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The map label for this gene is nudK [H]

Identifier: 78048439

GI number: 78048439

Start: 3277796

End: 3278416

Strand: Reverse

Name: nudK [H]

Synonym: XCV2883

Alternate gene names: 78048439

Gene position: 3278416-3277796 (Counterclockwise)

Preceding gene: 78048441

Following gene: 78048437

Centisome position: 63.31

GC content: 60.71

Gene sequence:

>621_bases
TTGATTCCCTCTGCCACCGGCAACCCGCAGGTCCGCATCCGCAGCATCGATGTGCTCTCGGACAATTGGTATGTGCTGCG
CAAGGTCACGTTCGATTTCCAGCGCAAGGACGGCCGCTGGCAGACCTTGTCGCGCGAGGCCTACGATCGTGGCAATGGCG
CCACCATTCTGCTGTACAGCCGCGCCAAGCAGACGGTGATGCTCACCCGCCAGTTCCGCCTGCCGACGCTGCTAAATGGC
AACCCGGATGGCATGTTGATCGAAGCCTGTGCCGGCCTGCTCGACCAGGACGATGCGCTGACCTGCATCCGCAAGGAAAC
CGAAGAGGAAACCGGCTACCGGATCGACAACGTGCGCAAGGTATTCGAGGCCTTCATGAGCCCTGGCTCGGTCACCGAAC
GCCTGTACTTTTTCGTCGGCGAATACGTCGACGGCGACAAGGTCAGCTGCGGCGGTGGACTCGAAGAAGACGGCGAAGAG
ATCGAAGTGCTGGAGCTGTCACTGGATGCAGCGCTGGCGATGATCGGCTCAGGGAAGATCGCCGATGCCAAGACCATCAT
GCTGTTGCAGTACGCCAAGTTGCATGGCGTGTTGGAGTCCGTTCACGCCAACACGCGGTAG

Upstream 100 bases:

>100_bases
ACAGGTAAAATGGTGGCCCGCCGCACTATCGCGGCCCTACGAGCGACCGTGCGCGCCGCAACCGTGGCACTGCCGTCGCT
TGCATCACAAGGAGTGTCGC

Downstream 100 bases:

>100_bases
CCCTTCACGGCGACGGTGTCATCGAGACGTGGCAGCGGCGATCAAGCAGATCATCGCTTCCCGCCAAAAATGCTACCGAA
GATGCCGCGCACGATCTGCT

Product: putative NUDIX hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MIPSATGNPQVRIRSIDVLSDNWYVLRKVTFDFQRKDGRWQTLSREAYDRGNGATILLYSRAKQTVMLTRQFRLPTLLNG
NPDGMLIEACAGLLDQDDALTCIRKETEEETGYRIDNVRKVFEAFMSPGSVTERLYFFVGEYVDGDKVSCGGGLEEDGEE
IEVLELSLDAALAMIGSGKIADAKTIMLLQYAKLHGVLESVHANTR

Sequences:

>Translated_206_residues
MIPSATGNPQVRIRSIDVLSDNWYVLRKVTFDFQRKDGRWQTLSREAYDRGNGATILLYSRAKQTVMLTRQFRLPTLLNG
NPDGMLIEACAGLLDQDDALTCIRKETEEETGYRIDNVRKVFEAFMSPGSVTERLYFFVGEYVDGDKVSCGGGLEEDGEE
IEVLELSLDAALAMIGSGKIADAKTIMLLQYAKLHGVLESVHANTR
>Mature_206_residues
MIPSATGNPQVRIRSIDVLSDNWYVLRKVTFDFQRKDGRWQTLSREAYDRGNGATILLYSRAKQTVMLTRQFRLPTLLNG
NPDGMLIEACAGLLDQDDALTCIRKETEEETGYRIDNVRKVFEAFMSPGSVTERLYFFVGEYVDGDKVSCGGGLEEDGEE
IEVLELSLDAALAMIGSGKIADAKTIMLLQYAKLHGVLESVHANTR

Specific function: Catalyzes the hydrolysis of GDP-mannose [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1788810, Length=184, Percent_Identity=53.804347826087, Blast_Score=206, Evalue=1e-54,
Organism=Escherichia coli, GI1789412, Length=196, Percent_Identity=27.5510204081633, Blast_Score=78, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24650557, Length=160, Percent_Identity=29.375, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004385
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 23004; Mature: 23004

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPSATGNPQVRIRSIDVLSDNWYVLRKVTFDFQRKDGRWQTLSREAYDRGNGATILLYS
CCCCCCCCCEEEEEEEEEECCCEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEC
RAKQTVMLTRQFRLPTLLNGNPDGMLIEACAGLLDQDDALTCIRKETEEETGYRIDNVRK
CCCCEEEEEEECCCCEEECCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHH
VFEAFMSPGSVTERLYFFVGEYVDGDKVSCGGGLEEDGEEIEVLELSLDAALAMIGSGKI
HHHHHCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEEEEHHHHHHHHCCCCC
ADAKTIMLLQYAKLHGVLESVHANTR
CCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIPSATGNPQVRIRSIDVLSDNWYVLRKVTFDFQRKDGRWQTLSREAYDRGNGATILLYS
CCCCCCCCCEEEEEEEEEECCCEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEC
RAKQTVMLTRQFRLPTLLNGNPDGMLIEACAGLLDQDDALTCIRKETEEETGYRIDNVRK
CCCCEEEEEEECCCCEEECCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHH
VFEAFMSPGSVTERLYFFVGEYVDGDKVSCGGGLEEDGEEIEVLELSLDAALAMIGSGKI
HHHHHCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEEEEHHHHHHHHCCCCC
ADAKTIMLLQYAKLHGVLESVHANTR
CCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA