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The map label for this gene is potH [H]

Identifier: 78048205

GI number: 78048205

Start: 2983799

End: 2984842

Strand: Reverse

Name: potH [H]

Synonym: XCV2649

Alternate gene names: 78048205

Gene position: 2984842-2983799 (Counterclockwise)

Preceding gene: 78048206

Following gene: 78048204

Centisome position: 57.64

GC content: 63.12

Gene sequence:

>1044_bases
ATGAGAGCGGCCAGCAAAACTACTGCGCAGCCGCCAGGGGGGCGCGGCCGGTGCTCGGAATCCTCATGTACCACTCGTAC
ACTGCGGTTCCTGCGCGCCGTCCGCGCCCCCCTGGCGGCTGCTCGCTACGTTCTGCTAGCCACTCTTAGCCGTGGCTTGC
CGGGCGCGCGCTGGGGCGTGATCGCCGCACCGTATCTATGGCTGCTGGTGTTCTTCGCGATTCCGTTTTTGATCGTGCTG
AAGATTTCCTTCGCCGAGCGCGCCACCGCGATGCCGCCGTATACGCCGCTATTGGCGGTTGCTGCCGACGGTGCGGTGAG
CCTCAAACTGCATCTGGGCAACTATCTGGCCTTGCTGCGCGACAGCCAGTACGTGGCTGCGTACCTGAGTTCGATCAAGA
TCGCGGCCATTTCCACGGCGCTTGCGTTGTTGATCGGTTATCCGATGGCGTATGTGATCGCGCGCCTGCCGCTGGCCACA
CGCAACGTGGCGATGATGCTGGTGGTGCTGCCGTCGTGGACCTCGTTTTTGATCCGCGTATACGCGTGGATCGGCATTCT
CGATGGCAATGGCGTGCTCAATCAGGTGCTGTTGGCGCTGGGTGTGATCAAGCAGCCGTTGCAGTTGTTGTACACGCCGA
TCGCCGCCTATATCGGCATCGTGTACTGCTATCTGCCGTTCATGGTGTTGCCGCTGTACGCCAACCTGGTCAAGCACGAT
CAGCGCCTGCTCGAAGCGGCCTACGACCTGGGCGCGCGGCCATGGCAGGCGTTCGCGCGCATCACCTTGCCCCTATCGCG
CAACGGCATCGTGGCCGGCTGCATGCTGGTGATGATTCCGGCGGTGGGCGAGTTCGTCATCCCGGAAATGCTCGGCGGGC
CGAACACCCTGATGATCGGGCGCGTGCTGTGGGGCGAGTTCTTCAATAACCGCGACTGGCCGGTGGCAGCGGCCGTGGCC
ACGGTGATGCTGTTGCTGCTGTTGCTGCCGATCGTGATCTTCCACCGCTACCAGCAGCGTGAGCTGGAAGGGCGGCTGAC
ATGA

Upstream 100 bases:

>100_bases
CCAATTTCGCCAATCGCCAGCGCTGGGCCAGCGAAGCGCTGACCTGGGGCGACACCGTGTGGGTCGGGTGGGGCGAAGAC
GACGGCGTGGTGCTCACCGC

Downstream 100 bases:

>100_bases
TGCGCGCTTCGCGCGGTGGGCGCCTGCTCGGCGGCAGCGTGCTCGCGCTGGGTTTCGGCTTCCTGTACCTGCCGATCCTG
TTGTTGATGGTGTATTCGTT

Product: putrescine ABC transporter permease

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MRAASKTTAQPPGGRGRCSESSCTTRTLRFLRAVRAPLAAARYVLLATLSRGLPGARWGVIAAPYLWLLVFFAIPFLIVL
KISFAERATAMPPYTPLLAVAADGAVSLKLHLGNYLALLRDSQYVAAYLSSIKIAAISTALALLIGYPMAYVIARLPLAT
RNVAMMLVVLPSWTSFLIRVYAWIGILDGNGVLNQVLLALGVIKQPLQLLYTPIAAYIGIVYCYLPFMVLPLYANLVKHD
QRLLEAAYDLGARPWQAFARITLPLSRNGIVAGCMLVMIPAVGEFVIPEMLGGPNTLMIGRVLWGEFFNNRDWPVAAAVA
TVMLLLLLLPIVIFHRYQQRELEGRLT

Sequences:

>Translated_347_residues
MRAASKTTAQPPGGRGRCSESSCTTRTLRFLRAVRAPLAAARYVLLATLSRGLPGARWGVIAAPYLWLLVFFAIPFLIVL
KISFAERATAMPPYTPLLAVAADGAVSLKLHLGNYLALLRDSQYVAAYLSSIKIAAISTALALLIGYPMAYVIARLPLAT
RNVAMMLVVLPSWTSFLIRVYAWIGILDGNGVLNQVLLALGVIKQPLQLLYTPIAAYIGIVYCYLPFMVLPLYANLVKHD
QRLLEAAYDLGARPWQAFARITLPLSRNGIVAGCMLVMIPAVGEFVIPEMLGGPNTLMIGRVLWGEFFNNRDWPVAAAVA
TVMLLLLLLPIVIFHRYQQRELEGRLT
>Mature_347_residues
MRAASKTTAQPPGGRGRCSESSCTTRTLRFLRAVRAPLAAARYVLLATLSRGLPGARWGVIAAPYLWLLVFFAIPFLIVL
KISFAERATAMPPYTPLLAVAADGAVSLKLHLGNYLALLRDSQYVAAYLSSIKIAAISTALALLIGYPMAYVIARLPLAT
RNVAMMLVVLPSWTSFLIRVYAWIGILDGNGVLNQVLLALGVIKQPLQLLYTPIAAYIGIVYCYLPFMVLPLYANLVKHD
QRLLEAAYDLGARPWQAFARITLPLSRNGIVAGCMLVMIPAVGEFVIPEMLGGPNTLMIGRVLWGEFFNNRDWPVAAAVA
TVMLLLLLLPIVIFHRYQQRELEGRLT

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine [H]

COG id: COG1176

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component I

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787080, Length=283, Percent_Identity=62.1908127208481, Blast_Score=334, Evalue=6e-93,
Organism=Escherichia coli, GI1787369, Length=282, Percent_Identity=40.0709219858156, Blast_Score=199, Evalue=2e-52,
Organism=Escherichia coli, GI1787713, Length=246, Percent_Identity=30.0813008130081, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38052; Mature: 38052

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS00071 GAPDH ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAASKTTAQPPGGRGRCSESSCTTRTLRFLRAVRAPLAAARYVLLATLSRGLPGARWGV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
IAAPYLWLLVFFAIPFLIVLKISFAERATAMPPYTPLLAVAADGAVSLKLHLGNYLALLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCEEEEEEHHHHHHHHH
DSQYVAAYLSSIKIAAISTALALLIGYPMAYVIARLPLATRNVAMMLVVLPSWTSFLIRV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
YAWIGILDGNGVLNQVLLALGVIKQPLQLLYTPIAAYIGIVYCYLPFMVLPLYANLVKHD
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRLLEAAYDLGARPWQAFARITLPLSRNGIVAGCMLVMIPAVGEFVIPEMLGGPNTLMIG
HHHHHHHHHCCCCHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RVLWGEFFNNRDWPVAAAVATVMLLLLLLPIVIFHRYQQRELEGRLT
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRAASKTTAQPPGGRGRCSESSCTTRTLRFLRAVRAPLAAARYVLLATLSRGLPGARWGV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
IAAPYLWLLVFFAIPFLIVLKISFAERATAMPPYTPLLAVAADGAVSLKLHLGNYLALLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCEEEEEEHHHHHHHHH
DSQYVAAYLSSIKIAAISTALALLIGYPMAYVIARLPLATRNVAMMLVVLPSWTSFLIRV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
YAWIGILDGNGVLNQVLLALGVIKQPLQLLYTPIAAYIGIVYCYLPFMVLPLYANLVKHD
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRLLEAAYDLGARPWQAFARITLPLSRNGIVAGCMLVMIPAVGEFVIPEMLGGPNTLMIG
HHHHHHHHHCCCCHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RVLWGEFFNNRDWPVAAAVATVMLLLLLLPIVIFHRYQQRELEGRLT
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8416922; 8905232; 9278503 [H]