Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
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Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is hisB
Identifier: 78042790
GI number: 78042790
Start: 963814
End: 964392
Strand: Direct
Name: hisB
Synonym: CHY_1087
Alternate gene names: 78042790
Gene position: 963814-964392 (Clockwise)
Preceding gene: 78044277
Following gene: 78043511
Centisome position: 40.13
GC content: 46.29
Gene sequence:
>579_bases ATGAGGCGGGCCGAGGTACAACGAACAACATTAGAAACCATGATTAATGTGGAGTTTACAATGGACGGAAACGGGGAGTT TTCCGGAACTTCAGGCCTTGGGTTTTTTGACCACATGCTCACCCTGTTTTGTAAATTTGGCGGGTTTAATTTAAATCTTT CCTGCCAGGGAGACCTGGAGGTAGATGACCACCACACGGTGGAAGATATTGGTCTGGTTTTGGGGGAAGCGTTTTCTAAA GCTTTAGGGGATAAAAAGGGAATTGCCCGCTTTGCCTCGGGTTTTTATCCGATGGATGAAGCATTAATGCTGATAGCGGT TGATATTTCCGGACGGCCGTATCTTGCCTTTGAAGCTGACTTTCCGCCGGTTTTGGCAGGAAAGTTTAACTACCAGATGG TAGAAGAGTTTTTACGCGGGTTTGTGCAAAAAGCCGGGATTACGTTGCATGTCCGGGAAATTTCGGGCAAAAACTTACAC CATAAAGCCGAGGCAATTTTTAAAGGCTTGGGACGTACCTTAAAAGTTGCGGTTTCCGTCCAGGGGGATGAATTACCCTC AACCAAAGGAGTGATTTAG
Upstream 100 bases:
>100_bases TAGTGCGGTACTTGGGAGGAGCCCTTGCTAATTATTTACGGATAACCGTTGGTACACCGGAAGAAAACCGGCAACTTTTA AAGAAACTGGGGGAAATCTT
Downstream 100 bases:
>100_bases AAAGTGACGGTTGTGGTAGATTACGAAATGGGTAATCTTTTAAGTGTGACCAAGGCTTTAGAAGAACTGGGATATAAACC TTCCGTTACTTCGGATCCCA
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MRRAEVQRTTLETMINVEFTMDGNGEFSGTSGLGFFDHMLTLFCKFGGFNLNLSCQGDLEVDDHHTVEDIGLVLGEAFSK ALGDKKGIARFASGFYPMDEALMLIAVDISGRPYLAFEADFPPVLAGKFNYQMVEEFLRGFVQKAGITLHVREISGKNLH HKAEAIFKGLGRTLKVAVSVQGDELPSTKGVI
Sequences:
>Translated_192_residues MRRAEVQRTTLETMINVEFTMDGNGEFSGTSGLGFFDHMLTLFCKFGGFNLNLSCQGDLEVDDHHTVEDIGLVLGEAFSK ALGDKKGIARFASGFYPMDEALMLIAVDISGRPYLAFEADFPPVLAGKFNYQMVEEFLRGFVQKAGITLHVREISGKNLH HKAEAIFKGLGRTLKVAVSVQGDELPSTKGVI >Mature_192_residues MRRAEVQRTTLETMINVEFTMDGNGEFSGTSGLGFFDHMLTLFCKFGGFNLNLSCQGDLEVDDHHTVEDIGLVLGEAFSK ALGDKKGIARFASGFYPMDEALMLIAVDISGRPYLAFEADFPPVLAGKFNYQMVEEFLRGFVQKAGITLHVREISGKNLH HKAEAIFKGLGRTLKVAVSVQGDELPSTKGVI
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=192, Percent_Identity=50, Blast_Score=188, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6324776, Length=163, Percent_Identity=45.398773006135, Blast_Score=156, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_CARHZ (Q3AD51)
Other databases:
- EMBL: CP000141 - RefSeq: YP_359933.1 - HSSP: P34047 - ProteinModelPortal: Q3AD51 - SMR: Q3AD51 - STRING: Q3AD51 - GeneID: 3726885 - GenomeReviews: CP000141_GR - KEGG: chy:CHY_1087 - NMPDR: fig|246194.3.peg.1134 - TIGR: CHY_1087 - eggNOG: COG0131 - HOGENOM: HBG289010 - OMA: TLHVETL - BioCyc: CHYD246194:CHY_1087-MONOMER - GO: GO:0005737 - HAMAP: MF_00076 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568
Pfam domain/function: PF00475 IGPD; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =4.2.1.19
Molecular weight: Translated: 21068; Mature: 21068
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRAEVQRTTLETMINVEFTMDGNGEFSGTSGLGFFDHMLTLFCKFGGFNLNLSCQGDLE CCCHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC VDDHHTVEDIGLVLGEAFSKALGDKKGIARFASGFYPMDEALMLIAVDISGRPYLAFEAD CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEECC FPPVLAGKFNYQMVEEFLRGFVQKAGITLHVREISGKNLHHKAEAIFKGLGRTLKVAVSV CCCEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEE QGDELPSTKGVI CCCCCCCCCCCC >Mature Secondary Structure MRRAEVQRTTLETMINVEFTMDGNGEFSGTSGLGFFDHMLTLFCKFGGFNLNLSCQGDLE CCCHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC VDDHHTVEDIGLVLGEAFSKALGDKKGIARFASGFYPMDEALMLIAVDISGRPYLAFEAD CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEECC FPPVLAGKFNYQMVEEFLRGFVQKAGITLHVREISGKNLHHKAEAIFKGLGRTLKVAVSV CCCEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEE QGDELPSTKGVI CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA