Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is 78044763

Identifier: 78044763

GI number: 78044763

Start: 1080378

End: 1080683

Strand: Direct

Name: 78044763

Synonym: CHY_1217

Alternate gene names: NA

Gene position: 1080378-1080683 (Clockwise)

Preceding gene: 78044254

Following gene: 78042727

Centisome position: 44.99

GC content: 32.68

Gene sequence:

>306_bases
ATGGATATCTTTAAGCGGAGTATTTTATTAGGTTTAGGTTTGATAACTCTTACGAAAGAAAAAACCGAGGAGTTTTTGAA
GGAATTAATGGAAAAAGGGAAAATGAGCAAAGATGAAGCCCAGAGTTTTCTAAATGAAATAATTGAAAAAGGCAAAACCC
ACAAGGACGAATTAAAAGCGGAAATAAAAGAGGAATTGCAAAAAATAGTTAAAGAGTTAAACTTAGTAACGCGGGATGAA
CTAAAGCTTTTAGAAAACCGCTTAAATGAATTAGAAAATAAAATCCAGGAACAAAACAGGGGGTAG

Upstream 100 bases:

>100_bases
AAATTTAAAAAAGCAAGGTATAACATGTTTATTTAAAGAATAAAATAGTGGTATGCAATTAAATTTTATGTTATAATTTG
CCATAAGGAGAGTGATATTT

Downstream 100 bases:

>100_bases
CAACCCCTTGTTTTTTTAAGGGGGATCAATTGTGTTTCCTTTAACACCAAAGCACCTTTCAAGGTTTCGTGAAATTGCCC
GTATTTTTACTGAATTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MDIFKRSILLGLGLITLTKEKTEEFLKELMEKGKMSKDEAQSFLNEIIEKGKTHKDELKAEIKEELQKIVKELNLVTRDE
LKLLENRLNELENKIQEQNRG

Sequences:

>Translated_101_residues
MDIFKRSILLGLGLITLTKEKTEEFLKELMEKGKMSKDEAQSFLNEIIEKGKTHKDELKAEIKEELQKIVKELNLVTRDE
LKLLENRLNELENKIQEQNRG
>Mature_101_residues
MDIFKRSILLGLGLITLTKEKTEEFLKELMEKGKMSKDEAQSFLNEIIEKGKTHKDELKAEIKEELQKIVKELNLVTRDE
LKLLENRLNELENKIQEQNRG

Specific function: Unknown

COG id: COG3937

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11869; Mature: 11869

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIFKRSILLGLGLITLTKEKTEEFLKELMEKGKMSKDEAQSFLNEIIEKGKTHKDELKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHH
EIKEELQKIVKELNLVTRDELKLLENRLNELENKIQEQNRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDIFKRSILLGLGLITLTKEKTEEFLKELMEKGKMSKDEAQSFLNEIIEKGKTHKDELKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHH
EIKEELQKIVKELNLVTRDELKLLENRLNELENKIQEQNRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA