| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is gstA [H]
Identifier: 77461910
GI number: 77461910
Start: 6377235
End: 6377918
Strand: Reverse
Name: gstA [H]
Synonym: Pfl01_5690
Alternate gene names: 77461910
Gene position: 6377918-6377235 (Counterclockwise)
Preceding gene: 77461911
Following gene: 77461909
Centisome position: 99.06
GC content: 62.28
Gene sequence:
>684_bases ATGGCTCCCACGGCCGCCGTCCACCCTGAACGGCGCCATCATCCAGCGGAGTCGACCATGCAAGCGATCAAACTCTACAA CTTCCCGCGTTCCGGCCACGCCCATCGTGTCGAGCTGATGTTGTCACTGTTGCAACTGCCGACCGAGCTGATCTTTGTCG ATCTGGCCAAAGGCGAGCACAAACAGCCCGGCTACCTGGCGATCAACAGCTTCGGGCAAGTACCGGCCATTGATGACAAC GGCGTGGTACTGGCCGACTCCAACGCGATTCTCGTCTACCTGGCACAGAAATACGGCAACGGCCGCTGGCTGCCAAGCGA TCCGGTCGGCGCCGCGCATGTGCAGCGCTGGTTGTCGGCAGCCGCCGGGCCGATTGCCTTCGGTCCTGCCGCCGCCCGCC TGATCACGGTGTTCGGGGCGAAGTTCAACGCTGAGGAAGTCATCACCCGCGCGCACAATTTTCTCAAGGTGATGGACTTG GAACTGGGCAAAACCCCGTATTTGGCGGGCACTGAGCCGACCATTGCCGATGTCTCGGCCTACAGCTACATCGCCCACGC GCCGGAAGGCAATGTATCGCTGGACGACTACGCTAACGTTCGCGCCTGGCTCTCGCGTATCGAAGCGCTGCCCGGTTTTG TCGGCATGCCGCGCACCGTTGCCGGCCTGCAAACCACCGTCTGA
Upstream 100 bases:
>100_bases TGCGTGAGCATCCCGCCTTGAAAAATGCCGCTTTATTTCATCCAGAGAAATAATGGATTGCATTTGCTGGTGATTCTGTT GTTTTCACGATAGGTGGAAG
Downstream 100 bases:
>100_bases CATTCAATCTGCGCCGACGGCGCAGGGGAGAGACCGTGATGGAACGTTCACCGTGGCACGCTGGCGAGCAACAGTTGCAG GCCCATGTCGGCGTTGCCGA
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MAPTAAVHPERRHHPAESTMQAIKLYNFPRSGHAHRVELMLSLLQLPTELIFVDLAKGEHKQPGYLAINSFGQVPAIDDN GVVLADSNAILVYLAQKYGNGRWLPSDPVGAAHVQRWLSAAAGPIAFGPAAARLITVFGAKFNAEEVITRAHNFLKVMDL ELGKTPYLAGTEPTIADVSAYSYIAHAPEGNVSLDDYANVRAWLSRIEALPGFVGMPRTVAGLQTTV
Sequences:
>Translated_227_residues MAPTAAVHPERRHHPAESTMQAIKLYNFPRSGHAHRVELMLSLLQLPTELIFVDLAKGEHKQPGYLAINSFGQVPAIDDN GVVLADSNAILVYLAQKYGNGRWLPSDPVGAAHVQRWLSAAAGPIAFGPAAARLITVFGAKFNAEEVITRAHNFLKVMDL ELGKTPYLAGTEPTIADVSAYSYIAHAPEGNVSLDDYANVRAWLSRIEALPGFVGMPRTVAGLQTTV >Mature_226_residues APTAAVHPERRHHPAESTMQAIKLYNFPRSGHAHRVELMLSLLQLPTELIFVDLAKGEHKQPGYLAINSFGQVPAIDDNG VVLADSNAILVYLAQKYGNGRWLPSDPVGAAHVQRWLSAAAGPIAFGPAAARLITVFGAKFNAEEVITRAHNFLKVMDLE LGKTPYLAGTEPTIADVSAYSYIAHAPEGNVSLDDYANVRAWLSRIEALPGFVGMPRTVAGLQTTV
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI4504187, Length=179, Percent_Identity=34.0782122905028, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI124249394, Length=179, Percent_Identity=34.0782122905028, Blast_Score=84, Evalue=1e-16, Organism=Escherichia coli, GI1788640, Length=204, Percent_Identity=27.9411764705882, Blast_Score=70, Evalue=1e-13, Organism=Drosophila melanogaster, GI19922526, Length=195, Percent_Identity=34.8717948717949, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI20130123, Length=197, Percent_Identity=32.994923857868, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI24654965, Length=201, Percent_Identity=31.8407960199005, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24654975, Length=203, Percent_Identity=33.0049261083744, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI17933730, Length=188, Percent_Identity=24.468085106383, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI19922532, Length=202, Percent_Identity=30.6930693069307, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI19922528, Length=200, Percent_Identity=30.5, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24654979, Length=203, Percent_Identity=30.0492610837438, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI17864592, Length=193, Percent_Identity=25.3886010362694, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI20130115, Length=204, Percent_Identity=30.8823529411765, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24654983, Length=202, Percent_Identity=29.7029702970297, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI17864594, Length=195, Percent_Identity=26.6666666666667, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI19922932, Length=178, Percent_Identity=28.6516853932584, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 24516; Mature: 24385
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPTAAVHPERRHHPAESTMQAIKLYNFPRSGHAHRVELMLSLLQLPTELIFVDLAKGEH CCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHEEEEECCCCCC KQPGYLAINSFGQVPAIDDNGVVLADSNAILVYLAQKYGNGRWLPSDPVGAAHVQRWLSA CCCCEEEEECCCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHH AAGPIAFGPAAARLITVFGAKFNAEEVITRAHNFLKVMDLELGKTPYLAGTEPTIADVSA CCCCCEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH YSYIAHAPEGNVSLDDYANVRAWLSRIEALPGFVGMPRTVAGLQTTV HHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCC >Mature Secondary Structure APTAAVHPERRHHPAESTMQAIKLYNFPRSGHAHRVELMLSLLQLPTELIFVDLAKGEH CCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHEEEEECCCCCC KQPGYLAINSFGQVPAIDDNGVVLADSNAILVYLAQKYGNGRWLPSDPVGAAHVQRWLSA CCCCEEEEECCCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHH AAGPIAFGPAAARLITVFGAKFNAEEVITRAHNFLKVMDLELGKTPYLAGTEPTIADVSA CCCCCEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH YSYIAHAPEGNVSLDDYANVRAWLSRIEALPGFVGMPRTVAGLQTTV HHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA