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The map label for this gene is 78048430

Identifier: 78048430

GI number: 78048430

Start: 3265682

End: 3267766

Strand: Reverse

Name: 78048430

Synonym: XCV2874

Alternate gene names: NA

Gene position: 3267766-3265682 (Counterclockwise)

Preceding gene: 78048431

Following gene: 78048429

Centisome position: 63.1

GC content: 70.12

Gene sequence:

>2085_bases
TTGCATTGGCCACGCATGCATGCCGCACTGCGGCAGTGTCGCTGGCACAGCGCTCTGCATCACGGCGCCGACTTTTTCGC
TCATCCAGCGGCTATATTGATGCCCATGAAACATAGGGGCGTGGGCGCGATGCGTCCGATACAAGGGATAGGTGCGTTGC
TGCTGATGGCCTGCAGCGGCGCTGCAATGGCGTTGGGACTGGGCGATATCCGGGTGCTGTCCAAGCCCGGGCAACCGCTG
GTGGCCGAGATTCCGGTCATCTCCAACGAGCCGGGCGAACTCGACAACGCGCGCGTGGCATTGGCATCGGCCACCACGTT
TGCGCGCGTCGGCCTGGAGCGCCCGCAAGGGCTGGTCAGCAATCTGCAGTTCCAGTTCGCGCAGGACGCACGCGGGCGTG
CGGTGATCCGCGTGACCAGCAGCCAGGCGGTGGACCAGCCGGCGATCAACTTCCTGATCGAGGTGGAGTGGGGCCAGGGC
CGGCTGGTGCGCGAATATTCCGCCTTGGTCGATGCGCCCAACACCGCGGCCGCCATCGCCGAGCCGGCCATCGAAGCGCC
GCGTGCCGGTTCCAGCAATGCGATTGCACGCGAGCCGGCGCCGGTCGCCGCGCCCGCCGCGCAGGACAACGCCAGGGCCG
AACCGGCTGCGCGTGCAACTGGCAGTGCGTCTGCTGCGTCTGCGACGCAGGCCGGCGACACGTTGCCGGCCGTGCGCGCG
GGCCAGACCTTGTCGGAGATCGCCGCGGCGGTGGCGCGTTCCAGCGGGCACTCGCTGGACCAGACCATGCTGGCGTTGCT
GCGCACCAATCCGGACGCCTTCATCAACGGCAACATCAATCGCCTGAAGCAGGGCGCGGTGCTGCGCACGCCGCAGGAAG
ACGCGCTTGCCCAGGTCGGTGCGGCCGAAGCGGCGGTCATGGTGCGCGAGCAGGCCGCCAAGTGGCGGCAGGCGCGATCG
GCGGTGCCGCAACCGGCCGAGGCCGGCGCCGCCGCTGCCGCAACGCCGCCGCCCGCCACACCTGCCGCAGCGGCTGGCAA
CGGCGCGCGGCTCGAAATCGCCCCTGCAGTGGCGAGTCAGACCAACAAGGCCGGCGTCACGTCCGGCACCAGTGCCGAAG
GCGAGGGCGAGATGGCGGCCAATCAACAGTTGCAACAGGCCAAGGAAGACATCGCCACCCGCGATGCGGAATTGCAGGAC
CTGCGGACCCGCGTGGCGGATCTGGAAAAGCTCAAGCAGCAACAGCAAGCGCTGATCGCCATGAAGGACAGCGACCTGGC
GGCTGCACAGAAGCGCCTGTCGGAAACCCCGGCGGCCGCACAACAGGGTGGCGGTTTTCCGCTGTGGTTGATCGGCGGGC
TGGTGTTGATCGTCGCGGCCGTGGTGGCGTGGCTGGCCGCGCGCCGTCGCAAACCCTCGCCGCTGCCGCCGTTGCCGCGT
CGGCAGTTCGACTTCGTCCTGCCTGGCGCGCCGGTGCAGGCCGCCGAGCCGCAAGAGGCGACGCAAGCCACTGAGCCCAG
CGAGCCCGATGTGGTGCACGAGACCGAATTCGAGCAGGCCGATCTGCGCGACGAAGAGCGCGCCCATGACGCGCAGCAAC
CATTGTCGGACGTGCTGCGTCGCGAGCCGCTGCCGTCCGAGCCGGCTGCTGCGCCCATGGCGGTCAACAGCGACGATTGG
CGTGCGCTGAGAGCCGCACCGCCGGTGGTGGCAACGCCGCCGCAGGACAGCGCCCCCGTCGACGCGGCGCAGGCTCCGCC
GCACCCGGCGTCCGAGGCCGTGGAAGCGAGTCACGCAGATGTCGCGCCCACGATCGGTGATGTCCCGTCTACCGCTTCCC
CGGTAGCGGTGGCCACGCAAGACAGCCTGGATTTCGAGCGTCCGCCTGCGGCGCCGAGCGCTGCGCCCAGCCCCTCGGCC
AGCCGGGACGTCGCCTCGGCCGGGCGCGATCGCCTGGAACTGGCGGTGGCTTACATGGACCTGGGCGACAAGGACACCGC
GCGCGGCCTGCTGCTGGAAGTTGCCGCCACCGGCGACGACGCCACGCGCGCCGAAGCCGCCGAGCTGCTGGAACGCCTGG
CATGA

Upstream 100 bases:

>100_bases
GGCATCCCGCAGCGCGTGACTTTGCACCACGCAATCTGCCGACAGGCCGTTGCGCGCTTGAGACCTCGCGCAGTGAGAGC
GCCCATCAGCACTTGCCGGT

Downstream 100 bases:

>100_bases
GCCCGGCGATCGATCGCCTTGCCGCGCAGGAAAGTGACGCACGCGAGCGCCGGATCGACTATGTGGAGTTCGCCTCCATC
GATCCGGATGCCAGCCGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Tfp Pilus Assembly Protein FimV-Like Protein; FimV N-Terminal Domain Protein; LysM Domain-Containing Protein; LysM Domain Protein; Lysm Domain; TPR Repeat-Containing Protein; Type 4 Pilus Biogenesis; FimV C-Terminal Domain-Containing Protein; Protein Containing Tetratricopeptide Repeats; Tfp Pilus Assembly Protein FimV-Like; Transmembrane Tfp Pilus Assembly Protein FimV; FimV N-Terminal Domain; FimV N-Terminal Domain-Containing Protein; FimV Type IV Pilus Assembly Protein

Number of amino acids: Translated: 694; Mature: 694

Protein sequence:

>694_residues
MHWPRMHAALRQCRWHSALHHGADFFAHPAAILMPMKHRGVGAMRPIQGIGALLLMACSGAAMALGLGDIRVLSKPGQPL
VAEIPVISNEPGELDNARVALASATTFARVGLERPQGLVSNLQFQFAQDARGRAVIRVTSSQAVDQPAINFLIEVEWGQG
RLVREYSALVDAPNTAAAIAEPAIEAPRAGSSNAIAREPAPVAAPAAQDNARAEPAARATGSASAASATQAGDTLPAVRA
GQTLSEIAAAVARSSGHSLDQTMLALLRTNPDAFINGNINRLKQGAVLRTPQEDALAQVGAAEAAVMVREQAAKWRQARS
AVPQPAEAGAAAAATPPPATPAAAAGNGARLEIAPAVASQTNKAGVTSGTSAEGEGEMAANQQLQQAKEDIATRDAELQD
LRTRVADLEKLKQQQQALIAMKDSDLAAAQKRLSETPAAAQQGGGFPLWLIGGLVLIVAAVVAWLAARRRKPSPLPPLPR
RQFDFVLPGAPVQAAEPQEATQATEPSEPDVVHETEFEQADLRDEERAHDAQQPLSDVLRREPLPSEPAAAPMAVNSDDW
RALRAAPPVVATPPQDSAPVDAAQAPPHPASEAVEASHADVAPTIGDVPSTASPVAVATQDSLDFERPPAAPSAAPSPSA
SRDVASAGRDRLELAVAYMDLGDKDTARGLLLEVAATGDDATRAEAAELLERLA

Sequences:

>Translated_694_residues
MHWPRMHAALRQCRWHSALHHGADFFAHPAAILMPMKHRGVGAMRPIQGIGALLLMACSGAAMALGLGDIRVLSKPGQPL
VAEIPVISNEPGELDNARVALASATTFARVGLERPQGLVSNLQFQFAQDARGRAVIRVTSSQAVDQPAINFLIEVEWGQG
RLVREYSALVDAPNTAAAIAEPAIEAPRAGSSNAIAREPAPVAAPAAQDNARAEPAARATGSASAASATQAGDTLPAVRA
GQTLSEIAAAVARSSGHSLDQTMLALLRTNPDAFINGNINRLKQGAVLRTPQEDALAQVGAAEAAVMVREQAAKWRQARS
AVPQPAEAGAAAAATPPPATPAAAAGNGARLEIAPAVASQTNKAGVTSGTSAEGEGEMAANQQLQQAKEDIATRDAELQD
LRTRVADLEKLKQQQQALIAMKDSDLAAAQKRLSETPAAAQQGGGFPLWLIGGLVLIVAAVVAWLAARRRKPSPLPPLPR
RQFDFVLPGAPVQAAEPQEATQATEPSEPDVVHETEFEQADLRDEERAHDAQQPLSDVLRREPLPSEPAAAPMAVNSDDW
RALRAAPPVVATPPQDSAPVDAAQAPPHPASEAVEASHADVAPTIGDVPSTASPVAVATQDSLDFERPPAAPSAAPSPSA
SRDVASAGRDRLELAVAYMDLGDKDTARGLLLEVAATGDDATRAEAAELLERLA
>Mature_694_residues
MHWPRMHAALRQCRWHSALHHGADFFAHPAAILMPMKHRGVGAMRPIQGIGALLLMACSGAAMALGLGDIRVLSKPGQPL
VAEIPVISNEPGELDNARVALASATTFARVGLERPQGLVSNLQFQFAQDARGRAVIRVTSSQAVDQPAINFLIEVEWGQG
RLVREYSALVDAPNTAAAIAEPAIEAPRAGSSNAIAREPAPVAAPAAQDNARAEPAARATGSASAASATQAGDTLPAVRA
GQTLSEIAAAVARSSGHSLDQTMLALLRTNPDAFINGNINRLKQGAVLRTPQEDALAQVGAAEAAVMVREQAAKWRQARS
AVPQPAEAGAAAAATPPPATPAAAAGNGARLEIAPAVASQTNKAGVTSGTSAEGEGEMAANQQLQQAKEDIATRDAELQD
LRTRVADLEKLKQQQQALIAMKDSDLAAAQKRLSETPAAAQQGGGFPLWLIGGLVLIVAAVVAWLAARRRKPSPLPPLPR
RQFDFVLPGAPVQAAEPQEATQATEPSEPDVVHETEFEQADLRDEERAHDAQQPLSDVLRREPLPSEPAAAPMAVNSDDW
RALRAAPPVVATPPQDSAPVDAAQAPPHPASEAVEASHADVAPTIGDVPSTASPVAVATQDSLDFERPPAAPSAAPSPSA
SRDVASAGRDRLELAVAYMDLGDKDTARGLLLEVAATGDDATRAEAAELLERLA

Specific function: Unknown

COG id: COG3170

COG function: function code NU; Tfp pilus assembly protein FimV

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72138; Mature: 72138

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHWPRMHAALRQCRWHSALHHGADFFAHPAAILMPMKHRGVGAMRPIQGIGALLLMACSG
CCCHHHHHHHHHHHHHHHHHHCCHHHHCCHHHEECHHHCCCCCCCHHHHHHHHHHHHHCC
AAMALGLGDIRVLSKPGQPLVAEIPVISNEPGELDNARVALASATTFARVGLERPQGLVS
CCEEECCCCEEEECCCCCCCEEECCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCHHHHH
NLQFQFAQDARGRAVIRVTSSQAVDQPAINFLIEVEWGQGRLVREYSALVDAPNTAAAIA
HHHHHHHCCCCCCEEEEECCCHHCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCHHHHH
EPAIEAPRAGSSNAIAREPAPVAAPAAQDNARAEPAARATGSASAASATQAGDTLPAVRA
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHCCCCCCHHHC
GQTLSEIAAAVARSSGHSLDQTMLALLRTNPDAFINGNINRLKQGAVLRTPQEDALAQVG
CCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCHHHHHCCCEECCCCHHHHHHHH
AAEAAVMVREQAAKWRQARSAVPQPAEAGAAAAATPPPATPAAAAGNGARLEIAPAVASQ
HHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHCC
TNKAGVTSGTSAEGEGEMAANQQLQQAKEDIATRDAELQDLRTRVADLEKLKQQQQALIA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
MKDSDLAAAQKRLSETPAAAQQGGGFPLWLIGGLVLIVAAVVAWLAARRRKPSPLPPLPR
CCCCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RQFDFVLPGAPVQAAEPQEATQATEPSEPDVVHETEFEQADLRDEERAHDAQQPLSDVLR
CCCCEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHH
REPLPSEPAAAPMAVNSDDWRALRAAPPVVATPPQDSAPVDAAQAPPHPASEAVEASHAD
CCCCCCCCCCCCEEECCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCC
VAPTIGDVPSTASPVAVATQDSLDFERPPAAPSAAPSPSASRDVASAGRDRLELAVAYMD
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHEEEEEECC
LGDKDTARGLLLEVAATGDDATRAEAAELLERLA
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHC
>Mature Secondary Structure
MHWPRMHAALRQCRWHSALHHGADFFAHPAAILMPMKHRGVGAMRPIQGIGALLLMACSG
CCCHHHHHHHHHHHHHHHHHHCCHHHHCCHHHEECHHHCCCCCCCHHHHHHHHHHHHHCC
AAMALGLGDIRVLSKPGQPLVAEIPVISNEPGELDNARVALASATTFARVGLERPQGLVS
CCEEECCCCEEEECCCCCCCEEECCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCHHHHH
NLQFQFAQDARGRAVIRVTSSQAVDQPAINFLIEVEWGQGRLVREYSALVDAPNTAAAIA
HHHHHHHCCCCCCEEEEECCCHHCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCHHHHH
EPAIEAPRAGSSNAIAREPAPVAAPAAQDNARAEPAARATGSASAASATQAGDTLPAVRA
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHCCCCCCHHHC
GQTLSEIAAAVARSSGHSLDQTMLALLRTNPDAFINGNINRLKQGAVLRTPQEDALAQVG
CCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCHHHHHCCCEECCCCHHHHHHHH
AAEAAVMVREQAAKWRQARSAVPQPAEAGAAAAATPPPATPAAAAGNGARLEIAPAVASQ
HHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHCC
TNKAGVTSGTSAEGEGEMAANQQLQQAKEDIATRDAELQDLRTRVADLEKLKQQQQALIA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
MKDSDLAAAQKRLSETPAAAQQGGGFPLWLIGGLVLIVAAVVAWLAARRRKPSPLPPLPR
CCCCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RQFDFVLPGAPVQAAEPQEATQATEPSEPDVVHETEFEQADLRDEERAHDAQQPLSDVLR
CCCCEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHH
REPLPSEPAAAPMAVNSDDWRALRAAPPVVATPPQDSAPVDAAQAPPHPASEAVEASHAD
CCCCCCCCCCCCEEECCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCC
VAPTIGDVPSTASPVAVATQDSLDFERPPAAPSAAPSPSASRDVASAGRDRLELAVAYMD
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHEEEEEECC
LGDKDTARGLLLEVAATGDDATRAEAAELLERLA
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA