| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78048429
Identifier: 78048429
GI number: 78048429
Start: 3265128
End: 3265685
Strand: Reverse
Name: 78048429
Synonym: XCV2873
Alternate gene names: NA
Gene position: 3265685-3265128 (Counterclockwise)
Preceding gene: 78048430
Following gene: 78048428
Centisome position: 63.06
GC content: 67.03
Gene sequence:
>558_bases ATGAGCCCGGCGATCGATCGCCTTGCCGCGCAGGAAAGTGACGCACGCGAGCGCCGGATCGACTATGTGGAGTTCGCCTC CATCGATCCGGATGCCAGCCGTGCGTTCTTCGAAGCGGTGTTCGGTTGGCAATTCCAGGCCTACGGTCCGGATTACCTGG CCCTCAACGATGGACGCCTGGACGGCGGCTTCTACCGTGCAGCCGCGCCGGCGCCGGACGGGGGTGGTCCGCTTGTGGTG TTGTATGCCGACGCGTTGGCCCCGGTGATCGAGCGCGTGCGTGGCGCAGGCGGGGTGATCGTCAAGCCGGTCTTCGGCTT TCCGGGCGGAGCCGGTTTCATTTCCGCGAGCCCGGCGGCACCACGTTGGCCGTGTGGTCCGAGCGCAGCGTCGCGTCCGA CGACTGACTGCGCGCTGGTCGCACGCGCGTCCCGCGGCTCGGCACCAGCCAATGCGGCTCGTACACTTCACCTTTTTTGC AGCGACGGGGCTGTGCTGGCAATCGCCTGCGATGGCGGCGGCATGACCGGCGCGCCGATTTCATCGATTCACTCATAG
Upstream 100 bases:
>100_bases TGGGCGACAAGGACACCGCGCGCGGCCTGCTGCTGGAAGTTGCCGCCACCGGCGACGACGCCACGCGCGCCGAAGCCGCC GAGCTGCTGGAACGCCTGGC
Downstream 100 bases:
>100_bases GGCAGGTACCGATGCGTTACGCGCTGGGCGTGGAATACGACGGCAGCGAGTTCCAGGGCTGGCAGCAGTTGGGCGAGCAT GGCGGGCCGAGCGTGCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Glyoxalase Family Protein; Glyoxalase/Dioxygenase Superfamily Protein; Glyoxalase/Bleomycin Resistance Protein; Glyoxalase; Lactoylglutathione Lyase; Glyoxalase I
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSPAIDRLAAQESDARERRIDYVEFASIDPDASRAFFEAVFGWQFQAYGPDYLALNDGRLDGGFYRAAAPAPDGGGPLVV LYADALAPVIERVRGAGGVIVKPVFGFPGGAGFISASPAAPRWPCGPSAASRPTTDCALVARASRGSAPANAARTLHLFC SDGAVLAIACDGGGMTGAPISSIHS
Sequences:
>Translated_185_residues MSPAIDRLAAQESDARERRIDYVEFASIDPDASRAFFEAVFGWQFQAYGPDYLALNDGRLDGGFYRAAAPAPDGGGPLVV LYADALAPVIERVRGAGGVIVKPVFGFPGGAGFISASPAAPRWPCGPSAASRPTTDCALVARASRGSAPANAARTLHLFC SDGAVLAIACDGGGMTGAPISSIHS >Mature_184_residues SPAIDRLAAQESDARERRIDYVEFASIDPDASRAFFEAVFGWQFQAYGPDYLALNDGRLDGGFYRAAAPAPDGGGPLVVL YADALAPVIERVRGAGGVIVKPVFGFPGGAGFISASPAAPRWPCGPSAASRPTTDCALVARASRGSAPANAARTLHLFCS DGAVLAIACDGGGMTGAPISSIHS
Specific function: Unknown
COG id: COG3324
COG function: function code R; Predicted enzyme related to lactoylglutathione lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18970; Mature: 18839
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPAIDRLAAQESDARERRIDYVEFASIDPDASRAFFEAVFGWQFQAYGPDYLALNDGRL CCHHHHHHHHCCCCHHHHHCCEEEEECCCCCHHHHHHHHHHCCEEEECCCCEEEEECCCC DGGFYRAAAPAPDGGGPLVVLYADALAPVIERVRGAGGVIVKPVFGFPGGAGFISASPAA CCCEEEECCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCC PRWPCGPSAASRPTTDCALVARASRGSAPANAARTLHLFCSDGAVLAIACDGGGMTGAPI CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCC SSIHS HHCCC >Mature Secondary Structure SPAIDRLAAQESDARERRIDYVEFASIDPDASRAFFEAVFGWQFQAYGPDYLALNDGRL CHHHHHHHHCCCCHHHHHCCEEEEECCCCCHHHHHHHHHHCCEEEECCCCEEEEECCCC DGGFYRAAAPAPDGGGPLVVLYADALAPVIERVRGAGGVIVKPVFGFPGGAGFISASPAA CCCEEEECCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCC PRWPCGPSAASRPTTDCALVARASRGSAPANAARTLHLFCSDGAVLAIACDGGGMTGAPI CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCC SSIHS HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA