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The map label for this gene is yiaN [C]

Identifier: 77465372

GI number: 77465372

Start: 434217

End: 435638

Strand: Reverse

Name: yiaN [C]

Synonym: RSP_3370

Alternate gene names: 77465372

Gene position: 435638-434217 (Counterclockwise)

Preceding gene: 77465373

Following gene: 77465371

Centisome position: 46.2

GC content: 64.77

Gene sequence:

>1422_bases
GTGACCGACCCTCAAGTGGCCCTGCTGATGCTGGGCATCTTCATCTCGCTCGTCTTCCTCGGCTTCCCCATCGCCTTCAC
CCTCATGGCCCTCGGCATCGGCTTCGGCTATTACGCCTATTTCGATGCGAGCCGGATGTGGCGGGCCTTCAACCGGCTGG
GGGAGGAGGCCGACGGCTGGACCTCGGCCTCGACCTGGGTCGAGGGGTTCTTCAACAACCGGATCTTCGACCTCTTCATC
AACCAGACATACACGGTGATGTCGAACGAGGTGCTGACCGCGATCCCGCTCTTTCTCTTCATGGGCTACATCGTCGAGCG
GGCGAACATCGTGGACCGGCTCTTTACCACGCTCAACATCGCCTCGAAGAACATCCCCGGCTCGATGGGGGTGGCGGCGC
TCGTGACCTGCGCGCTGTTCGCCACGGCCACCGGCATCGTGGGGGCGGTGGTCACGCTGATGGGGCTTCTCGCGCTGCCC
GCGATGCTGAAATCCCGCTACGACCATGCCTTCGCCTCGGGGATCATCTGCGCGGGCGGCACGCTCGGCATCCTGATCCC
GCCCTCGATCATGCTGATCGTCTATGCGGCCTCCTCGGGCGTCTCGATCGTGCGGCTCTATGCGGCGGCGCTCCTGCCGG
GGCTCACGCTCGTGGGCCTCTATCTCGTCTACATCATCGGCCGGGCGATCCTGCAGCCGCATGTGGCGCCACGCCCGGCG
CCGGGCGAGGTGCCGGACGTGCCGGGGGGCAAGCTCTTCCTGATGCTGCTCACCTCGTTCTTCCCGCTGGCGGTGCTGAT
CCTCGCGGTGCTGGGCTCGATCCTCTTCGGGCTGGCCACGCCCACCGAGGCGGCCTCGATCGGGGCGCTCGGGGGCATGG
TGCTGGCCGTTCTCTACCGCGCGATGACCTTCGAGAGGCTGCGCGAGAGCGTCTATCTCACCGTGCGCACGACGGCGATG
GTCTGCTGGCTCTTCGTCGGCTCATACACCTTCTCGGCGGTCTTCTCCTACCTCGGCGGCGAGCAGGTGATCGCCGACTT
CGTGGGGAGCCTCGATCTCACGCCGTTCCAGTTCCTCATCCTTGCGCAGATCATCATCTTCCTGCTCGGCTGGCCGCTCG
AATGGTCCGAGATCATCATCATCTTCGTGCCGATCTTCCTGCCGCTCTTGCGGATCTTCGACATCGACCCGCTGTTCTTC
GGGGTGCTCGTCGCGCTGAACCTGCAGACCTCGTTCCTGACACCGCCCATGGCCATGTCGGCCTATTACCTGAAGGGGAT
CGCGCCGGCGCAGGTGCGGCTCACGCAGATCTTCGCGGGCTCCTTGCCCTATGTGGGGATGGTCTTCGTCTGCATGGCGC
TGATGTATCTCTTCCCGCAGATCGTCTTCGCACTTCCGGAGTTCGTCTATGGGGCGCGCTGA

Upstream 100 bases:

>100_bases
TGCCGTGCGATGACGCCTCTGCCGCGGCCCGGACCCGCTTCCCGTTGCCGGGCGGGCCCGCCCCCTTCGACTTTCATCCT
CGCAGCAAGGAGACGGCCGA

Downstream 100 bases:

>100_bases
TCGCAACGGAGGGCTGCTCGCGCTGACCGGGGCCGAGCTTGCGGAGCGGCTCGCCTCGGGCGCGGTGCGCGCGGTGGAAC
TGGTCGAGGCCTGCCTCGCG

Product: TRAP dicarboxylate family transporter DctM subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MTDPQVALLMLGIFISLVFLGFPIAFTLMALGIGFGYYAYFDASRMWRAFNRLGEEADGWTSASTWVEGFFNNRIFDLFI
NQTYTVMSNEVLTAIPLFLFMGYIVERANIVDRLFTTLNIASKNIPGSMGVAALVTCALFATATGIVGAVVTLMGLLALP
AMLKSRYDHAFASGIICAGGTLGILIPPSIMLIVYAASSGVSIVRLYAAALLPGLTLVGLYLVYIIGRAILQPHVAPRPA
PGEVPDVPGGKLFLMLLTSFFPLAVLILAVLGSILFGLATPTEAASIGALGGMVLAVLYRAMTFERLRESVYLTVRTTAM
VCWLFVGSYTFSAVFSYLGGEQVIADFVGSLDLTPFQFLILAQIIIFLLGWPLEWSEIIIIFVPIFLPLLRIFDIDPLFF
GVLVALNLQTSFLTPPMAMSAYYLKGIAPAQVRLTQIFAGSLPYVGMVFVCMALMYLFPQIVFALPEFVYGAR

Sequences:

>Translated_473_residues
MTDPQVALLMLGIFISLVFLGFPIAFTLMALGIGFGYYAYFDASRMWRAFNRLGEEADGWTSASTWVEGFFNNRIFDLFI
NQTYTVMSNEVLTAIPLFLFMGYIVERANIVDRLFTTLNIASKNIPGSMGVAALVTCALFATATGIVGAVVTLMGLLALP
AMLKSRYDHAFASGIICAGGTLGILIPPSIMLIVYAASSGVSIVRLYAAALLPGLTLVGLYLVYIIGRAILQPHVAPRPA
PGEVPDVPGGKLFLMLLTSFFPLAVLILAVLGSILFGLATPTEAASIGALGGMVLAVLYRAMTFERLRESVYLTVRTTAM
VCWLFVGSYTFSAVFSYLGGEQVIADFVGSLDLTPFQFLILAQIIIFLLGWPLEWSEIIIIFVPIFLPLLRIFDIDPLFF
GVLVALNLQTSFLTPPMAMSAYYLKGIAPAQVRLTQIFAGSLPYVGMVFVCMALMYLFPQIVFALPEFVYGAR
>Mature_472_residues
TDPQVALLMLGIFISLVFLGFPIAFTLMALGIGFGYYAYFDASRMWRAFNRLGEEADGWTSASTWVEGFFNNRIFDLFIN
QTYTVMSNEVLTAIPLFLFMGYIVERANIVDRLFTTLNIASKNIPGSMGVAALVTCALFATATGIVGAVVTLMGLLALPA
MLKSRYDHAFASGIICAGGTLGILIPPSIMLIVYAASSGVSIVRLYAAALLPGLTLVGLYLVYIIGRAILQPHVAPRPAP
GEVPDVPGGKLFLMLLTSFFPLAVLILAVLGSILFGLATPTEAASIGALGGMVLAVLYRAMTFERLRESVYLTVRTTAMV
CWLFVGSYTFSAVFSYLGGEQVIADFVGSLDLTPFQFLILAQIIIFLLGWPLEWSEIIIIFVPIFLPLLRIFDIDPLFFG
VLVALNLQTSFLTPPMAMSAYYLKGIAPAQVRLTQIFAGSLPYVGMVFVCMALMYLFPQIVFALPEFVYGAR

Specific function: Unknown

COG id: COG4664

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=342, Percent_Identity=26.0233918128655, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 51425; Mature: 51294

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS00287 CYSTATIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPQVALLMLGIFISLVFLGFPIAFTLMALGIGFGYYAYFDASRMWRAFNRLGEEADGW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TSASTWVEGFFNNRIFDLFINQTYTVMSNEVLTAIPLFLFMGYIVERANIVDRLFTTLNI
CHHHHHHHHHHCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASKNIPGSMGVAALVTCALFATATGIVGAVVTLMGLLALPAMLKSRYDHAFASGIICAGG
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCC
TLGILIPPSIMLIVYAASSGVSIVRLYAAALLPGLTLVGLYLVYIIGRAILQPHVAPRPA
CEEEEECCHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PGEVPDVPGGKLFLMLLTSFFPLAVLILAVLGSILFGLATPTEAASIGALGGMVLAVLYR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
AMTFERLRESVYLTVRTTAMVCWLFVGSYTFSAVFSYLGGEQVIADFVGSLDLTPFQFLI
HHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHH
LAQIIIFLLGWPLEWSEIIIIFVPIFLPLLRIFDIDPLFFGVLVALNLQTSFLTPPMAMS
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHH
AYYLKGIAPAQVRLTQIFAGSLPYVGMVFVCMALMYLFPQIVFALPEFVYGAR
HHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDPQVALLMLGIFISLVFLGFPIAFTLMALGIGFGYYAYFDASRMWRAFNRLGEEADGW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TSASTWVEGFFNNRIFDLFINQTYTVMSNEVLTAIPLFLFMGYIVERANIVDRLFTTLNI
CHHHHHHHHHHCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASKNIPGSMGVAALVTCALFATATGIVGAVVTLMGLLALPAMLKSRYDHAFASGIICAGG
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCC
TLGILIPPSIMLIVYAASSGVSIVRLYAAALLPGLTLVGLYLVYIIGRAILQPHVAPRPA
CEEEEECCHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PGEVPDVPGGKLFLMLLTSFFPLAVLILAVLGSILFGLATPTEAASIGALGGMVLAVLYR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
AMTFERLRESVYLTVRTTAMVCWLFVGSYTFSAVFSYLGGEQVIADFVGSLDLTPFQFLI
HHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHH
LAQIIIFLLGWPLEWSEIIIIFVPIFLPLLRIFDIDPLFFGVLVALNLQTSFLTPPMAMS
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHH
AYYLKGIAPAQVRLTQIFAGSLPYVGMVFVCMALMYLFPQIVFALPEFVYGAR
HHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]