| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is potG [H]
Identifier: 78048206
GI number: 78048206
Start: 2984839
End: 2985876
Strand: Reverse
Name: potG [H]
Synonym: XCV2650
Alternate gene names: 78048206
Gene position: 2985876-2984839 (Counterclockwise)
Preceding gene: 78048207
Following gene: 78048205
Centisome position: 57.66
GC content: 64.64
Gene sequence:
>1038_bases TTGCGGTCGACGACGTCAGCCTGCAGATTCGCAAGGGCGAGATCTTCGCGTTGCTCGGTGGTTCCGGTAGCGGCAAATCC ACGCTGCTGCGCTGCCTTGCCGGGTTCGAGCGGCCGACCAAGGGGGCGCATTGTCCTGGATGGTCAACCGATCGACGCAC TGCCGCCGTACGAGCGCCCGATCAACATGATGTTCCAGTCGTACGCGCTGTTTCCGCATATGAGTGTGGAGCAGAACATC GCCTTCGGGTTGAAGCAGGAAGGCTTGCCCAAGGCTGCGATCGCCAGCCGCGTCGGCGAGATGCTCGAACTGGTGCAGCT TGGCGCGCTGGCCAAGCGCAAGCCGCACCAGCTCTCCGGCGGGCAGCAGCAACGCGTGGCCCTGGCGCGCTCGCTGGCCA AGCGCCCCAAGCTGCTGTTGCTGGACGAACCGATGGGTGCGCTGGATAAAAAACTGCGCTCGCAGATGCAGCTGGAACTG GTCAACATCATCGAAACCTCCGGCGTGACCTGCGTCATGGTCACCCACGATCAGGAAGAGGCCATGACCATGGCCACCCG GATCGCGCTGATGGACCAGGGCTGGATCCAGCAGGTGGGCACGCCCGATGAAATCTACGAGCAGCCGGCCAACCGGTTTG CGGCCGAGTTCATCGGCTCGGTCAATCTGATCGATGCGCTCATCGCCGACGACGCGCCCGAGTACGTCACCTTGAAAACG CCGGCGTTCGATGCCTGCATCCGCATCGGCCACGGCATCACCGGCTTCGAAGGGCAGGCAGTGGCGTTCGCGCTGCGCCC GGAAAAGCTCGCCATCGGCAAGGACGAGCCGGCCCAGGCCTGCAACAAGGCCCAGGGCGTGATCGAAGACATCGCCTATT TCGGCAGCCACTCGGTCTACCACGTGCGCCTGCCCAGCGGGGTCAAGCTGATGGCCAATTTCGCCAATCGCCAGCGCTGG GCCAGCGAAGCGCTGACCTGGGGCGACACCGTGTGGGTCGGGTGGGGCGAAGACGACGGCGTGGTGCTCACCGCATGA
Upstream 100 bases:
>100_bases TCAATGGCATCCCCCGAGGCCACCCCGCAGCCCCACCTCACCGCTGGCGACGGCGGCTACCTGAGCATCGACGCGGTCCG CAAGGAGTTCGACGGCTTCG
Downstream 100 bases:
>100_bases GAGCGGCCAGCAAAACTACTGCGCAGCCGCCAGGGGGGCGCGGCCGGTGCTCGGAATCCTCATGTACCACTCGTACACTG CGGTTCCTGCGCGCCGTCCG
Product: putrescine ABC transporter ATP-binding protein
Products: ADP; phosphate; putrescine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MRSTTSACRFARARSSRCSVVPVAANPRCCAALPGSSGRPRGRIVLDGQPIDALPPYERPINMMFQSYALFPHMSVEQNI AFGLKQEGLPKAAIASRVGEMLELVQLGALAKRKPHQLSGGQQQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLEL VNIIETSGVTCVMVTHDQEEAMTMATRIALMDQGWIQQVGTPDEIYEQPANRFAAEFIGSVNLIDALIADDAPEYVTLKT PAFDACIRIGHGITGFEGQAVAFALRPEKLAIGKDEPAQACNKAQGVIEDIAYFGSHSVYHVRLPSGVKLMANFANRQRW ASEALTWGDTVWVGWGEDDGVVLTA
Sequences:
>Translated_345_residues MRSTTSACRFARARSSRCSVVPVAANPRCCAALPGSSGRPRGRIVLDGQPIDALPPYERPINMMFQSYALFPHMSVEQNI AFGLKQEGLPKAAIASRVGEMLELVQLGALAKRKPHQLSGGQQQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLEL VNIIETSGVTCVMVTHDQEEAMTMATRIALMDQGWIQQVGTPDEIYEQPANRFAAEFIGSVNLIDALIADDAPEYVTLKT PAFDACIRIGHGITGFEGQAVAFALRPEKLAIGKDEPAQACNKAQGVIEDIAYFGSHSVYHVRLPSGVKLMANFANRQRW ASEALTWGDTVWVGWGEDDGVVLTA >Mature_345_residues MRSTTSACRFARARSSRCSVVPVAANPRCCAALPGSSGRPRGRIVLDGQPIDALPPYERPINMMFQSYALFPHMSVEQNI AFGLKQEGLPKAAIASRVGEMLELVQLGALAKRKPHQLSGGQQQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLEL VNIIETSGVTCVMVTHDQEEAMTMATRIALMDQGWIQQVGTPDEIYEQPANRFAAEFIGSVNLIDALIADDAPEYVTLKT PAFDACIRIGHGITGFEGQAVAFALRPEKLAIGKDEPAQACNKAQGVIEDIAYFGSHSVYHVRLPSGVKLMANFANRQRW ASEALTWGDTVWVGWGEDDGVVLTA
Specific function: Part of the binding-protein-dependent transport system for putrescine. Probably responsible for energy coupling to the transport system [H]
COG id: COG3842
COG function: function code E; ABC-type spermidine/putrescine transport systems, ATPase components
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI171184400, Length=181, Percent_Identity=32.0441988950276, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI42741659, Length=182, Percent_Identity=30.2197802197802, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI9955968, Length=174, Percent_Identity=32.183908045977, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI9955966, Length=211, Percent_Identity=31.7535545023697, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI45243524, Length=211, Percent_Identity=31.7535545023697, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI255708477, Length=178, Percent_Identity=32.0224719101124, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI148612844, Length=178, Percent_Identity=32.0224719101124, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI150417984, Length=214, Percent_Identity=26.6355140186916, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI4505771, Length=182, Percent_Identity=30.2197802197802, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI9961252, Length=182, Percent_Identity=30.2197802197802, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI9961250, Length=196, Percent_Identity=29.5918367346939, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI105990541, Length=162, Percent_Identity=28.3950617283951, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI9665248, Length=207, Percent_Identity=29.951690821256, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI87081791, Length=304, Percent_Identity=59.2105263157895, Blast_Score=360, Evalue=1e-101, Organism=Escherichia coli, GI1787370, Length=248, Percent_Identity=48.7903225806452, Blast_Score=227, Evalue=7e-61, Organism=Escherichia coli, GI1787712, Length=311, Percent_Identity=40.8360128617363, Blast_Score=222, Evalue=2e-59, Organism=Escherichia coli, GI87082267, Length=301, Percent_Identity=37.8737541528239, Blast_Score=200, Evalue=9e-53, Organism=Escherichia coli, GI87081709, Length=269, Percent_Identity=39.4052044609665, Blast_Score=183, Evalue=1e-47, Organism=Escherichia coli, GI1790467, Length=283, Percent_Identity=37.1024734982332, Blast_Score=182, Evalue=2e-47, Organism=Escherichia coli, GI1788761, Length=200, Percent_Identity=46.5, Blast_Score=175, Evalue=3e-45, Organism=Escherichia coli, GI1789032, Length=213, Percent_Identity=39.906103286385, Blast_Score=148, Evalue=6e-37, Organism=Escherichia coli, GI1788450, Length=185, Percent_Identity=44.3243243243243, Blast_Score=142, Evalue=4e-35, Organism=Escherichia coli, GI1789672, Length=186, Percent_Identity=36.0215053763441, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1786563, Length=177, Percent_Identity=41.2429378531073, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1787029, Length=200, Percent_Identity=36, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1786398, Length=248, Percent_Identity=34.2741935483871, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1786253, Length=173, Percent_Identity=39.3063583815029, Blast_Score=108, Evalue=8e-25, Organism=Escherichia coli, GI1786872, Length=186, Percent_Identity=33.8709677419355, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1787089, Length=149, Percent_Identity=38.9261744966443, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1788225, Length=163, Percent_Identity=39.2638036809816, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI145693107, Length=233, Percent_Identity=31.3304721030043, Blast_Score=101, Evalue=7e-23, Organism=Escherichia coli, GI1787164, Length=150, Percent_Identity=41.3333333333333, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1790162, Length=189, Percent_Identity=35.4497354497354, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1788644, Length=199, Percent_Identity=33.1658291457286, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1787500, Length=170, Percent_Identity=31.1764705882353, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI48994883, Length=206, Percent_Identity=29.6116504854369, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI48994943, Length=177, Percent_Identity=32.7683615819209, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1787758, Length=149, Percent_Identity=34.2281879194631, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1789873, Length=161, Percent_Identity=36.6459627329193, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI87081834, Length=157, Percent_Identity=32.484076433121, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1788053, Length=139, Percent_Identity=38.1294964028777, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI87081782, Length=151, Percent_Identity=34.4370860927152, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1786703, Length=153, Percent_Identity=33.9869281045752, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1789891, Length=173, Percent_Identity=34.1040462427746, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788506, Length=190, Percent_Identity=26.8421052631579, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1787105, Length=131, Percent_Identity=35.8778625954198, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1789586, Length=162, Percent_Identity=36.4197530864198, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1786981, Length=189, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI48994997, Length=107, Percent_Identity=33.6448598130841, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1789963, Length=188, Percent_Identity=29.2553191489362, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1789962, Length=126, Percent_Identity=30.1587301587302, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1790739, Length=170, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1789593, Length=150, Percent_Identity=28.6666666666667, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1787547, Length=198, Percent_Identity=26.7676767676768, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1789864, Length=186, Percent_Identity=26.8817204301075, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789991, Length=180, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790544, Length=181, Percent_Identity=28.7292817679558, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790190, Length=186, Percent_Identity=26.8817204301075, Blast_Score=65, Evalue=5e-12, Organism=Caenorhabditis elegans, GI193211017, Length=198, Percent_Identity=31.8181818181818, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI71996809, Length=198, Percent_Identity=31.8181818181818, Blast_Score=85, Evalue=5e-17, Organism=Caenorhabditis elegans, GI193211015, Length=198, Percent_Identity=31.8181818181818, Blast_Score=85, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17558664, Length=210, Percent_Identity=31.4285714285714, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17543740, Length=174, Percent_Identity=32.7586206896552, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17565938, Length=217, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=8e-15, Organism=Caenorhabditis elegans, GI71984940, Length=170, Percent_Identity=31.7647058823529, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193208177, Length=182, Percent_Identity=29.1208791208791, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17541710, Length=180, Percent_Identity=32.7777777777778, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI212646699, Length=198, Percent_Identity=29.2929292929293, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17567265, Length=186, Percent_Identity=31.1827956989247, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI115535101, Length=185, Percent_Identity=31.8918918918919, Blast_Score=71, Evalue=8e-13, Organism=Caenorhabditis elegans, GI25146777, Length=237, Percent_Identity=29.535864978903, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115533608, Length=135, Percent_Identity=30.3703703703704, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115534520, Length=188, Percent_Identity=29.2553191489362, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17567269, Length=185, Percent_Identity=29.7297297297297, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71992290, Length=200, Percent_Identity=24.5, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17565586, Length=140, Percent_Identity=27.1428571428571, Blast_Score=68, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17569143, Length=99, Percent_Identity=38.3838383838384, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17533971, Length=171, Percent_Identity=29.2397660818713, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI115533592, Length=143, Percent_Identity=34.2657342657343, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24582014, Length=204, Percent_Identity=30.8823529411765, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24582012, Length=204, Percent_Identity=30.8823529411765, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24641565, Length=172, Percent_Identity=29.6511627906977, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI17136662, Length=174, Percent_Identity=28.735632183908, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI281362751, Length=134, Percent_Identity=34.3283582089552, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24650855, Length=136, Percent_Identity=33.8235294117647, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI24650853, Length=136, Percent_Identity=33.8235294117647, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI85725262, Length=148, Percent_Identity=31.7567567567568, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI24643674, Length=136, Percent_Identity=31.6176470588235, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI281363262, Length=176, Percent_Identity=31.8181818181818, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24659289, Length=174, Percent_Identity=29.8850574712644, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24653245, Length=176, Percent_Identity=31.8181818181818, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI85726357, Length=105, Percent_Identity=35.2380952380952, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR008995 - InterPro: IPR005893 - InterPro: IPR013611 [H]
Pfam domain/function: PF00005 ABC_tran; PF08402 TOBE_2 [H]
EC number: NA
Molecular weight: Translated: 37585; Mature: 37585
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTTSACRFARARSSRCSVVPVAANPRCCAALPGSSGRPRGRIVLDGQPIDALPPYERP CCCCHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCHH INMMFQSYALFPHMSVEQNIAFGLKQEGLPKAAIASRVGEMLELVQLGALAKRKPHQLSG HHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GQQQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVNIIETSGVTCVMVTHDQEE CHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHH AMTMATRIALMDQGWIQQVGTPDEIYEQPANRFAAEFIGSVNLIDALIADDAPEYVTLKT HHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEC PAFDACIRIGHGITGFEGQAVAFALRPEKLAIGKDEPAQACNKAQGVIEDIAYFGSHSVY CHHHHHHHHCCCCCCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEE HVRLPSGVKLMANFANRQRWASEALTWGDTVWVGWGEDDGVVLTA EEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEC >Mature Secondary Structure MRSTTSACRFARARSSRCSVVPVAANPRCCAALPGSSGRPRGRIVLDGQPIDALPPYERP CCCCHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCHH INMMFQSYALFPHMSVEQNIAFGLKQEGLPKAAIASRVGEMLELVQLGALAKRKPHQLSG HHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GQQQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVNIIETSGVTCVMVTHDQEE CHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHH AMTMATRIALMDQGWIQQVGTPDEIYEQPANRFAAEFIGSVNLIDALIADDAPEYVTLKT HHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEC PAFDACIRIGHGITGFEGQAVAFALRPEKLAIGKDEPAQACNKAQGVIEDIAYFGSHSVY CHHHHHHHHCCCCCCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEE HVRLPSGVKLMANFANRQRWASEALTWGDTVWVGWGEDDGVVLTA EEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; putrescine [Periplasm]; H2O [C]
Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8416922; 8905232; 9278503 [H]