Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
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Accession | NC_007508 |
Length | 5,178,466 |
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The map label for this gene is pru [H]
Identifier: 78047040
GI number: 78047040
Start: 1668631
End: 1669155
Strand: Reverse
Name: pru [H]
Synonym: XCV1484
Alternate gene names: 78047040
Gene position: 1669155-1668631 (Counterclockwise)
Preceding gene: 78047047
Following gene: 78047039
Centisome position: 32.23
GC content: 63.81
Gene sequence:
>525_bases ATGCGTACTGTCCGCCCTGTCCTGCTATCGCTCGGCCTGCTTTCGACCATTGGCATGGCGAGCGCGGCAGACACCACCAC CTTCAACGTCAAGATCGCGGTCACCAAGGCCTGCACGATCACCGCCGCATCCGCCACGGACGTCGACTTCGGCTCGGTAC TCTCGACCTCGACCGCCAATGCGGACGCCAACGGCAGCGTGACGGCCCAGTGCACCGCATTGACGCCGTACAACATCGCA CTGAGCGCGGGCAGCAATGCCGGGACTGCCAACGACGTCACCACCCGCCGCATGAAAAATACCGACGCGCTGGTGACCAC CAACAACTACATCGCCTACCAGCTCTACCAGGATCTGGGCCGCAGCACGGTCTGGGGCAGCACCACCGGCACCAACACGC TCAGCCGCACCGCCACCGGCCTGAACCAGGTCTACCCGGTCTACGGCCGCGTGACCAACCCGTCGGCCAACAATCCTGCG ACCGGTAGTTACCAGGACACGATCACTGCCACGATCGTCTATTGA
Upstream 100 bases:
>100_bases AGCGTGTGAATTCGGCGTTATGTTTGGCACAGCTGATGCATTGCAGGGAAGGCGACGACTCGTCGCGTCATCAATGACCA GAACGGTCAAGGAAATGTCC
Downstream 100 bases:
>100_bases GCCCGCGCATGCCTGTGCATCACCGCCCGTTGTCACGTTTACCTGCCTGGCTGATGTCGGCCGGGCTGGCGATGACGCTG GTCATGGCCAACGGCGCCCT
Product: putative secreted protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MRTVRPVLLSLGLLSTIGMASAADTTTFNVKIAVTKACTITAASATDVDFGSVLSTSTANADANGSVTAQCTALTPYNIA LSAGSNAGTANDVTTRRMKNTDALVTTNNYIAYQLYQDLGRSTVWGSTTGTNTLSRTATGLNQVYPVYGRVTNPSANNPA TGSYQDTITATIVY
Sequences:
>Translated_174_residues MRTVRPVLLSLGLLSTIGMASAADTTTFNVKIAVTKACTITAASATDVDFGSVLSTSTANADANGSVTAQCTALTPYNIA LSAGSNAGTANDVTTRRMKNTDALVTTNNYIAYQLYQDLGRSTVWGSTTGTNTLSRTATGLNQVYPVYGRVTNPSANNPA TGSYQDTITATIVY >Mature_174_residues MRTVRPVLLSLGLLSTIGMASAADTTTFNVKIAVTKACTITAASATDVDFGSVLSTSTANADANGSVTAQCTALTPYNIA LSAGSNAGTANDVTTRRMKNTDALVTTNNYIAYQLYQDLGRSTVWGSTTGTNTLSRTATGLNQVYPVYGRVTNPSANNPA TGSYQDTITATIVY
Specific function: A late-developmental spore coat protein [H]
COG id: COG5430
COG function: function code S; Uncharacterized secreted protein
Gene ontology:
Cell location: Secreted. Spore wall, perispore. Note=Secreted across the membrane to assemble on the spore surface [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007893 [H]
Pfam domain/function: PF05229 SCPU [H]
EC number: NA
Molecular weight: Translated: 18038; Mature: 18038
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTVRPVLLSLGLLSTIGMASAADTTTFNVKIAVTKACTITAASATDVDFGSVLSTSTAN CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCHHEECCCCC ADANGSVTAQCTALTPYNIALSAGSNAGTANDVTTRRMKNTDALVTTNNYIAYQLYQDLG CCCCCCEEEEEEEECCEEEEEECCCCCCCCCCCHHHHCCCCCEEEEECCEEEEEEHHHCC RSTVWGSTTGTNTLSRTATGLNQVYPVYGRVTNPSANNPATGSYQDTITATIVY CCEECCCCCCCCCHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MRTVRPVLLSLGLLSTIGMASAADTTTFNVKIAVTKACTITAASATDVDFGSVLSTSTAN CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCHHEECCCCC ADANGSVTAQCTALTPYNIALSAGSNAGTANDVTTRRMKNTDALVTTNNYIAYQLYQDLG CCCCCCEEEEEEEECCEEEEEECCCCCCCCCCCHHHHCCCCCEEEEECCEEEEEEHHHCC RSTVWGSTTGTNTLSRTATGLNQVYPVYGRVTNPSANNPATGSYQDTITATIVY CCEECCCCCCCCCHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1904442 [H]