Click here to switch to the map view.

The map label for this gene is albA [H]

Identifier: 78044427

GI number: 78044427

Start: 1077411

End: 1078406

Strand: Direct

Name: albA [H]

Synonym: CHY_1211

Alternate gene names: 78044427

Gene position: 1077411-1078406 (Clockwise)

Preceding gene: 78045155

Following gene: 78044254

Centisome position: 44.86

GC content: 43.07

Gene sequence:

>996_bases
ATGTTAGTTTCCTGGAATACCACCAATCAATGCAATTTGTATTGTGAACATTGTTACCGGGATGCGGGAGCAAAGGTTGA
AGAAGAACTATCTACTGAGGAAGGTAAGGCATTAATTGATGAAATCGTTAAAGCCGGGTTTAAGATAATGATATTTTCCG
GGGGCGAGCCTTTAATGCGGGAAGATATCCTTGAACTGGTAGATTATGCTTCCCAAAAAGGCTTAAAACCGGTTTTTGGT
ACTAATGGCACTTTAATTACCCTGGAAATGGCGCAAAAGCTCAAAAAAGCCGGAGCTTTAGCTATGGGAATTAGCTTGGA
TAGCGTTGACCCCGAAAAACACGACCGTTTTCGGGCTTCTCCCGGTTCTTGGGAAAAGGCTGTGGAAGGGATGAAAAATT
GTAAAGCTGCAGGGTTACCCTTTCAAATTCACACTACAGTGGTGGAATGGAATTACGATGAGGTAGAGCAATTAACCGAT
TTTGCCGTAGAAATAGGTGCAATAGCTCATCATATCTTCTTTTTAGTTCCAACCGGACGTGCGGTAAATATTGAGCAGGA
GTCTTTAAGGGCTGAACAGTACGAAAAACTTCTTCATCGTATAATGAAAAAGCAAAAGGAAGTCCCTATTGAATTAAAAC
CTACCTGTGCTCCCCAGTTTATGCGGATTGCCAAACAAATGGGCATGGATTTGCGGTTTGGAAGAGGCTGCCTGGCGGGA
ATTTCTTACTGCATTATAAGCCCTAAAGGCGATGTGCAACCGTGTGCCTATCTTAATATTCCCTTAGGTAACGTAAGGGA
AGTACCGTTTAGTGAAATCTGGAAAAATAATCCGGTTTTAAACGAGCTGCGTACATTAAACTATAAGGGTGGATGCGGTA
CCTGTAAATACAAAGAAATTTGTGGCGGTTGTCGGGCTCGGGCTTATTTCTACCATGATGGCGATTACATGGCTGAAGAG
CCGTGGTGCCTATACCAGGGGCGTAAGGGATATTAA

Upstream 100 bases:

>100_bases
TGTATTGGAGATCTTAACCTCAATGAAACGGGCCGGAGCAGATTTAATCATTTCTTATCATGCTAAAGATGTTGTTAAAT
GGCTAAAGGAGGCAAAATAA

Downstream 100 bases:

>100_bases
AAGTAAGGAGTGAGAGAATGCCTTTAAAAATCGATAGATCAATCGAAGCTTTTAGCGAAGCTAAGAAAGTTATTCCCGGA
GGAGTTAATAGTCCCGTTCG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MLVSWNTTNQCNLYCEHCYRDAGAKVEEELSTEEGKALIDEIVKAGFKIMIFSGGEPLMREDILELVDYASQKGLKPVFG
TNGTLITLEMAQKLKKAGALAMGISLDSVDPEKHDRFRASPGSWEKAVEGMKNCKAAGLPFQIHTTVVEWNYDEVEQLTD
FAVEIGAIAHHIFFLVPTGRAVNIEQESLRAEQYEKLLHRIMKKQKEVPIELKPTCAPQFMRIAKQMGMDLRFGRGCLAG
ISYCIISPKGDVQPCAYLNIPLGNVREVPFSEIWKNNPVLNELRTLNYKGGCGTCKYKEICGGCRARAYFYHDGDYMAEE
PWCLYQGRKGY

Sequences:

>Translated_331_residues
MLVSWNTTNQCNLYCEHCYRDAGAKVEEELSTEEGKALIDEIVKAGFKIMIFSGGEPLMREDILELVDYASQKGLKPVFG
TNGTLITLEMAQKLKKAGALAMGISLDSVDPEKHDRFRASPGSWEKAVEGMKNCKAAGLPFQIHTTVVEWNYDEVEQLTD
FAVEIGAIAHHIFFLVPTGRAVNIEQESLRAEQYEKLLHRIMKKQKEVPIELKPTCAPQFMRIAKQMGMDLRFGRGCLAG
ISYCIISPKGDVQPCAYLNIPLGNVREVPFSEIWKNNPVLNELRTLNYKGGCGTCKYKEICGGCRARAYFYHDGDYMAEE
PWCLYQGRKGY
>Mature_331_residues
MLVSWNTTNQCNLYCEHCYRDAGAKVEEELSTEEGKALIDEIVKAGFKIMIFSGGEPLMREDILELVDYASQKGLKPVFG
TNGTLITLEMAQKLKKAGALAMGISLDSVDPEKHDRFRASPGSWEKAVEGMKNCKAAGLPFQIHTTVVEWNYDEVEQLTD
FAVEIGAIAHHIFFLVPTGRAVNIEQESLRAEQYEKLLHRIMKKQKEVPIELKPTCAPQFMRIAKQMGMDLRFGRGCLAG
ISYCIISPKGDVQPCAYLNIPLGNVREVPFSEIWKNNPVLNELRTLNYKGGCGTCKYKEICGGCRARAYFYHDGDYMAEE
PWCLYQGRKGY

Specific function: Required for production of the bacteriocin subtilosin. May activate a metalloenzyme that catalyzes a modification of prosubtilosin [H]

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI22027536, Length=174, Percent_Identity=29.8850574712644, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI116734668, Length=174, Percent_Identity=29.8850574712644, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR008792
- InterPro:   IPR007197 [H]

Pfam domain/function: PF05402 PqqD; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37258; Mature: 37258

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVSWNTTNQCNLYCEHCYRDAGAKVEEELSTEEGKALIDEIVKAGFKIMIFSGGEPLMR
CEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHH
EDILELVDYASQKGLKPVFGTNGTLITLEMAQKLKKAGALAMGISLDSVDPEKHDRFRAS
HHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHCCCEEEECEECCCCCHHHHCCCCC
PGSWEKAVEGMKNCKAAGLPFQIHTTVVEWNYDEVEQLTDFAVEIGAIAHHIFFLVPTGR
CCCHHHHHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEECCC
AVNIEQESLRAEQYEKLLHRIMKKQKEVPIELKPTCAPQFMRIAKQMGMDLRFGRGCLAG
EECCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCCCCCCHHHHC
ISYCIISPKGDVQPCAYLNIPLGNVREVPFSEIWKNNPVLNELRTLNYKGGCGTCKYKEI
CEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHH
CGGCRARAYFYHDGDYMAEEPWCLYQGRKGY
CCCHHEEEEEEECCCCCCCCCEEECCCCCCC
>Mature Secondary Structure
MLVSWNTTNQCNLYCEHCYRDAGAKVEEELSTEEGKALIDEIVKAGFKIMIFSGGEPLMR
CEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHH
EDILELVDYASQKGLKPVFGTNGTLITLEMAQKLKKAGALAMGISLDSVDPEKHDRFRAS
HHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHCCCEEEECEECCCCCHHHHCCCCC
PGSWEKAVEGMKNCKAAGLPFQIHTTVVEWNYDEVEQLTDFAVEIGAIAHHIFFLVPTGR
CCCHHHHHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEECCC
AVNIEQESLRAEQYEKLLHRIMKKQKEVPIELKPTCAPQFMRIAKQMGMDLRFGRGCLAG
EECCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCCCCCCHHHHC
ISYCIISPKGDVQPCAYLNIPLGNVREVPFSEIWKNNPVLNELRTLNYKGGCGTCKYKEI
CEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHH
CGGCRARAYFYHDGDYMAEEPWCLYQGRKGY
CCCHHEEEEEEECCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377; 10572140; 10809709; 10809710 [H]