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The map label for this gene is papD2

Identifier: 78047039

GI number: 78047039

Start: 1667852

End: 1668622

Strand: Reverse

Name: papD2

Synonym: XCV1483

Alternate gene names: NA

Gene position: 1668622-1667852 (Counterclockwise)

Preceding gene: 78047040

Following gene: 78047038

Centisome position: 32.22

GC content: 67.83

Gene sequence:

>771_bases
ATGCCTGTGCATCACCGCCCGTTGTCACGTTTACCTGCCTGGCTGATGTCGGCCGGGCTGGCGATGACGCTGGTCATGGC
CAACGGCGCCCTGCCGACGCCGGCGCATGCCGCCAGCCTGCAGTTGGCACCCACATCGCTGAGCCTGAGCGCCCAGCAGA
CCGCCGACGGCCTGTGGCTGAGCAACAGCGGCAGCGCGCCGGTACAGGTGCAGACCCGCGCCTATCGCTGGACCCAGCGC
GATGGGCAGGATCAGCTCGACCCCACCCAGGATCTGCTGGTCAGCCCGCCGATGCGCACCCTGGCCGCTGGCGAGCGCCA
GTTGATCCGGGTCATCCGCGCCGGGCCTGCCCCGAGCGGGCAGGAGCAGTGTTACCGCATCATCGTCGACGAGTTGCCCA
GTGCCGATGCCGACCGCAAAGGCATGCAGTTCGTGCTGCGTTATTCGGTGCCGATCTTCCTGCTGCCGCCCGGCAACACC
GAACCCTCGCCGACCCTGAGCGCGCAGGTGGTTGCCGGCAGCGATGGCAAGGCGCAGATCCAGATCAGCAACACCGGCAC
CGGCCATGCGCAGGTCGCCGACCTGCGGCACCAGGTCGATGGCGCAACCAAGACCGCGTTGAACGGCTTGGTCGGTTATG
TACTGCCCGGGCAGACCATGCGTTGGTCGCTGAGTGCGCCGCTGGCGCAGTTCGGCCGCGGCACCATCATCGCAAGGATC
AATGGTGAGGCTGACGAACGTACCTTGTTGGCCGCGCCGACGGCGCCTTGA

Upstream 100 bases:

>100_bases
ACCCGGTCTACGGCCGCGTGACCAACCCGTCGGCCAACAATCCTGCGACCGGTAGTTACCAGGACACGATCACTGCCACG
ATCGTCTATTGAGCCCGCGC

Downstream 100 bases:

>100_bases
TGCGGCGCGGCTGGCGATGACGCTCCTTGCGACCGCCAGTTGCCTGGGCAGCGCCGCAGCCGGCGATCTGGCCGATGTGA
CGTCGCTTCCCGATCAGCCG

Product: pili assembly chaperone

Products: NA

Alternate protein names: Type 1 Pili Usher Pathway Chaperone CsuC; P Pilus Assembly Protein Chaperone PapD-Like Protein; Fimbrial Chaperone; CsuC Protein; Pili Assembly Chaperone Transmembrane Protein; P Pilus Assembly Protein Chaperone PapD-Like; Chaperone Protein; Fimbrial Chaperone Protein; P Pilus Assembly Protein Chaperone PapD; Chaperone Protein EcpD; Pilus Assembly Protein Chaperone PapD; Chaperone Protein PmfD; Exported Fimbriae-Related Chaperone; Pilus Assembly Protein; CsuC Protein Fimbrial Chaperone Proteins; Putataive Fimbrial Chaperone Protein; Type I Pili; Fimbrial Assembly Chaperone; Pili Assembly Chaperone Transmembrane Protein Papd-Like; PilP Assembly Chaperone Transmembrane Protein; Fimbriae-Assembly Chaperone; Type 1 Pilus Chaperone FimC; Fimbriae Chaperone; Chaperone Protein MrkB; Type 1 Pili Usher Pathway Chaperone; Type I Pilus Usher Pathway Chaperone CsuC; Pili Assembly Chaperone N-Terminal; Pilus Assembly Chaperone; Pili Assembly Chaperone Protein

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MPVHHRPLSRLPAWLMSAGLAMTLVMANGALPTPAHAASLQLAPTSLSLSAQQTADGLWLSNSGSAPVQVQTRAYRWTQR
DGQDQLDPTQDLLVSPPMRTLAAGERQLIRVIRAGPAPSGQEQCYRIIVDELPSADADRKGMQFVLRYSVPIFLLPPGNT
EPSPTLSAQVVAGSDGKAQIQISNTGTGHAQVADLRHQVDGATKTALNGLVGYVLPGQTMRWSLSAPLAQFGRGTIIARI
NGEADERTLLAAPTAP

Sequences:

>Translated_256_residues
MPVHHRPLSRLPAWLMSAGLAMTLVMANGALPTPAHAASLQLAPTSLSLSAQQTADGLWLSNSGSAPVQVQTRAYRWTQR
DGQDQLDPTQDLLVSPPMRTLAAGERQLIRVIRAGPAPSGQEQCYRIIVDELPSADADRKGMQFVLRYSVPIFLLPPGNT
EPSPTLSAQVVAGSDGKAQIQISNTGTGHAQVADLRHQVDGATKTALNGLVGYVLPGQTMRWSLSAPLAQFGRGTIIARI
NGEADERTLLAAPTAP
>Mature_255_residues
PVHHRPLSRLPAWLMSAGLAMTLVMANGALPTPAHAASLQLAPTSLSLSAQQTADGLWLSNSGSAPVQVQTRAYRWTQRD
GQDQLDPTQDLLVSPPMRTLAAGERQLIRVIRAGPAPSGQEQCYRIIVDELPSADADRKGMQFVLRYSVPIFLLPPGNTE
PSPTLSAQVVAGSDGKAQIQISNTGTGHAQVADLRHQVDGATKTALNGLVGYVLPGQTMRWSLSAPLAQFGRGTIIARIN
GEADERTLLAAPTAP

Specific function: Unknown

COG id: COG3121

COG function: function code NU; P pilus assembly protein, chaperone PapD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27175; Mature: 27044

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVHHRPLSRLPAWLMSAGLAMTLVMANGALPTPAHAASLQLAPTSLSLSAQQTADGLWL
CCCCCCCHHHHHHHHHHCCHHEEEEEECCCCCCCCCCCEEEECCCEEECCHHHCCCCEEE
SNSGSAPVQVQTRAYRWTQRDGQDQLDPTQDLLVSPPMRTLAAGERQLIRVIRAGPAPSG
ECCCCCCEEEEEEEEEECCCCCCCCCCCCHHHEECCCHHHHHCCHHHHHHHHHCCCCCCC
QEQCYRIIVDELPSADADRKGMQFVLRYSVPIFLLPPGNTEPSPTLSAQVVAGSDGKAQI
HHHHHHHHHHHCCCCCCCHHHHHEEEEECCCEEEECCCCCCCCCCEEEEEEECCCCEEEE
QISNTGTGHAQVADLRHQVDGATKTALNGLVGYVLPGQTMRWSLSAPLAQFGRGTIIARI
EEECCCCCCHHHHHHHHHHCCHHHHHHHHHEEEEECCCCEEEECCCCHHHCCCCEEEEEE
NGEADERTLLAAPTAP
CCCCCCCEEEECCCCC
>Mature Secondary Structure 
PVHHRPLSRLPAWLMSAGLAMTLVMANGALPTPAHAASLQLAPTSLSLSAQQTADGLWL
CCCCCCHHHHHHHHHHCCHHEEEEEECCCCCCCCCCCEEEECCCEEECCHHHCCCCEEE
SNSGSAPVQVQTRAYRWTQRDGQDQLDPTQDLLVSPPMRTLAAGERQLIRVIRAGPAPSG
ECCCCCCEEEEEEEEEECCCCCCCCCCCCHHHEECCCHHHHHCCHHHHHHHHHCCCCCCC
QEQCYRIIVDELPSADADRKGMQFVLRYSVPIFLLPPGNTEPSPTLSAQVVAGSDGKAQI
HHHHHHHHHHHCCCCCCCHHHHHEEEEECCCEEEECCCCCCCCCCEEEEEEECCCCEEEE
QISNTGTGHAQVADLRHQVDGATKTALNGLVGYVLPGQTMRWSLSAPLAQFGRGTIIARI
EEECCCCCCHHHHHHHHHHCCHHHHHHHHHEEEEECCCCEEEECCCCHHHCCCCEEEEEE
NGEADERTLLAAPTAP
CCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA