| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044175
Identifier: 78044175
GI number: 78044175
Start: 885828
End: 886298
Strand: Direct
Name: 78044175
Synonym: CHY_1002
Alternate gene names: NA
Gene position: 885828-886298 (Clockwise)
Preceding gene: 78043762
Following gene: 78043764
Centisome position: 36.89
GC content: 41.19
Gene sequence:
>471_bases GTGACCAAAGGAAAAACAATATTGCTAATTGTCATTGTAGCGATAGTAGCGGTACTGGCAGGTTTAGGGGGGGCTTATTT CTTATTTGGGAAAAATTCCGGGGCGGCTCCTAAAGAGCCGCCCCCTCCTCCAACTGTTATAGCCAAGTTAGGGGATATAG TGGTAAATTTGGCTGATAAAGATACTTCCAGGTATCTGCGGGTTGGGATTAATGTGGAAATCGAAGGAGAAGGGGAAGGG GCAACAAAAGTATTTGAAGAAAAAAGCGTCATTTTTAAGGATAAGGTTATTGCCTTTCTTAGAAGCAAGGAATCAACGGA GCTTGTTGGTGATAATTCCAGCGAGAAGTTAAAAAAAGAGCTCTTGAAAATTTTGCAGGACACAGCGGCGGAACTTAACA AAAAGGTCGAGAAAAAGTCCGAAAAAATTGTCATCGTAAACGTGTATTTCAGCGATTTTATTATCCAGTAA
Upstream 100 bases:
>100_bases AGAGGGGCTATCAGGCTAATGCCCGGGTGATTACCACATCCGACCAAATGCTGGAGGAGCTCTTGAATATTAAGAGATAA GATTTGAGGTGAAGTTAAAA
Downstream 100 bases:
>100_bases TAAGGGAGGTTGTTCCTTGGGTATTCGCGATGTGGATGAATTTTTAAAAAAAATGGTTGACGATGTTCCTACATACCGGA AACCGGAATTTTCACCATTA
Product: flagellar basal body-associated protein FliL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTKGKTILLIVIVAIVAVLAGLGGAYFLFGKNSGAAPKEPPPPPTVIAKLGDIVVNLADKDTSRYLRVGINVEIEGEGEG ATKVFEEKSVIFKDKVIAFLRSKESTELVGDNSSEKLKKELLKILQDTAAELNKKVEKKSEKIVIVNVYFSDFIIQ
Sequences:
>Translated_156_residues MTKGKTILLIVIVAIVAVLAGLGGAYFLFGKNSGAAPKEPPPPPTVIAKLGDIVVNLADKDTSRYLRVGINVEIEGEGEG ATKVFEEKSVIFKDKVIAFLRSKESTELVGDNSSEKLKKELLKILQDTAAELNKKVEKKSEKIVIVNVYFSDFIIQ >Mature_155_residues TKGKTILLIVIVAIVAVLAGLGGAYFLFGKNSGAAPKEPPPPPTVIAKLGDIVVNLADKDTSRYLRVGINVEIEGEGEGA TKVFEEKSVIFKDKVIAFLRSKESTELVGDNSSEKLKKELLKILQDTAAELNKKVEKKSEKIVIVNVYFSDFIIQ
Specific function: Unknown
COG id: COG1580
COG function: function code N; Flagellar basal body-associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16947; Mature: 16816
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKGKTILLIVIVAIVAVLAGLGGAYFLFGKNSGAAPKEPPPPPTVIAKLGDIVVNLADK CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHEEECCCC DTSRYLRVGINVEIEGEGEGATKVFEEKSVIFKDKVIAFLRSKESTELVGDNSSEKLKKE CCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHH LLKILQDTAAELNKKVEKKSEKIVIVNVYFSDFIIQ HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEECC >Mature Secondary Structure TKGKTILLIVIVAIVAVLAGLGGAYFLFGKNSGAAPKEPPPPPTVIAKLGDIVVNLADK CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHEEECCCC DTSRYLRVGINVEIEGEGEGATKVFEEKSVIFKDKVIAFLRSKESTELVGDNSSEKLKKE CCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHH LLKILQDTAAELNKKVEKKSEKIVIVNVYFSDFIIQ HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA