Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
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Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is hisC1
Identifier: 78044277
GI number: 78044277
Start: 962768
End: 963817
Strand: Direct
Name: hisC1
Synonym: CHY_1086
Alternate gene names: 78044277
Gene position: 962768-963817 (Clockwise)
Preceding gene: 78044940
Following gene: 78042790
Centisome position: 40.09
GC content: 41.33
Gene sequence:
>1050_bases ATGAATAAGCCGAGATATTTTAAAGAAGCCTTTGCCCAGCTAAAGCCCTACGAACCTCATCTGGTTTCCTATGAAATTAA ACTTGATGCCAATGAAAACCCGTATCTTTTTCCAAAAAGTTTACTGGAAGAAATCTTCTCCAAAATTGGGACAAGGGATT TTCCCCTTTATCCCGATCCCTTGGCTGGGAGGCTTCGTATTAGACTCTCGGAAAAGCTTGGGGTTTTGCCGGAAAATATA GTTTTAGGAAATGGTTCCGATGAGTTGATTCTTTGCCTTTATTTAGCCTTTGGGGGATACGGGAGGATTGCCTTAAGTTT TTCTCCTTCCTTTGTGATGTATCGACACCATGCTTTTGTAACCCAAACGGAATTTTTCGAAGTTTCGTACCGGGATGATT TTAGCCTTGATCTGGATGAAACGAAAAAAGCCATTGAAAAGTATCAACCCCATTTAGTGTTTCTGGCCAATCCCAATAAC CCGACGGGAACCCTGGTGGATATAGAAACGATTAAAAAGCTTTTAGCTTACGACCATTTGCTGGTAGTGGATGAGGCGTA CGTGGAATTTTCGGGAGTTTCGGCGATAGATTTATTAAAAAAATATCAAAACCTTGTTATTTTGCGGACCTTTTCCAAAG CCCGGGCTCTGGCCGGCTTAAGGTTGGGATATTTAGTTGCCAGCGTTGATGTGGTAAAGGAAATTATCAAGGTAAAAAAT CCCTATAATGTAAATGTTTTTTCCCAGATTGCCGGGGAAGTGGTTTTGGCCAACGAAGAAGTTTTTCAAGGGGAAATTAA AGAAATCGTAGCCGAAAGGGAAAGGCTTTATAACCAGTTAGCTTCTTTGGGTTTAAAGCCGGTGAAAAGCCACGCTAATT TTATACTGGTGGAATTCGGGGAAAAGGCAAAAAAGATTCACCAGGAGTTAATTAACCACGGAATTTTAGTGCGGTACTTG GGAGGAGCCCTTGCTAATTATTTACGGATAACCGTTGGTACACCGGAAGAAAACCGGCAACTTTTAAAGAAACTGGGGGA AATCTTATGA
Upstream 100 bases:
>100_bases TCCCAAGAAGGTTTTTTGGCCGATGCCAGGGATGTTATTAAACTTGCCGAAACGGAAGGGCTATTTGCCCACGCCCTTTC GGTGAAAGTGAGGATTTCCA
Downstream 100 bases:
>100_bases GGCGGGCCGAGGTACAACGAACAACATTAGAAACCATGATTAATGTGGAGTTTACAATGGACGGAAACGGGGAGTTTTCC GGAACTTCAGGCCTTGGGTT
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase 1
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MNKPRYFKEAFAQLKPYEPHLVSYEIKLDANENPYLFPKSLLEEIFSKIGTRDFPLYPDPLAGRLRIRLSEKLGVLPENI VLGNGSDELILCLYLAFGGYGRIALSFSPSFVMYRHHAFVTQTEFFEVSYRDDFSLDLDETKKAIEKYQPHLVFLANPNN PTGTLVDIETIKKLLAYDHLLVVDEAYVEFSGVSAIDLLKKYQNLVILRTFSKARALAGLRLGYLVASVDVVKEIIKVKN PYNVNVFSQIAGEVVLANEEVFQGEIKEIVAERERLYNQLASLGLKPVKSHANFILVEFGEKAKKIHQELINHGILVRYL GGALANYLRITVGTPEENRQLLKKLGEIL
Sequences:
>Translated_349_residues MNKPRYFKEAFAQLKPYEPHLVSYEIKLDANENPYLFPKSLLEEIFSKIGTRDFPLYPDPLAGRLRIRLSEKLGVLPENI VLGNGSDELILCLYLAFGGYGRIALSFSPSFVMYRHHAFVTQTEFFEVSYRDDFSLDLDETKKAIEKYQPHLVFLANPNN PTGTLVDIETIKKLLAYDHLLVVDEAYVEFSGVSAIDLLKKYQNLVILRTFSKARALAGLRLGYLVASVDVVKEIIKVKN PYNVNVFSQIAGEVVLANEEVFQGEIKEIVAERERLYNQLASLGLKPVKSHANFILVEFGEKAKKIHQELINHGILVRYL GGALANYLRITVGTPEENRQLLKKLGEIL >Mature_349_residues MNKPRYFKEAFAQLKPYEPHLVSYEIKLDANENPYLFPKSLLEEIFSKIGTRDFPLYPDPLAGRLRIRLSEKLGVLPENI VLGNGSDELILCLYLAFGGYGRIALSFSPSFVMYRHHAFVTQTEFFEVSYRDDFSLDLDETKKAIEKYQPHLVFLANPNN PTGTLVDIETIKKLLAYDHLLVVDEAYVEFSGVSAIDLLKKYQNLVILRTFSKARALAGLRLGYLVASVDVVKEIIKVKN PYNVNVFSQIAGEVVLANEEVFQGEIKEIVAERERLYNQLASLGLKPVKSHANFILVEFGEKAKKIHQELINHGILVRYL GGALANYLRITVGTPEENRQLLKKLGEIL
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=332, Percent_Identity=31.0240963855422, Blast_Score=134, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6322075, Length=388, Percent_Identity=31.9587628865979, Blast_Score=125, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS81_CARHZ (Q3AD52)
Other databases:
- EMBL: CP000141 - RefSeq: YP_359932.1 - ProteinModelPortal: Q3AD52 - SMR: Q3AD52 - STRING: Q3AD52 - GeneID: 3727394 - GenomeReviews: CP000141_GR - KEGG: chy:CHY_1086 - NMPDR: fig|246194.3.peg.1133 - TIGR: CHY_1086 - eggNOG: COG0079 - HOGENOM: HBG646350 - OMA: MDEAYQP - BioCyc: CHYD246194:CHY_1086-MONOMER - HAMAP: MF_01023 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 39608; Mature: 39608
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKPRYFKEAFAQLKPYEPHLVSYEIKLDANENPYLFPKSLLEEIFSKIGTRDFPLYPDP CCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEECHHHHHHHHHHHHCCCCCCCCCCC LAGRLRIRLSEKLGVLPENIVLGNGSDELILCLYLAFGGYGRIALSFSPSFVMYRHHAFV CCCEEEEEEHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEHHHEE TQTEFFEVSYRDDFSLDLDETKKAIEKYQPHLVFLANPNNPTGTLVDIETIKKLLAYDHL EEEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHE LVVDEAYVEFSGVSAIDLLKKYQNLVILRTFSKARALAGLRLGYLVASVDVVKEIIKVKN EEEEHHHHHCCCCHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PYNVNVFSQIAGEVVLANEEVFQGEIKEIVAERERLYNQLASLGLKPVKSHANFILVEFG CCCCCHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEECC EKAKKIHQELINHGILVRYLGGALANYLRITVGTPEENRQLLKKLGEIL HHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHCC >Mature Secondary Structure MNKPRYFKEAFAQLKPYEPHLVSYEIKLDANENPYLFPKSLLEEIFSKIGTRDFPLYPDP CCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEECHHHHHHHHHHHHCCCCCCCCCCC LAGRLRIRLSEKLGVLPENIVLGNGSDELILCLYLAFGGYGRIALSFSPSFVMYRHHAFV CCCEEEEEEHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEHHHEE TQTEFFEVSYRDDFSLDLDETKKAIEKYQPHLVFLANPNNPTGTLVDIETIKKLLAYDHL EEEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHE LVVDEAYVEFSGVSAIDLLKKYQNLVILRTFSKARALAGLRLGYLVASVDVVKEIIKVKN EEEEHHHHHCCCCHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PYNVNVFSQIAGEVVLANEEVFQGEIKEIVAERERLYNQLASLGLKPVKSHANFILVEFG CCCCCHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEECC EKAKKIHQELINHGILVRYLGGALANYLRITVGTPEENRQLLKKLGEIL HHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA