Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
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Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is 78044241
Identifier: 78044241
GI number: 78044241
Start: 893906
End: 894553
Strand: Direct
Name: 78044241
Synonym: CHY_1012
Alternate gene names: NA
Gene position: 893906-894553 (Clockwise)
Preceding gene: 78045153
Following gene: 78044674
Centisome position: 37.22
GC content: 42.44
Gene sequence:
>648_bases ATGTTGCAGGAGTTTTTAAAACTTGAGCTTTATCCCAACCCGGCGGTAAAAAAAAGCTTTCCGGCGCAGGTTCAGGAGGT TAAAGAAAAAACCTTTCTAATTCTTGGACCTTTTGACCGGGGTACTTTGCTTTTCCTGTATCCTGCCCAGGAAGTTTTAA TTGAATACGTTGCCGAAGAGTGCCGTTATCAATTTTCTACCCGGGTAGTACGCCGGTTGCAAAAGCCTTTTTTCGGTTAC GAGTTACTGCTTCCGGCTCCCGATGAGATACAAAGGATTCAGTTACGCCGTTATGTTCGGGTGAAAAAGGTTTTGGATGT TTTTTATGCTCTGGTTAAGAAGGATGAGGAATTAAACTGGAAAAAGGGGAAATCGGTAGACATAAGTATTGGCGGAATTA AGCTGGCAACTAACGAGCCTTTGTCCGTGGATGCCTGTGTAAAGCTTCGATTTTACATAGAATTGAAAGGTAATGTTGTG GAATTTGTACTGGATGGTTTGGTCAAACGGGAAGAAAAAAAAGAAAACCATGTGTATCATTACGGAATTGAATTTGTAAA CATCAGCCGACAGGAGCAGGATACACTTTTTGCGTATTTGTTCCAGGAAATGCAGAAGTCGCGAAGGATGTTGGCCGATG GGAAGTGA
Upstream 100 bases:
>100_bases ATTGCCCTAAAGCTTACTTCAGATAAATTAATCGAACAAAAAACCGACGGTTTTGCCGGATTTTTCACCAAGCTTTTAAG AATTTTTGGATAGGTGATTT
Downstream 100 bases:
>100_bases GAGCTTGGATGTGGCCGGTTTGTGGAGGGAATATCGGCGAAATAAATCATTGCAACTGAGAAATGAGTTGCTGGAATATT ACCTGCCTTTGGTCCGCAAG
Product: putative flagellar protein
Products: NA
Alternate protein names: Flagellar Protein; Glycosyltransferase-Like; Glycosyltransferase
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MLQEFLKLELYPNPAVKKSFPAQVQEVKEKTFLILGPFDRGTLLFLYPAQEVLIEYVAEECRYQFSTRVVRRLQKPFFGY ELLLPAPDEIQRIQLRRYVRVKKVLDVFYALVKKDEELNWKKGKSVDISIGGIKLATNEPLSVDACVKLRFYIELKGNVV EFVLDGLVKREEKKENHVYHYGIEFVNISRQEQDTLFAYLFQEMQKSRRMLADGK
Sequences:
>Translated_215_residues MLQEFLKLELYPNPAVKKSFPAQVQEVKEKTFLILGPFDRGTLLFLYPAQEVLIEYVAEECRYQFSTRVVRRLQKPFFGY ELLLPAPDEIQRIQLRRYVRVKKVLDVFYALVKKDEELNWKKGKSVDISIGGIKLATNEPLSVDACVKLRFYIELKGNVV EFVLDGLVKREEKKENHVYHYGIEFVNISRQEQDTLFAYLFQEMQKSRRMLADGK >Mature_215_residues MLQEFLKLELYPNPAVKKSFPAQVQEVKEKTFLILGPFDRGTLLFLYPAQEVLIEYVAEECRYQFSTRVVRRLQKPFFGY ELLLPAPDEIQRIQLRRYVRVKKVLDVFYALVKKDEELNWKKGKSVDISIGGIKLATNEPLSVDACVKLRFYIELKGNVV EFVLDGLVKREEKKENHVYHYGIEFVNISRQEQDTLFAYLFQEMQKSRRMLADGK
Specific function: Unknown
COG id: COG5581
COG function: function code M; Predicted glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25321; Mature: 25321
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQEFLKLELYPNPAVKKSFPAQVQEVKEKTFLILGPFDRGTLLFLYPAQEVLIEYVAEE CCCHHEEEEECCCCCCCCCCCHHHHHHHHCEEEEECCCCCCEEEEEECHHHHHHHHHHHH CRYQFSTRVVRRLQKPFFGYELLLPAPDEIQRIQLRRYVRVKKVLDVFYALVKKDEELNW HHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KKGKSVDISIGGIKLATNEPLSVDACVKLRFYIELKGNVVEFVLDGLVKREEKKENHVYH CCCCEEEEEECCEEEECCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEE YGIEFVNISRQEQDTLFAYLFQEMQKSRRMLADGK EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLQEFLKLELYPNPAVKKSFPAQVQEVKEKTFLILGPFDRGTLLFLYPAQEVLIEYVAEE CCCHHEEEEECCCCCCCCCCCHHHHHHHHCEEEEECCCCCCEEEEEECHHHHHHHHHHHH CRYQFSTRVVRRLQKPFFGYELLLPAPDEIQRIQLRRYVRVKKVLDVFYALVKKDEELNW HHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KKGKSVDISIGGIKLATNEPLSVDACVKLRFYIELKGNVVEFVLDGLVKREEKKENHVYH CCCCEEEEEECCEEEECCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEE YGIEFVNISRQEQDTLFAYLFQEMQKSRRMLADGK EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA