCGGGCTTTTTGTTTGATGGCGGCCGATGCCGCGCGCC GCTTACTGCCCGGCGATCGT
Product: dihydrofolate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTTLTLIVARARNGIIGRDNQLPWKLPEDLAFFKRTTMGAPIVMGRKTHESIGRPLPGRRNIVVTRDATRRFDGCDTVTS LADALALAARDGAPEAFLIGGAQLYTEGLALADKLVVTEIDADFDGDASFPAPDAAQWQEVSRDAHHAAAPNTFGYAFVV YERKRG
Sequences:
>Translated_166_residues MTTLTLIVARARNGIIGRDNQLPWKLPEDLAFFKRTTMGAPIVMGRKTHESIGRPLPGRRNIVVTRDATRRFDGCDTVTS LADALALAARDGAPEAFLIGGAQLYTEGLALADKLVVTEIDADFDGDASFPAPDAAQWQEVSRDAHHAAAPNTFGYAFVV YERKRG >Mature_165_residues TTLTLIVARARNGIIGRDNQLPWKLPEDLAFFKRTTMGAPIVMGRKTHESIGRPLPGRRNIVVTRDATRRFDGCDTVTSL ADALALAARDGAPEAFLIGGAQLYTEGLALADKLVVTEIDADFDGDASFPAPDAAQWQEVSRDAHHAAAPNTFGYAFVVY ERKRG
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=182, Percent_Identity=30.7692307692308, Blast_Score=73, Evalue=1e-13, Organism=Escherichia coli, GI1786233, Length=163, Percent_Identity=41.7177914110429, Blast_Score=135, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17505899, Length=184, Percent_Identity=29.8913043478261, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI116008026, Length=161, Percent_Identity=33.5403726708075, Blast_Score=70, Evalue=8e-13, Organism=Drosophila melanogaster, GI24647458, Length=161, Percent_Identity=33.5403726708075, Blast_Score=70, Evalue=8e-13,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 18027; Mature: 17895
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLTLIVARARNGIIGRDNQLPWKLPEDLAFFKRTTMGAPIVMGRKTHESIGRPLPGRR CCCEEEEEEHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCC NIVVTRDATRRFDGCDTVTSLADALALAARDGAPEAFLIGGAQLYTEGLALADKLVVTEI CEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHEEEEEEE DADFDGDASFPAPDAAQWQEVSRDAHHAAAPNTFGYAFVVYERKRG CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCC >Mature Secondary Structure TTLTLIVARARNGIIGRDNQLPWKLPEDLAFFKRTTMGAPIVMGRKTHESIGRPLPGRR CCEEEEEEHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCC NIVVTRDATRRFDGCDTVTSLADALALAARDGAPEAFLIGGAQLYTEGLALADKLVVTEI CEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHEEEEEEE DADFDGDASFPAPDAAQWQEVSRDAHHAAAPNTFGYAFVVYERKRG CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2840350; 9384377 [H]