| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is flgG [H]
Identifier: 78043762
GI number: 78043762
Start: 885022
End: 885807
Strand: Direct
Name: flgG [H]
Synonym: CHY_1001
Alternate gene names: 78043762
Gene position: 885022-885807 (Clockwise)
Preceding gene: 78043868
Following gene: 78044175
Centisome position: 36.85
GC content: 43.26
Gene sequence:
>786_bases ATGATTCGGTCACTTTATTCGGGTATTTCGGGCTTAAAAAGCCATCAGTATAAAATGGATGTTGTTGCCAATAACATTTC TAACGTTAATACTATTGGTTACAAATCCAGCCGGGTAAATTTTGAAGATTTAATTTACCAGAAAACAAACCAGTCGGGAG TTTATCCTTCTTATGTTGGCCTTGGGGTCAACGTGTCCGGAGTAGACACTATTTTTACCCAGGGCGGACTTAAATCTACA GGTCGTCCTTTAGATGTGGCGATTCAGGGCAATGGTTTCTTTGTGCTAAAAGATCCGGTAACTACCAGGACCTATTATTC CCGGGAAGGAGTCTTTTACCTTGACAAAGACGGTTATTTAATAAACGGCCATGGTTACCGGGTGCAGGACGTAAACGGTG CTGATATACAAATAAACAATCCGGAAGCTGTAGTAACTTTAACAATTCAAAACGATGGACAAATTAAGCTGGTTCGTTCC GATGGCACCACAGAATTTGCGGGTCCCATAGGCTTAATGAGCTTTAAAAACCCGGAAACCTTAGAACGGATAGGGCAAAA CGTTTATTCGGCTACTATTGATACCCAAACTTCTTTTTCCTCGCCGGTAACTCCCGGACAGCAAGGTCAGGGAATCCTGG TTTCGGGCTACCTGGAAATGTCCAATGTGGATTTAGCCAGTGAATTTACCGAGATGATTGTTACCCAGAGGGGCTATCAG GCTAATGCCCGGGTGATTACCACATCCGACCAAATGCTGGAGGAGCTCTTGAATATTAAGAGATAA
Upstream 100 bases:
>100_bases GTGCCATTTTACTTAAGTAAAAGGGCTGGACCGCAAGGGGGCCCTCACCCGCTGAACGACGGAGGCGGGTAAAAAATAAA AATTTAAAGGGGGAGTTAAA
Downstream 100 bases:
>100_bases GATTTGAGGTGAAGTTAAAAGTGACCAAAGGAAAAACAATATTGCTAATTGTCATTGTAGCGATAGTAGCGGTACTGGCA GGTTTAGGGGGGGCTTATTT
Product: flagellar basal-body rod protein FlgG
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MIRSLYSGISGLKSHQYKMDVVANNISNVNTIGYKSSRVNFEDLIYQKTNQSGVYPSYVGLGVNVSGVDTIFTQGGLKST GRPLDVAIQGNGFFVLKDPVTTRTYYSREGVFYLDKDGYLINGHGYRVQDVNGADIQINNPEAVVTLTIQNDGQIKLVRS DGTTEFAGPIGLMSFKNPETLERIGQNVYSATIDTQTSFSSPVTPGQQGQGILVSGYLEMSNVDLASEFTEMIVTQRGYQ ANARVITTSDQMLEELLNIKR
Sequences:
>Translated_261_residues MIRSLYSGISGLKSHQYKMDVVANNISNVNTIGYKSSRVNFEDLIYQKTNQSGVYPSYVGLGVNVSGVDTIFTQGGLKST GRPLDVAIQGNGFFVLKDPVTTRTYYSREGVFYLDKDGYLINGHGYRVQDVNGADIQINNPEAVVTLTIQNDGQIKLVRS DGTTEFAGPIGLMSFKNPETLERIGQNVYSATIDTQTSFSSPVTPGQQGQGILVSGYLEMSNVDLASEFTEMIVTQRGYQ ANARVITTSDQMLEELLNIKR >Mature_261_residues MIRSLYSGISGLKSHQYKMDVVANNISNVNTIGYKSSRVNFEDLIYQKTNQSGVYPSYVGLGVNVSGVDTIFTQGGLKST GRPLDVAIQGNGFFVLKDPVTTRTYYSREGVFYLDKDGYLINGHGYRVQDVNGADIQINNPEAVVTLTIQNDGQIKLVRS DGTTEFAGPIGLMSFKNPETLERIGQNVYSATIDTQTSFSSPVTPGQQGQGILVSGYLEMSNVDLASEFTEMIVTQRGYQ ANARVITTSDQMLEELLNIKR
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=270, Percent_Identity=36.6666666666667, Blast_Score=164, Evalue=4e-42, Organism=Escherichia coli, GI1787316, Length=166, Percent_Identity=36.7469879518072, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1787317, Length=255, Percent_Identity=24.3137254901961, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 28628; Mature: 28628
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRSLYSGISGLKSHQYKMDVVANNISNVNTIGYKSSRVNFEDLIYQKTNQSGVYPSYVG CCHHHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCCCCCHHHHHEEECCCCCCCCCCEE LGVNVSGVDTIFTQGGLKSTGRPLDVAIQGNGFFVLKDPVTTRTYYSREGVFYLDKDGYL CCCEECCCHHEEECCCCCCCCCEEEEEEECCCEEEECCCCCEEEEECCCCEEEECCCCEE INGHGYRVQDVNGADIQINNPEAVVTLTIQNDGQIKLVRSDGTTEFAGPIGLMSFKNPET ECCCCEEEEECCCCEEEECCCCEEEEEEEECCCEEEEEECCCCEECCCCEEEEECCCHHH LERIGQNVYSATIDTQTSFSSPVTPGQQGQGILVSGYLEMSNVDLASEFTEMIVTQRGYQ HHHHHHHHEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCC ANARVITTSDQMLEELLNIKR CCCEEEECCHHHHHHHHHCCC >Mature Secondary Structure MIRSLYSGISGLKSHQYKMDVVANNISNVNTIGYKSSRVNFEDLIYQKTNQSGVYPSYVG CCHHHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCCCCCHHHHHEEECCCCCCCCCCEE LGVNVSGVDTIFTQGGLKSTGRPLDVAIQGNGFFVLKDPVTTRTYYSREGVFYLDKDGYL CCCEECCCHHEEECCCCCCCCCEEEEEEECCCEEEECCCCCEEEEECCCCEEEECCCCEE INGHGYRVQDVNGADIQINNPEAVVTLTIQNDGQIKLVRSDGTTEFAGPIGLMSFKNPET ECCCCEEEEECCCCEEEECCCCEEEEEEEECCCEEEEEECCCCEECCCCEEEEECCCHHH LERIGQNVYSATIDTQTSFSSPVTPGQQGQGILVSGYLEMSNVDLASEFTEMIVTQRGYQ HHHHHHHHEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCC ANARVITTSDQMLEELLNIKR CCCEEEECCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1828465; 1905667; 9384377 [H]