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The map label for this gene is ydfJ [H]

Identifier: 78065202

GI number: 78065202

Start: 615450

End: 616898

Strand: Direct

Name: ydfJ [H]

Synonym: Bcep18194_A3726

Alternate gene names: 78065202

Gene position: 615450-616898 (Clockwise)

Preceding gene: 78065201

Following gene: 78065203

Centisome position: 16.66

GC content: 69.98

Gene sequence:

>1449_bases
ATGGATCGCATTTCCCCGCCGCCCGCGCGGCACGATGCAGGGTCCGGTGCGCCGGGCGAGACCGTCGAGCGCCGCGGCGT
CGACACGAAGCAGCTCAACCGCGCGGCATGGACCTGCTCGCTCGGCAGCGCGCTCGAATACTACGATTTCGCGTTGTACA
CGCTCGCGTCGGCGCTGGTGTTCGGGCCGCTGTTCTTTCCCGCGCAGACCGCCGAGATGCGGCTGATCGCGAGCTTCGGC
ACCTACTTCGTCGGCTTCGCGGTGCGCCCGCTCGGCGGCGTCGTGTTCGGCATACTCGGCGACCGGATCGGCCGCAAGTT
CGTGCTGACCGCGACGGTGCTGCTGATGGGCATCGCGAGCACGCTGATCGGCGTGTTGCCGACCTTCGCGACGGCCGGTT
ACTGGGCGCCCGCGCTGCTGATCCTGCTGCGCATCCTGCAGGGCCTCGGTGCCGGCGCGGAGCAGGCCGGCGCCGCGGTG
CTGATGACCGAATACGCGCCGCCGGGCAAGCGCGGCTTCTATGCGTCGCTGCCGTTTCTCGGCATCCAGCTCGGCACGGT
GCTCGCGGCGGCCGTCTATTTCCTGCTGCTCGCGAACATCGACCGCGTGACCGACGGCTGGGGCTGGCGCGTGCCGTTCC
TGTTCAGCGCGGTGATCGTCGCAGTCGGGATCTACATGCGCGTGCGGCTGCACGAGTCGCCGACCTTCGTGCGGCTCGAG
AAGCGTGCGCAGGTCCTGGCCAATCCGCTGAAAAGCGCCGTGCAGCATTCGAAGCGCTCGCTGCTGATCGGCATCGGCCT
GCGGATGGCCGAGAACGGCGGCTCGTCGATTTACCAGGCGCTCGCGGTCAGCTATCTCGCCGGCGTGATCGGGATGAAGG
GGCCGGTCGGTGCGCTCGCGCTGGTGTGCGCGGCGACCGTCGGCGCGTGCACGGTGCCGCTGGCCGGCTGGCTGAGCGAC
CGTTACGGCCGCGTGCGCGTGTATCGCACGTTCGCATGGCTGCAACTCGCGCTCGCCTTCCCGGTGTGGTGGATCTTCAG
CCACGGCAACGTGGTCGCGAGCGTGATCGCGATCTCGGTCGCGCAGGGCTTCGCGAACTGGGGGATGCTCGGCGCGCAGG
CCGCGCTGCTGCCCGAACTGTTCGGCGCGCGCCATCGCTACATGGGCGTGTCGTTCTCGCGCGAAGTGTCGGCGGTGCTC
GCGGGCGGGATCGCGCCGCTCGTCGGTGCGACGATCATCGCAACCGTGATCGCCATGCACGGCGGCGACCACACGGCCGG
CGTGCGCGCATGGGTGCCGATCGCCGCGTACCTGGTGCTGCTGACGCTGATCACGCTGTTCACGACGTCGCGGATGCCGG
AAACGCTGAACCGCGATCTCGACGATCCGCTCGACGCGGCGCAGGCGGCACCGGCCCCGGACGCCGATGCGATCGCGCGG
CACGCATGA

Upstream 100 bases:

>100_bases
CGAATTCCCAGAAGAGCCCGCCGTCATGAGCGGGCCGATGTCCCGGTCGCGCGACGCGTAGCCGGGTTCCGGAACGGAAG
GCAGGAGACAGGAGACAACG

Downstream 100 bases:

>100_bases
ACGGGCCGGGCGGCTGACGCGGCCCGGCACGCTTTCGCATTCAACTTATCTCGACAGGAGCAAGCGCAGATGGCGCACGA
ATCGACCCAGCGGCCCGACC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MDRISPPPARHDAGSGAPGETVERRGVDTKQLNRAAWTCSLGSALEYYDFALYTLASALVFGPLFFPAQTAEMRLIASFG
TYFVGFAVRPLGGVVFGILGDRIGRKFVLTATVLLMGIASTLIGVLPTFATAGYWAPALLILLRILQGLGAGAEQAGAAV
LMTEYAPPGKRGFYASLPFLGIQLGTVLAAAVYFLLLANIDRVTDGWGWRVPFLFSAVIVAVGIYMRVRLHESPTFVRLE
KRAQVLANPLKSAVQHSKRSLLIGIGLRMAENGGSSIYQALAVSYLAGVIGMKGPVGALALVCAATVGACTVPLAGWLSD
RYGRVRVYRTFAWLQLALAFPVWWIFSHGNVVASVIAISVAQGFANWGMLGAQAALLPELFGARHRYMGVSFSREVSAVL
AGGIAPLVGATIIATVIAMHGGDHTAGVRAWVPIAAYLVLLTLITLFTTSRMPETLNRDLDDPLDAAQAAPAPDADAIAR
HA

Sequences:

>Translated_482_residues
MDRISPPPARHDAGSGAPGETVERRGVDTKQLNRAAWTCSLGSALEYYDFALYTLASALVFGPLFFPAQTAEMRLIASFG
TYFVGFAVRPLGGVVFGILGDRIGRKFVLTATVLLMGIASTLIGVLPTFATAGYWAPALLILLRILQGLGAGAEQAGAAV
LMTEYAPPGKRGFYASLPFLGIQLGTVLAAAVYFLLLANIDRVTDGWGWRVPFLFSAVIVAVGIYMRVRLHESPTFVRLE
KRAQVLANPLKSAVQHSKRSLLIGIGLRMAENGGSSIYQALAVSYLAGVIGMKGPVGALALVCAATVGACTVPLAGWLSD
RYGRVRVYRTFAWLQLALAFPVWWIFSHGNVVASVIAISVAQGFANWGMLGAQAALLPELFGARHRYMGVSFSREVSAVL
AGGIAPLVGATIIATVIAMHGGDHTAGVRAWVPIAAYLVLLTLITLFTTSRMPETLNRDLDDPLDAAQAAPAPDADAIAR
HA
>Mature_482_residues
MDRISPPPARHDAGSGAPGETVERRGVDTKQLNRAAWTCSLGSALEYYDFALYTLASALVFGPLFFPAQTAEMRLIASFG
TYFVGFAVRPLGGVVFGILGDRIGRKFVLTATVLLMGIASTLIGVLPTFATAGYWAPALLILLRILQGLGAGAEQAGAAV
LMTEYAPPGKRGFYASLPFLGIQLGTVLAAAVYFLLLANIDRVTDGWGWRVPFLFSAVIVAVGIYMRVRLHESPTFVRLE
KRAQVLANPLKSAVQHSKRSLLIGIGLRMAENGGSSIYQALAVSYLAGVIGMKGPVGALALVCAATVGACTVPLAGWLSD
RYGRVRVYRTFAWLQLALAFPVWWIFSHGNVVASVIAISVAQGFANWGMLGAQAALLPELFGARHRYMGVSFSREVSAVL
AGGIAPLVGATIIATVIAMHGGDHTAGVRAWVPIAAYLVLLTLITLFTTSRMPETLNRDLDDPLDAAQAAPAPDADAIAR
HA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Escherichia coli, GI1788292, Length=427, Percent_Identity=35.1288056206089, Blast_Score=227, Evalue=1e-60,
Organism=Escherichia coli, GI1789941, Length=395, Percent_Identity=36.9620253164557, Blast_Score=202, Evalue=6e-53,
Organism=Escherichia coli, GI1790550, Length=466, Percent_Identity=31.9742489270386, Blast_Score=195, Evalue=5e-51,
Organism=Escherichia coli, GI1788942, Length=394, Percent_Identity=31.2182741116751, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI87082231, Length=292, Percent_Identity=25, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004736
- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 51082; Mature: 51082

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRISPPPARHDAGSGAPGETVERRGVDTKQLNRAAWTCSLGSALEYYDFALYTLASALV
CCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHH
FGPLFFPAQTAEMRLIASFGTYFVGFAVRPLGGVVFGILGDRIGRKFVLTATVLLMGIAS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
TLIGVLPTFATAGYWAPALLILLRILQGLGAGAEQAGAAVLMTEYAPPGKRGFYASLPFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEECCCCCCCCCCEECCCHH
GIQLGTVLAAAVYFLLLANIDRVTDGWGWRVPFLFSAVIVAVGIYMRVRLHESPTFVRLE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEHHH
KRAQVLANPLKSAVQHSKRSLLIGIGLRMAENGGSSIYQALAVSYLAGVIGMKGPVGALA
HHHHHHHHHHHHHHHHHHCCEEEEECEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
LVCAATVGACTVPLAGWLSDRYGRVRVYRTFAWLQLALAFPVWWIFSHGNVVASVIAISV
HHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AQGFANWGMLGAQAALLPELFGARHRYMGVSFSREVSAVLAGGIAPLVGATIIATVIAMH
HHHHHHCCHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
GGDHTAGVRAWVPIAAYLVLLTLITLFTTSRMPETLNRDLDDPLDAAQAAPAPDADAIAR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCCCCCHHHHHC
HA
CC
>Mature Secondary Structure
MDRISPPPARHDAGSGAPGETVERRGVDTKQLNRAAWTCSLGSALEYYDFALYTLASALV
CCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHH
FGPLFFPAQTAEMRLIASFGTYFVGFAVRPLGGVVFGILGDRIGRKFVLTATVLLMGIAS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
TLIGVLPTFATAGYWAPALLILLRILQGLGAGAEQAGAAVLMTEYAPPGKRGFYASLPFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEECCCCCCCCCCEECCCHH
GIQLGTVLAAAVYFLLLANIDRVTDGWGWRVPFLFSAVIVAVGIYMRVRLHESPTFVRLE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEHHH
KRAQVLANPLKSAVQHSKRSLLIGIGLRMAENGGSSIYQALAVSYLAGVIGMKGPVGALA
HHHHHHHHHHHHHHHHHHCCEEEEECEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
LVCAATVGACTVPLAGWLSDRYGRVRVYRTFAWLQLALAFPVWWIFSHGNVVASVIAISV
HHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AQGFANWGMLGAQAALLPELFGARHRYMGVSFSREVSAVLAGGIAPLVGATIIATVIAMH
HHHHHHCCHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
GGDHTAGVRAWVPIAAYLVLLTLITLFTTSRMPETLNRDLDDPLDAAQAAPAPDADAIAR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCCCCCHHHHHC
HA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]