| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is gno [H]
Identifier: 78065201
GI number: 78065201
Start: 614485
End: 615294
Strand: Direct
Name: gno [H]
Synonym: Bcep18194_A3725
Alternate gene names: 78065201
Gene position: 614485-615294 (Clockwise)
Preceding gene: 78065199
Following gene: 78065202
Centisome position: 16.63
GC content: 68.77
Gene sequence:
>810_bases ATGGGCCGCCGGCTCGACTGGCACGAGGAGACACGCATGACCAACGCGCTTGAACGGTTCCGCCTCGACGGCCGCCGCGC ACTGATTACCGGTTCCGGACGCGGAATCGGGCTGACGCTTGCCCGTGGGCTGGCCGAAGCGGGGGCGGCGATCGTCATCA ACGATCGCAATGAGGAGAAGGCCGCGACGCTCGTGCGGCATCTGCGCGAGGAAGGCTTCACGGCCGACTACGCGGTATTC GACGTCGCCGAGCACGCACAGGTGCGCGCGGCGATCGACGATTTCGAGGCGCGCGTCGGTGCGATCGACATCCTCGTGAA CAACGCGGGCATCCAGCGCCGCGCACCGCTCGACGCGTTCGAACCCGATGACTGGCACGCGCTGATGCGCGTGAACCTCG ACGGCGTGTTCAACGTCGCGCAGGCCGTTGCGCGGCACATGATCGCGCGCGGCCGCGGCAAGATCATCAACATCTGCTCG GTGCAGAGCGAGCTCGCGCGGCCGACGATCGCGCCGTACGCGGCGACCAAGGGCGCGGTGCGGATGCTGACGAAAGGGAT GTGCGCCGACTGGGCACGCCACGGCATCCAGGCGAACGGCCTCGCGCCCGGCTATTTCGAAACCGAACTCAACCGCGCGC TGGTCGACGACGCAGCGTTCTCGGACTGGCTGTGCAAGCGCACGCCGGCCGGCCGCTGGGGGCGCGTCGACGAGCTGTGC GGCGCGGCGATCTTCCTCGCGTCGGCCGCGTCCGATTTCGTGAACGGCCAGACGCTGTTCGTCGACGGCGGCTTGACCAG CGCCGTTTAA
Upstream 100 bases:
>100_bases GAGGGCGGTGATCAGGTTTCATGATAACCGGATCAAAAAAGACCATTGGCGCAGCGCCCGGCCGGCGGCCGAAGATACCG TCAACGCGAGACCGGCCGCG
Downstream 100 bases:
>100_bases GCGGCGGCGCTTGCGCCGTGTGCGCAGCGCCGTTGCGCCGGCTCGCGCCGGCATCCGAATTCCCAGAAGAGCCCGCCGTC ATGAGCGGGCCGATGTCCCG
Product: Short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 5-keto-D-gluconate 5-reductase [H]
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MGRRLDWHEETRMTNALERFRLDGRRALITGSGRGIGLTLARGLAEAGAAIVINDRNEEKAATLVRHLREEGFTADYAVF DVAEHAQVRAAIDDFEARVGAIDILVNNAGIQRRAPLDAFEPDDWHALMRVNLDGVFNVAQAVARHMIARGRGKIINICS VQSELARPTIAPYAATKGAVRMLTKGMCADWARHGIQANGLAPGYFETELNRALVDDAAFSDWLCKRTPAGRWGRVDELC GAAIFLASAASDFVNGQTLFVDGGLTSAV
Sequences:
>Translated_269_residues MGRRLDWHEETRMTNALERFRLDGRRALITGSGRGIGLTLARGLAEAGAAIVINDRNEEKAATLVRHLREEGFTADYAVF DVAEHAQVRAAIDDFEARVGAIDILVNNAGIQRRAPLDAFEPDDWHALMRVNLDGVFNVAQAVARHMIARGRGKIINICS VQSELARPTIAPYAATKGAVRMLTKGMCADWARHGIQANGLAPGYFETELNRALVDDAAFSDWLCKRTPAGRWGRVDELC GAAIFLASAASDFVNGQTLFVDGGLTSAV >Mature_268_residues GRRLDWHEETRMTNALERFRLDGRRALITGSGRGIGLTLARGLAEAGAAIVINDRNEEKAATLVRHLREEGFTADYAVFD VAEHAQVRAAIDDFEARVGAIDILVNNAGIQRRAPLDAFEPDDWHALMRVNLDGVFNVAQAVARHMIARGRGKIINICSV QSELARPTIAPYAATKGAVRMLTKGMCADWARHGIQANGLAPGYFETELNRALVDDAAFSDWLCKRTPAGRWGRVDELCG AAIFLASAASDFVNGQTLFVDGGLTSAV
Specific function: Involved in the non-phosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate. Dependent on NADP, almost inactive with NAD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI7705925, Length=251, Percent_Identity=33.8645418326693, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI15277342, Length=254, Percent_Identity=31.8897637795276, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI19923817, Length=254, Percent_Identity=30.3149606299213, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=29.0836653386454, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI40254992, Length=239, Percent_Identity=30.1255230125523, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI66933014, Length=250, Percent_Identity=31.6, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI59889578, Length=232, Percent_Identity=31.8965517241379, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI4503301, Length=224, Percent_Identity=25, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI10190704, Length=242, Percent_Identity=28.9256198347107, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI4504505, Length=230, Percent_Identity=30.8695652173913, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI20149619, Length=190, Percent_Identity=31.0526315789474, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=26.8, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI210032110, Length=207, Percent_Identity=26.0869565217391, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI7706318, Length=191, Percent_Identity=28.2722513089005, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI4758504, Length=257, Percent_Identity=29.5719844357977, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI5031737, Length=246, Percent_Identity=25.2032520325203, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI7705855, Length=199, Percent_Identity=26.6331658291457, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI4557649, Length=203, Percent_Identity=28.0788177339901, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI209862901, Length=197, Percent_Identity=28.9340101522843, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI19923983, Length=197, Percent_Identity=28.9340101522843, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI226371731, Length=211, Percent_Identity=25.1184834123223, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI31542939, Length=213, Percent_Identity=24.8826291079812, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI126723191, Length=195, Percent_Identity=28.7179487179487, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI109715829, Length=208, Percent_Identity=27.8846153846154, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI83715985, Length=258, Percent_Identity=29.4573643410853, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI4502599, Length=154, Percent_Identity=26.6233766233766, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1790717, Length=250, Percent_Identity=57.6, Blast_Score=301, Evalue=4e-83, Organism=Escherichia coli, GI1789208, Length=252, Percent_Identity=42.0634920634921, Blast_Score=167, Evalue=6e-43, Organism=Escherichia coli, GI87082160, Length=249, Percent_Identity=36.9477911646586, Blast_Score=164, Evalue=7e-42, Organism=Escherichia coli, GI1787335, Length=246, Percent_Identity=34.5528455284553, Blast_Score=145, Evalue=3e-36, Organism=Escherichia coli, GI1788459, Length=244, Percent_Identity=34.8360655737705, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=35.5731225296443, Blast_Score=127, Evalue=6e-31, Organism=Escherichia coli, GI1787905, Length=247, Percent_Identity=33.1983805668016, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1786812, Length=253, Percent_Identity=29.2490118577075, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI2367175, Length=247, Percent_Identity=31.9838056680162, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI2367365, Length=241, Percent_Identity=31.1203319502075, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1789378, Length=247, Percent_Identity=28.3400809716599, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1789057, Length=256, Percent_Identity=26.5625, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787820, Length=178, Percent_Identity=27.5280898876405, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787526, Length=189, Percent_Identity=26.984126984127, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17555706, Length=260, Percent_Identity=31.5384615384615, Blast_Score=118, Evalue=3e-27, Organism=Caenorhabditis elegans, GI25147288, Length=247, Percent_Identity=31.1740890688259, Blast_Score=118, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17561402, Length=251, Percent_Identity=30.6772908366534, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17560676, Length=254, Percent_Identity=28.740157480315, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=29.811320754717, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI115534694, Length=251, Percent_Identity=29.8804780876494, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17560150, Length=263, Percent_Identity=29.277566539924, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17536651, Length=263, Percent_Identity=28.1368821292776, Blast_Score=101, Evalue=5e-22, Organism=Caenorhabditis elegans, GI71994600, Length=246, Percent_Identity=30.4878048780488, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI71994604, Length=245, Percent_Identity=30.6122448979592, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17562906, Length=263, Percent_Identity=27.3764258555133, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17531453, Length=264, Percent_Identity=28.7878787878788, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17536025, Length=251, Percent_Identity=27.4900398406374, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17562910, Length=272, Percent_Identity=29.0441176470588, Blast_Score=97, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17561272, Length=257, Percent_Identity=30.3501945525292, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17560220, Length=262, Percent_Identity=27.8625954198473, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17560332, Length=268, Percent_Identity=29.8507462686567, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17538480, Length=264, Percent_Identity=28.7878787878788, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17562990, Length=263, Percent_Identity=28.8973384030418, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17562908, Length=265, Percent_Identity=26.4150943396226, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI193204405, Length=261, Percent_Identity=27.5862068965517, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17551412, Length=269, Percent_Identity=30.4832713754647, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17559104, Length=260, Percent_Identity=28.0769230769231, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17568967, Length=212, Percent_Identity=31.6037735849057, Blast_Score=87, Evalue=9e-18, Organism=Caenorhabditis elegans, GI17538486, Length=268, Percent_Identity=29.4776119402985, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17563726, Length=267, Percent_Identity=27.7153558052434, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17565030, Length=263, Percent_Identity=30.0380228136882, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI72000259, Length=269, Percent_Identity=26.7657992565056, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17544670, Length=265, Percent_Identity=26.7924528301887, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17538182, Length=262, Percent_Identity=30.1526717557252, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17564282, Length=213, Percent_Identity=26.7605633802817, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI193203117, Length=162, Percent_Identity=29.6296296296296, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI193203115, Length=165, Percent_Identity=30.3030303030303, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17508895, Length=194, Percent_Identity=29.3814432989691, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI32563809, Length=216, Percent_Identity=25.9259259259259, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17507613, Length=210, Percent_Identity=25.7142857142857, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI115534660, Length=197, Percent_Identity=26.9035532994924, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71982365, Length=192, Percent_Identity=26.0416666666667, Blast_Score=64, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17567345, Length=197, Percent_Identity=23.8578680203046, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=190, Percent_Identity=27.8947368421053, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324126, Length=248, Percent_Identity=22.9838709677419, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6323882, Length=197, Percent_Identity=28.9340101522843, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI24639444, Length=248, Percent_Identity=35.8870967741936, Blast_Score=124, Evalue=9e-29, Organism=Drosophila melanogaster, GI28571526, Length=242, Percent_Identity=32.2314049586777, Blast_Score=111, Evalue=5e-25, Organism=Drosophila melanogaster, GI21355319, Length=249, Percent_Identity=28.1124497991968, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=29.718875502008, Blast_Score=107, Evalue=6e-24, Organism=Drosophila melanogaster, GI24643142, Length=245, Percent_Identity=30.2040816326531, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI21357041, Length=242, Percent_Identity=30.5785123966942, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24644339, Length=246, Percent_Identity=29.6747967479675, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24644337, Length=251, Percent_Identity=29.8804780876494, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI21358495, Length=200, Percent_Identity=29.5, Blast_Score=87, Evalue=9e-18, Organism=Drosophila melanogaster, GI161076933, Length=196, Percent_Identity=32.1428571428571, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI24584748, Length=196, Percent_Identity=32.1428571428571, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI24584744, Length=195, Percent_Identity=30.2564102564103, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI28574402, Length=195, Percent_Identity=30.2564102564103, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI281364892, Length=170, Percent_Identity=31.7647058823529, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI18859837, Length=203, Percent_Identity=32.0197044334975, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI17737361, Length=252, Percent_Identity=28.1746031746032, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24640492, Length=178, Percent_Identity=28.0898876404494, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI21357673, Length=235, Percent_Identity=26.8085106382979, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI21356301, Length=202, Percent_Identity=27.2277227722772, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24581726, Length=199, Percent_Identity=31.1557788944724, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24640442, Length=196, Percent_Identity=26.0204081632653, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24641232, Length=201, Percent_Identity=29.3532338308458, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24584752, Length=197, Percent_Identity=28.4263959390863, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI24665243, Length=219, Percent_Identity=28.7671232876712, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI221331218, Length=206, Percent_Identity=28.6407766990291, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.69 [H]
Molecular weight: Translated: 29231; Mature: 29099
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRRLDWHEETRMTNALERFRLDGRRALITGSGRGIGLTLARGLAEAGAAIVINDRNEEK CCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCHHH AATLVRHLREEGFTADYAVFDVAEHAQVRAAIDDFEARVGAIDILVNNAGIQRRAPLDAF HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCC EPDDWHALMRVNLDGVFNVAQAVARHMIARGRGKIINICSVQSELARPTIAPYAATKGAV CCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCHHHHHHHH RMLTKGMCADWARHGIQANGLAPGYFETELNRALVDDAAFSDWLCKRTPAGRWGRVDELC HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH GAAIFLASAASDFVNGQTLFVDGGLTSAV HHHHHHHHHHHHHCCCCEEEEECCHHCCC >Mature Secondary Structure GRRLDWHEETRMTNALERFRLDGRRALITGSGRGIGLTLARGLAEAGAAIVINDRNEEK CCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCHHH AATLVRHLREEGFTADYAVFDVAEHAQVRAAIDDFEARVGAIDILVNNAGIQRRAPLDAF HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCC EPDDWHALMRVNLDGVFNVAQAVARHMIARGRGKIINICSVQSELARPTIAPYAATKGAV CCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCHHHHHHHH RMLTKGMCADWARHGIQANGLAPGYFETELNRALVDDAAFSDWLCKRTPAGRWGRVDELC HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH GAAIFLASAASDFVNGQTLFVDGGLTSAV HHHHHHHHHHHHHCCCCEEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7751271 [H]