Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is 78045132

Identifier: 78045132

GI number: 78045132

Start: 870544

End: 871638

Strand: Direct

Name: 78045132

Synonym: CHY_0982

Alternate gene names: NA

Gene position: 870544-871638 (Clockwise)

Preceding gene: 78044274

Following gene: 78044592

Centisome position: 36.25

GC content: 29.59

Gene sequence:

>1095_bases
ATGGGAGAAAAAAAACTATCGGTTTGCATGATTGTAAAAGACGAGGAAAGATATATTAGAAATTGCCTTGAGAGTGTGCA
AGATATTGCTGATGAAATTGTTGTTGTCGATACGGGATCTACAGATAATACTAAAGCTATAGCTAATGATTTTGGGGCGA
AAATTTTTGATTTTCCGTGGGTTGATGATTTCAGTGCAGCAAGGAACTTTTCGTTGGAAAAAGCAACAGGTGATTGGGTT
TTACTTTTAGATGCTGATGAAGAATTAGATGTTAGTAGCAAGGATAAAGTGTTGGAGCTAGTTAATAAAAATGAAAATGT
TGCTTATTTAGTCAATGTAATTAATTTCCTGGATTTTACAAAACAAAGAACAGTTACAGCCAAAAGAATGCTTTTATTTC
CTATGCGAGCTGAACCATACTTTATTAATCCTATTCACGAGCAACTACGTTTCAAAAAAAATGTTGAAATTAGAGATAGT
ACCATTATTATAAAACACTACGGTTATATTCCAGAAACTGTTTCTACTAAAAAGAAAAGTGAGCGGAATATATCAATTCT
TAAAAAAATAGCCAATAACTCTGTTGAAAATATTAATGTTGAAATTAAAGCATTCAATTATTACAATCTTGGTGTAGAGT
ATTATAGAAAACAAGAATACGAAAAAGCTTTACAAAATTTCCAAAAGTCTTTTTTATTGATACGTAAAAAAGAACCAGGC
TTTAAGTATGCTTTAATTTGGCATATTGTTAATTCATTAATAAATTTAAAAAAATTTCAAGAGGCTTTAAAGGTTATTGA
AGATGCCGAACAGTTATATCCTTGGTATGTTGATTTAGTGTATTTTAAAGGAGTTGTTTATTATAGTCAAAGAAGCTATA
AGAAAGCTATTGAAACTTTTATGAAATGTCTCGAAATTGGTGAAAGCTTAGAAACTTCAATATTTCATTATGATGGTACT
GGTTCTTATTTAGCAAGTTATGGAATTGGTAGTTGCGAAGAAGCTTTAGGCAATTATAATAAAGCTTTAGTTTTTTATGA
AATGTCTTTGGCACAAAATTATATTTTAGCTGTAATCCCTATTTTGAAGTTGTAA

Upstream 100 bases:

>100_bases
AGCGGTTTTACAGCTTCTCCGATAAACAAATACATTTTATCTTTTGGGCCAGCCATTTTAAGGGCTGGCCTCTTTAAAAT
TTGCTTAAAGTGGTGAAAAA

Downstream 100 bases:

>100_bases
TATGAACGGGGGAGTTACCGTGAATTGGAAGAAAAGGAAGATAAATTACTTCGAAAATATAAGGACTATTCTTTTATAAT
CGAAAAATACGTTGATTTTC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MGEKKLSVCMIVKDEERYIRNCLESVQDIADEIVVVDTGSTDNTKAIANDFGAKIFDFPWVDDFSAARNFSLEKATGDWV
LLLDADEELDVSSKDKVLELVNKNENVAYLVNVINFLDFTKQRTVTAKRMLLFPMRAEPYFINPIHEQLRFKKNVEIRDS
TIIIKHYGYIPETVSTKKKSERNISILKKIANNSVENINVEIKAFNYYNLGVEYYRKQEYEKALQNFQKSFLLIRKKEPG
FKYALIWHIVNSLINLKKFQEALKVIEDAEQLYPWYVDLVYFKGVVYYSQRSYKKAIETFMKCLEIGESLETSIFHYDGT
GSYLASYGIGSCEEALGNYNKALVFYEMSLAQNYILAVIPILKL

Sequences:

>Translated_364_residues
MGEKKLSVCMIVKDEERYIRNCLESVQDIADEIVVVDTGSTDNTKAIANDFGAKIFDFPWVDDFSAARNFSLEKATGDWV
LLLDADEELDVSSKDKVLELVNKNENVAYLVNVINFLDFTKQRTVTAKRMLLFPMRAEPYFINPIHEQLRFKKNVEIRDS
TIIIKHYGYIPETVSTKKKSERNISILKKIANNSVENINVEIKAFNYYNLGVEYYRKQEYEKALQNFQKSFLLIRKKEPG
FKYALIWHIVNSLINLKKFQEALKVIEDAEQLYPWYVDLVYFKGVVYYSQRSYKKAIETFMKCLEIGESLETSIFHYDGT
GSYLASYGIGSCEEALGNYNKALVFYEMSLAQNYILAVIPILKL
>Mature_363_residues
GEKKLSVCMIVKDEERYIRNCLESVQDIADEIVVVDTGSTDNTKAIANDFGAKIFDFPWVDDFSAARNFSLEKATGDWVL
LLDADEELDVSSKDKVLELVNKNENVAYLVNVINFLDFTKQRTVTAKRMLLFPMRAEPYFINPIHEQLRFKKNVEIRDST
IIIKHYGYIPETVSTKKKSERNISILKKIANNSVENINVEIKAFNYYNLGVEYYRKQEYEKALQNFQKSFLLIRKKEPGF
KYALIWHIVNSLINLKKFQEALKVIEDAEQLYPWYVDLVYFKGVVYYSQRSYKKAIETFMKCLEIGESLETSIFHYDGTG
SYLASYGIGSCEEALGNYNKALVFYEMSLAQNYILAVIPILKL

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00535 Glycos_transf_2; PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 42202; Mature: 42071

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEKKLSVCMIVKDEERYIRNCLESVQDIADEIVVVDTGSTDNTKAIANDFGAKIFDFPW
CCCCCEEEEEEEECHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHCCCEECCCC
VDDFSAARNFSLEKATGDWVLLLDADEELDVSSKDKVLELVNKNENVAYLVNVINFLDFT
CCCHHHHHCCCEEECCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
KQRTVTAKRMLLFPMRAEPYFINPIHEQLRFKKNVEIRDSTIIIKHYGYIPETVSTKKKS
HHHHHHHHHHEEEECCCCCEEECHHHHHHHHHCCCEEECCEEEEEECCCCCCHHHHHHHC
ERNISILKKIANNSVENINVEIKAFNYYNLGVEYYRKQEYEKALQNFQKSFLLIRKKEPG
CCHHHHHHHHHCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHEEEEEECCCC
FKYALIWHIVNSLINLKKFQEALKVIEDAEQLYPWYVDLVYFKGVVYYSQRSYKKAIETF
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHH
MKCLEIGESLETSIFHYDGTGSYLASYGIGSCEEALGNYNKALVFYEMSLAQNYILAVIP
HHHHHHCCCHHHEEEEECCCCHHHHHCCCCCHHHHHCCCCCEEEEEEHHHHHHHHHHHHH
ILKL
HHCC
>Mature Secondary Structure 
GEKKLSVCMIVKDEERYIRNCLESVQDIADEIVVVDTGSTDNTKAIANDFGAKIFDFPW
CCCCEEEEEEEECHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHCCCEECCCC
VDDFSAARNFSLEKATGDWVLLLDADEELDVSSKDKVLELVNKNENVAYLVNVINFLDFT
CCCHHHHHCCCEEECCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
KQRTVTAKRMLLFPMRAEPYFINPIHEQLRFKKNVEIRDSTIIIKHYGYIPETVSTKKKS
HHHHHHHHHHEEEECCCCCEEECHHHHHHHHHCCCEEECCEEEEEECCCCCCHHHHHHHC
ERNISILKKIANNSVENINVEIKAFNYYNLGVEYYRKQEYEKALQNFQKSFLLIRKKEPG
CCHHHHHHHHHCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHEEEEEECCCC
FKYALIWHIVNSLINLKKFQEALKVIEDAEQLYPWYVDLVYFKGVVYYSQRSYKKAIETF
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHH
MKCLEIGESLETSIFHYDGTGSYLASYGIGSCEEALGNYNKALVFYEMSLAQNYILAVIP
HHHHHHCCCHHHEEEEECCCCHHHHHCCCCCHHHHHCCCCCEEEEEEHHHHHHHHHHHHH
ILKL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8123787 [H]