Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
---|---|
Accession | NC_007503 |
Length | 2,401,520 |
Click here to switch to the map view.
The map label for this gene is ylxH [H]
Identifier: 78045153
GI number: 78045153
Start: 893023
End: 893898
Strand: Direct
Name: ylxH [H]
Synonym: CHY_1011
Alternate gene names: 78045153
Gene position: 893023-893898 (Clockwise)
Preceding gene: 78042670
Following gene: 78044241
Centisome position: 37.19
GC content: 40.18
Gene sequence:
>876_bases ATGTACCGGCAGGCGGTGGGATTAATTAAAGGTAATAAAGGTAATAAAGGGGAAGCAAAAGAAAATGCTACTCTGCAGCG GATAATTGCGGTAACCAGCGGTAAAGGCGGAGTGGGCAAATCGAATTTCACGGCCAATTTAGCACTCGCGCTGGCCGATT TACAGAAAAAAATTTTAATTTTGGATGCGGATTTAGGCCTGGCCAATGTGGAGCTCCTTTTTGGTGTTATTCCCCGCTGT ACGCTTTTGGATTATTTAAACAGCGAAAAAAATATTGAGGATTTAATCACGCCATTACAAAATAATGTCGATTTAATTTC CGGCGGTGCCGGACTTTTAGAACTGGCTTCGTTAAATGTAAAACAAAGGAAAAAAATTATCCAGTTAATTGAAAATCTTC CCCAAAATTATGATATAATCTTAATTGATACCGGTGCCGGGATCCATAAGGAAGTAATGAGCTTTGTTGCGGCAGCCCGG GAAGTAGTGTTAATTATTACTCCCGAACCTACATCAATAACCGATGCTTATACGATGCTGAAAATGTTAGCTCGGTACCA GCTTAAGCAAAAAATCTACCTGGTGGTGAACCGCGTTCGGGATGAAAAAGAGGGCGAAAAAATTGCCGAACGCATTACAC TTGCCGCCAATAAATTTCTAAACCTCAATATTGAAAAATTGGGGTACCTATTGGAAGACCGCTCCCTTTCCGAAGCGGTA AGGCAGATGAAACCGTTTTATTTGCAATTTCCCAATAGTTTGGTCACCAGAAACTTGAAAAAAATTGCCCTAAAGCTTAC TTCAGATAAATTAATCGAACAAAAAACCGACGGTTTTGCCGGATTTTTCACCAAGCTTTTAAGAATTTTTGGATAG
Upstream 100 bases:
>100_bases GCCAATCGTTTACTTGGGCGTTGGGCAAAATGTTCCCGATGACTTAATATCTGCTACCCCGGAGCTTATCGTCGAGCAGG TGTGGAAGGGGTGGTAGGAG
Downstream 100 bases:
>100_bases GTGATTTATGTTGCAGGAGTTTTTAAAACTTGAGCTTTATCCCAACCCGGCGGTAAAAAAAAGCTTTCCGGCGCAGGTTC AGGAGGTTAAAGAAAAAACC
Product: putative flagellar biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MYRQAVGLIKGNKGNKGEAKENATLQRIIAVTSGKGGVGKSNFTANLALALADLQKKILILDADLGLANVELLFGVIPRC TLLDYLNSEKNIEDLITPLQNNVDLISGGAGLLELASLNVKQRKKIIQLIENLPQNYDIILIDTGAGIHKEVMSFVAAAR EVVLIITPEPTSITDAYTMLKMLARYQLKQKIYLVVNRVRDEKEGEKIAERITLAANKFLNLNIEKLGYLLEDRSLSEAV RQMKPFYLQFPNSLVTRNLKKIALKLTSDKLIEQKTDGFAGFFTKLLRIFG
Sequences:
>Translated_291_residues MYRQAVGLIKGNKGNKGEAKENATLQRIIAVTSGKGGVGKSNFTANLALALADLQKKILILDADLGLANVELLFGVIPRC TLLDYLNSEKNIEDLITPLQNNVDLISGGAGLLELASLNVKQRKKIIQLIENLPQNYDIILIDTGAGIHKEVMSFVAAAR EVVLIITPEPTSITDAYTMLKMLARYQLKQKIYLVVNRVRDEKEGEKIAERITLAANKFLNLNIEKLGYLLEDRSLSEAV RQMKPFYLQFPNSLVTRNLKKIALKLTSDKLIEQKTDGFAGFFTKLLRIFG >Mature_291_residues MYRQAVGLIKGNKGNKGEAKENATLQRIIAVTSGKGGVGKSNFTANLALALADLQKKILILDADLGLANVELLFGVIPRC TLLDYLNSEKNIEDLITPLQNNVDLISGGAGLLELASLNVKQRKKIIQLIENLPQNYDIILIDTGAGIHKEVMSFVAAAR EVVLIITPEPTSITDAYTMLKMLARYQLKQKIYLVVNRVRDEKEGEKIAERITLAANKFLNLNIEKLGYLLEDRSLSEAV RQMKPFYLQFPNSLVTRNLKKIALKLTSDKLIEQKTDGFAGFFTKLLRIFG
Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest
COG id: COG0455
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787423, Length=294, Percent_Identity=25.8503401360544, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 32330; Mature: 32330
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRQAVGLIKGNKGNKGEAKENATLQRIIAVTSGKGGVGKSNFTANLALALADLQKKILI CCCHHEEEEECCCCCCCCCHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHCEEEE LDADLGLANVELLFGVIPRCTLLDYLNSEKNIEDLITPLQNNVDLISGGAGLLELASLNV EECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHCCH KQRKKIIQLIENLPQNYDIILIDTGAGIHKEVMSFVAAAREVVLIITPEPTSITDAYTML HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHH KMLARYQLKQKIYLVVNRVRDEKEGEKIAERITLAANKFLNLNIEKLGYLLEDRSLSEAV HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHH RQMKPFYLQFPNSLVTRNLKKIALKLTSDKLIEQKTDGFAGFFTKLLRIFG HHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC >Mature Secondary Structure MYRQAVGLIKGNKGNKGEAKENATLQRIIAVTSGKGGVGKSNFTANLALALADLQKKILI CCCHHEEEEECCCCCCCCCHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHCEEEE LDADLGLANVELLFGVIPRCTLLDYLNSEKNIEDLITPLQNNVDLISGGAGLLELASLNV EECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHCCH KQRKKIIQLIENLPQNYDIILIDTGAGIHKEVMSFVAAAREVVLIITPEPTSITDAYTML HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHH KMLARYQLKQKIYLVVNRVRDEKEGEKIAERITLAANKFLNLNIEKLGYLLEDRSLSEAV HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHH RQMKPFYLQFPNSLVTRNLKKIALKLTSDKLIEQKTDGFAGFFTKLLRIFG HHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7987014; 9384377 [H]