| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
Click here to switch to the map view.
The map label for this gene is 78044592
Identifier: 78044592
GI number: 78044592
Start: 871663
End: 872541
Strand: Direct
Name: 78044592
Synonym: CHY_0983
Alternate gene names: NA
Gene position: 871663-872541 (Clockwise)
Preceding gene: 78045132
Following gene: 78045089
Centisome position: 36.3
GC content: 29.01
Gene sequence:
>879_bases TTGGAAGAAAAGGAAGATAAATTACTTCGAAAATATAAGGACTATTCTTTTATAATCGAAAAATACGTTGATTTTCTGTT TTTAAAAGGCGATTATGAAAGAGCTTTAAAGGTAGTAAATAGTTATTTGTCAGACCAAACGAACAAATTAATAAAAGAAG CTGAATTGTATCTTCATCTGAAAAAATATGAAGAAGCCAAAGAAGTCATAGAAAAACTTGAGGGTCAAAATTTAAATGAA AACCATTTAATGATTAAAACTTTTCTACAAATATTATTAAATTTAAGTCTTAAATCTAAAACTGAAGAAATAGTTTGGAA TATGAAAAAACTTACTCGAGCAGAGGAAATAAAGTGGCAAATAATAGGTAAGTTGTTGCTTGCGGCATTTAACAGTGAGG TAATAAAAATTTTGAAAAACGACTATGAAAAGTATGAAGAGCAACTTACTTTTTTAATGGCAAAGTTTTTAGATTTAGAG TTATTTGAAGCATTTGAAAAAATTTATAATTTATTTCAAAAAATCGAATGGATTGAAGGGAAAAATTTAAAACTTGGCAA GCTGTACTTTGCTACAAGGTATTATGACAGTGCTGTGGAAGAATTGTTGGCTTCGGTTGAAAAAGGTGTTGCAGATGCGG AAGCTTTTTATCTCTTAGGGAAAATAGCCCATATGCGTGGTTTAATCGAGGAAGCTGAAACATTTATCAAAGAAGCAATA AGTAGGGAAAAGCAGTTAAGTTATTATTTATATCTAATTGGTTTATTACAAGAAAAAAACGATTTAAAATCTACAAAAGA AGTTTTGCAAGAAGCTTCGACGTACTATCCCGATGTTGAGATTTTAAAATCTGCGTTGCAAGTTTATAGTTCATTATAA
Upstream 100 bases:
>100_bases TAAAGCTTTAGTTTTTTATGAAATGTCTTTGGCACAAAATTATATTTTAGCTGTAATCCCTATTTTGAAGTTGTAATATG AACGGGGGAGTTACCGTGAA
Downstream 100 bases:
>100_bases TTAAAAGGGGAATGGAGTATGGCTGGCTTAGTTCCTCCGGTAAATTTAGGAGTGAATAATGGGGTTAATTTTCAATCGAT AGGAATTATAGTAAGTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MEEKEDKLLRKYKDYSFIIEKYVDFLFLKGDYERALKVVNSYLSDQTNKLIKEAELYLHLKKYEEAKEVIEKLEGQNLNE NHLMIKTFLQILLNLSLKSKTEEIVWNMKKLTRAEEIKWQIIGKLLLAAFNSEVIKILKNDYEKYEEQLTFLMAKFLDLE LFEAFEKIYNLFQKIEWIEGKNLKLGKLYFATRYYDSAVEELLASVEKGVADAEAFYLLGKIAHMRGLIEEAETFIKEAI SREKQLSYYLYLIGLLQEKNDLKSTKEVLQEASTYYPDVEILKSALQVYSSL
Sequences:
>Translated_292_residues MEEKEDKLLRKYKDYSFIIEKYVDFLFLKGDYERALKVVNSYLSDQTNKLIKEAELYLHLKKYEEAKEVIEKLEGQNLNE NHLMIKTFLQILLNLSLKSKTEEIVWNMKKLTRAEEIKWQIIGKLLLAAFNSEVIKILKNDYEKYEEQLTFLMAKFLDLE LFEAFEKIYNLFQKIEWIEGKNLKLGKLYFATRYYDSAVEELLASVEKGVADAEAFYLLGKIAHMRGLIEEAETFIKEAI SREKQLSYYLYLIGLLQEKNDLKSTKEVLQEASTYYPDVEILKSALQVYSSL >Mature_292_residues MEEKEDKLLRKYKDYSFIIEKYVDFLFLKGDYERALKVVNSYLSDQTNKLIKEAELYLHLKKYEEAKEVIEKLEGQNLNE NHLMIKTFLQILLNLSLKSKTEEIVWNMKKLTRAEEIKWQIIGKLLLAAFNSEVIKILKNDYEKYEEQLTFLMAKFLDLE LFEAFEKIYNLFQKIEWIEGKNLKLGKLYFATRYYDSAVEELLASVEKGVADAEAFYLLGKIAHMRGLIEEAETFIKEAI SREKQLSYYLYLIGLLQEKNDLKSTKEVLQEASTYYPDVEILKSALQVYSSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34514; Mature: 34514
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEKEDKLLRKYKDYSFIIEKYVDFLFLKGDYERALKVVNSYLSDQTNKLIKEAELYLHL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKYEEAKEVIEKLEGQNLNENHLMIKTFLQILLNLSLKSKTEEIVWNMKKLTRAEEIKWQ HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIGKLLLAAFNSEVIKILKNDYEKYEEQLTFLMAKFLDLELFEAFEKIYNLFQKIEWIEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KNLKLGKLYFATRYYDSAVEELLASVEKGVADAEAFYLLGKIAHMRGLIEEAETFIKEAI CCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SREKQLSYYLYLIGLLQEKNDLKSTKEVLQEASTYYPDVEILKSALQVYSSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MEEKEDKLLRKYKDYSFIIEKYVDFLFLKGDYERALKVVNSYLSDQTNKLIKEAELYLHL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKYEEAKEVIEKLEGQNLNENHLMIKTFLQILLNLSLKSKTEEIVWNMKKLTRAEEIKWQ HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIGKLLLAAFNSEVIKILKNDYEKYEEQLTFLMAKFLDLELFEAFEKIYNLFQKIEWIEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KNLKLGKLYFATRYYDSAVEELLASVEKGVADAEAFYLLGKIAHMRGLIEEAETFIKEAI CCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SREKQLSYYLYLIGLLQEKNDLKSTKEVLQEASTYYPDVEILKSALQVYSSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA