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The map label for this gene is 77465373

Identifier: 77465373

GI number: 77465373

Start: 435820

End: 436392

Strand: Reverse

Name: 77465373

Synonym: RSP_3371

Alternate gene names: NA

Gene position: 436392-435820 (Counterclockwise)

Preceding gene: 77465374

Following gene: 77465372

Centisome position: 46.28

GC content: 64.75

Gene sequence:

>573_bases
ATGCGCGCCTTCATCCGTTTCGCCGACCGCCTGTCGGCGGCCTTCGGCCATGCCTTCGGCTGGCTGGTGGTCCTCATGAC
CCTCGGGGTCAGCTACGAAGTTCTCGTGCGCTACGCCTTCAATGCGCCGACGCCCTGGTCGCTCGACGTGTCCTTCATCA
TGTATGGCACGCTCTTCATGATGGGCGGCGCCTATACGCTGTCGCGCAACGGCCATGTGCGCGGCGATTTCCTCTACCGG
ATGTGGAAGCCCCGCACGCAGGCGGCGGTGGATCTGGTGCTCTACCTGATCTTCTTCTTTCCCGGCATCACGGCGCTGAT
CCTTTCGGGCTGGAAATATTCCGCGCGGTCCTGGGGGTATGCCGAAGTCAGCGTGAACAGCCCTGCGGGCATCCCGATCT
ATCAGTTCAAGTCGGTGATGGTGGCCGCGGGGCTCCTCCTCTTCATTCAGGGGCTGGCGCAGGTCTGCCGCTGCCTCCTC
TGCCTGCGCGAGGGCTACTGGCTCTCGGCCGAGCAGGATGTCGAGGAGACCGAGGCCGCGCTCGTGCGCGACCATGGCGG
GGAGGCGACATGA

Upstream 100 bases:

>100_bases
CCTCGGGCTGGCCTACGAACATCACTTCCCCGGCAAGCTCAAGCTCTGACGCGATCCGGCCCCGGGACCTCTCCCGGGGC
CTTTTCCATCGGGAGATCCC

Downstream 100 bases:

>100_bases
GCCGCGCCGCTGCCGCCCCGGCCCGGCGATTACGGGCGCCGCGCGGCTCCGCATCCGTTCCGGCGCGGACCCGCTCCCGG
TTGCCGTGCGATGACGCCTC

Product: TRAP-T family transporter small inner membrane subunit

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; Mannitol Transporter; TRAP Transporter Small Transmembrane Protein; TRAP Transporter DctQ Family Protein; Tripartite Transporter Small Subunit; Transporter DctQ Related Transmembrane Protein; TRAP Mannitol/C4-Dicarboxylate Transporter; Permease; Small Integral Membrane Tranport Protein; Transmembrane Transporter Component; TRAP C4-Dicarboxylate Transport System DctQ Subunit; TRAP Dicarboxylate Transporter Subunit DctQ; C4-Dicarboxylate Transporter Family Protein DctQ Subunit; TRAP-Type Transporter Small Permease Component; Trap Dicarboxylate Transporter Dctm Subunit; Trap-Type Transport System Small Permease Component; TRAP-Type Large Permease Component; TRAP-T Family Tripartite Transporter; Transporter DctQ-Related Transmembrane Protein; TRAP Transporter DctQ-Like Membrane Protein Family; TRAP Dicarboxylate Transporter DctM Subunit; TRAP-Type Transport System Small Permease Component; TRAP Transporter Small Subunit; TRAP Dicarboxylate Transporter DctQ Subunit; Permease Protein; Tripartite ATP-Independent Periplasmic; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; C4-Dicarboxylate Transporter Small Subunit

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MRAFIRFADRLSAAFGHAFGWLVVLMTLGVSYEVLVRYAFNAPTPWSLDVSFIMYGTLFMMGGAYTLSRNGHVRGDFLYR
MWKPRTQAAVDLVLYLIFFFPGITALILSGWKYSARSWGYAEVSVNSPAGIPIYQFKSVMVAAGLLLFIQGLAQVCRCLL
CLREGYWLSAEQDVEETEAALVRDHGGEAT

Sequences:

>Translated_190_residues
MRAFIRFADRLSAAFGHAFGWLVVLMTLGVSYEVLVRYAFNAPTPWSLDVSFIMYGTLFMMGGAYTLSRNGHVRGDFLYR
MWKPRTQAAVDLVLYLIFFFPGITALILSGWKYSARSWGYAEVSVNSPAGIPIYQFKSVMVAAGLLLFIQGLAQVCRCLL
CLREGYWLSAEQDVEETEAALVRDHGGEAT
>Mature_190_residues
MRAFIRFADRLSAAFGHAFGWLVVLMTLGVSYEVLVRYAFNAPTPWSLDVSFIMYGTLFMMGGAYTLSRNGHVRGDFLYR
MWKPRTQAAVDLVLYLIFFFPGITALILSGWKYSARSWGYAEVSVNSPAGIPIYQFKSVMVAAGLLLFIQGLAQVCRCLL
CLREGYWLSAEQDVEETEAALVRDHGGEAT

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21278; Mature: 21278

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAFIRFADRLSAAFGHAFGWLVVLMTLGVSYEVLVRYAFNAPTPWSLDVSFIMYGTLFM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
MGGAYTLSRNGHVRGDFLYRMWKPRTQAAVDLVLYLIFFFPGITALILSGWKYSARSWGY
HCCCEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
AEVSVNSPAGIPIYQFKSVMVAAGLLLFIQGLAQVCRCLLCLREGYWLSAEQDVEETEAA
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
LVRDHGGEAT
HHHCCCCCCC
>Mature Secondary Structure
MRAFIRFADRLSAAFGHAFGWLVVLMTLGVSYEVLVRYAFNAPTPWSLDVSFIMYGTLFM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
MGGAYTLSRNGHVRGDFLYRMWKPRTQAAVDLVLYLIFFFPGITALILSGWKYSARSWGY
HCCCEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
AEVSVNSPAGIPIYQFKSVMVAAGLLLFIQGLAQVCRCLLCLREGYWLSAEQDVEETEAA
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
LVRDHGGEAT
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA