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The map label for this gene is adrA [H]

Identifier: 78047100

GI number: 78047100

Start: 1744200

End: 1745174

Strand: Reverse

Name: adrA [H]

Synonym: XCV1544

Alternate gene names: 78047100

Gene position: 1745174-1744200 (Counterclockwise)

Preceding gene: 78047102

Following gene: 78047094

Centisome position: 33.7

GC content: 65.74

Gene sequence:

>975_bases
GTGATCCTCCACCTGCGGCGGGATTTCCGACTCGGCATCGTCAAGATGCTCGGGCCAATCACCGCGCTGTTGCTTTGCCT
CTATGCGGTGTACCTGGCCATGACCGGTCAGGCAGTTGCGTGTCTGGTCACCGCGGCGCTGGGCGTGCTCGCGGTATGGC
GCGGCTGGCAGATGCGCAGTGCCGAAGACACCGGCGCCGGCGGCGTGTGGCTGGCGTCGATCAATGTTGGCGGGTGCCTG
GTGGCGTGCTGGACCGGTGGCGTTGGCGCCCTGCCGTGGCTGTTCCCGGTGCTGGCCACCAATTATTTCTTGTGCGGGCC
GCGGCGCGCGGTGTTGTTGAGCTTGCCGCTGCTGGCCGCCTTGTTGTTCTTGCCCGGCTTGATCACCAGCCCCGGCCAGG
GTGTGTCGACGATCGTGGTGACGCTGGTGACGCTGGCGGTGGGCTACGCGTTTTCGCTGCGGATGCAGGACGACCGCGTG
CATCTGGAAGAACTGGCCTCGCTGGACGCGCTGACCGGCTTGCCCAACCGTCGCATGCTGGAACGTGCGCTGACCCACCA
GATCGATCAACGCCAACCGCACGACCGGCTCAACAGCCTGATCATCCTGGATCTGGATCACTTCAAGGAGGTCAACGATC
TGTACGGGCACGCCGCCGGCGATGCGGCGCTCTCGGATCTGGCCACCATCCTGCGCTTCGAAGTCCGCGAACCGCACCAG
GTGTTCCGTTTTGGCGGCGAAGAATTCGTGGTGCTGCTGCGTGCCGGCTCGCTGGCCGAACTGGAAGCGGCCACCGAACG
CTTGCGCAAGGTGATACGCAACGGCTTGCGCGGACCCGGTGGGCGTATCACCGTCTCGCTGGGCGCGGCGCGCCACGATG
GCGAAACGCATTGGCAGGACTGGTTTTCGCGTGCCGATGCAGCGCTGTATCTGGCCAAGAACGGCGGACGCGACAGCGTG
CGGGTCGCCGAATAA

Upstream 100 bases:

>100_bases
CTGCAACGCTTCACTTTCCTACCCATTGCGGTGATGAAGACACGCTCAACTTTGACCGCACTCCGCCGATAATGATGCCG
ACTCCTATAGAACCTTCCCT

Downstream 100 bases:

>100_bases
GCGCCTGGCGGTATGCCTGCGCAGGGGTCCGCCTGGGCACACGCAGCTGGCAGTTGGGTAATCGCATTGGTCACGAATGC
GATGGTGCTGATGAAGCGGC

Product: putative signal transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MILHLRRDFRLGIVKMLGPITALLLCLYAVYLAMTGQAVACLVTAALGVLAVWRGWQMRSAEDTGAGGVWLASINVGGCL
VACWTGGVGALPWLFPVLATNYFLCGPRRAVLLSLPLLAALLFLPGLITSPGQGVSTIVVTLVTLAVGYAFSLRMQDDRV
HLEELASLDALTGLPNRRMLERALTHQIDQRQPHDRLNSLIILDLDHFKEVNDLYGHAAGDAALSDLATILRFEVREPHQ
VFRFGGEEFVVLLRAGSLAELEAATERLRKVIRNGLRGPGGRITVSLGAARHDGETHWQDWFSRADAALYLAKNGGRDSV
RVAE

Sequences:

>Translated_324_residues
MILHLRRDFRLGIVKMLGPITALLLCLYAVYLAMTGQAVACLVTAALGVLAVWRGWQMRSAEDTGAGGVWLASINVGGCL
VACWTGGVGALPWLFPVLATNYFLCGPRRAVLLSLPLLAALLFLPGLITSPGQGVSTIVVTLVTLAVGYAFSLRMQDDRV
HLEELASLDALTGLPNRRMLERALTHQIDQRQPHDRLNSLIILDLDHFKEVNDLYGHAAGDAALSDLATILRFEVREPHQ
VFRFGGEEFVVLLRAGSLAELEAATERLRKVIRNGLRGPGGRITVSLGAARHDGETHWQDWFSRADAALYLAKNGGRDSV
RVAE
>Mature_324_residues
MILHLRRDFRLGIVKMLGPITALLLCLYAVYLAMTGQAVACLVTAALGVLAVWRGWQMRSAEDTGAGGVWLASINVGGCL
VACWTGGVGALPWLFPVLATNYFLCGPRRAVLLSLPLLAALLFLPGLITSPGQGVSTIVVTLVTLAVGYAFSLRMQDDRV
HLEELASLDALTGLPNRRMLERALTHQIDQRQPHDRLNSLIILDLDHFKEVNDLYGHAAGDAALSDLATILRFEVREPHQ
VFRFGGEEFVVLLRAGSLAELEAATERLRKVIRNGLRGPGGRITVSLGAARHDGETHWQDWFSRADAALYLAKNGGRDSV
RVAE

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=184, Percent_Identity=34.7826086956522, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI87081881, Length=166, Percent_Identity=42.1686746987952, Blast_Score=101, Evalue=7e-23,
Organism=Escherichia coli, GI1787816, Length=174, Percent_Identity=36.7816091954023, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI145693134, Length=159, Percent_Identity=35.2201257861635, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1787262, Length=325, Percent_Identity=26.4615384615385, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI87082007, Length=158, Percent_Identity=37.3417721518987, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1788381, Length=163, Percent_Identity=35.5828220858896, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1787541, Length=157, Percent_Identity=35.031847133758, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87081974, Length=147, Percent_Identity=27.891156462585, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI87081977, Length=163, Percent_Identity=31.9018404907975, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1787056, Length=156, Percent_Identity=28.2051282051282, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1787802, Length=306, Percent_Identity=28.1045751633987, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI87081921, Length=193, Percent_Identity=24.8704663212435, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR007894 [H]

Pfam domain/function: PF00990 GGDEF; PF05230 MASE2 [H]

EC number: NA

Molecular weight: Translated: 35278; Mature: 35278

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILHLRRDFRLGIVKMLGPITALLLCLYAVYLAMTGQAVACLVTAALGVLAVWRGWQMRS
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC
AEDTGAGGVWLASINVGGCLVACWTGGVGALPWLFPVLATNYFLCGPRRAVLLSLPLLAA
CCCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHH
LLFLPGLITSPGQGVSTIVVTLVTLAVGYAFSLRMQDDRVHLEELASLDALTGLPNRRML
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCCCHHHH
ERALTHQIDQRQPHDRLNSLIILDLDHFKEVNDLYGHAAGDAALSDLATILRFEVREPHQ
HHHHHHHHHCCCCHHHHCCEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH
VFRFGGEEFVVLLRAGSLAELEAATERLRKVIRNGLRGPGGRITVSLGAARHDGETHWQD
HHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHH
WFSRADAALYLAKNGGRDSVRVAE
HHHHCCEEEEEECCCCCCCCEECC
>Mature Secondary Structure
MILHLRRDFRLGIVKMLGPITALLLCLYAVYLAMTGQAVACLVTAALGVLAVWRGWQMRS
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC
AEDTGAGGVWLASINVGGCLVACWTGGVGALPWLFPVLATNYFLCGPRRAVLLSLPLLAA
CCCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHH
LLFLPGLITSPGQGVSTIVVTLVTLAVGYAFSLRMQDDRVHLEELASLDALTGLPNRRML
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCCCHHHH
ERALTHQIDQRQPHDRLNSLIILDLDHFKEVNDLYGHAAGDAALSDLATILRFEVREPHQ
HHHHHHHHHCCCCHHHHCCEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH
VFRFGGEEFVVLLRAGSLAELEAATERLRKVIRNGLRGPGGRITVSLGAARHDGETHWQD
HHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHH
WFSRADAALYLAKNGGRDSVRVAE
HHHHCCEEEEEECCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]