Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77461809
Identifier: 77461809
GI number: 77461809
Start: 6261506
End: 6261949
Strand: Reverse
Name: 77461809
Synonym: Pfl01_5588
Alternate gene names: NA
Gene position: 6261949-6261506 (Counterclockwise)
Preceding gene: 77461810
Following gene: 77461808
Centisome position: 97.26
GC content: 56.31
Gene sequence:
>444_bases ATGAATATCTACGTGCGCCTTGCTCTGTGTCTGGTGATTCACGCGGTGGGATGCGTGTCCTACGTATTTCTGAACAACGC AGTCGTTGTGGCCTACAAGGCGTTTAACGGCGGATTTACTACCCGTGGGGTGGCGATCGGTATTGCTCACTACATGTTCA TTTACATCTTTTTCGGGGTGAACGCGCTGGCCGCGATTATCCCGAAACTGTGGGCCAAGCTCGGCCTGCTCACACTAATG GTTGCCTGGATTCTATTCATGATGGTGCCCGACAACCCGTTGCGGGCGCTGTTCTACACCGTGGCTCAGGGCGGGGTGAC GTTGCTGGCGATTCTGGCCACGCAGCTCATTGAGCTGCGCCTGGAAAAGCGCGCGTTGATGCGGCAGGCAATGCCTGCGA TTGCTTCGCAGAACGTGCTTTCGAAGATGAGGACCTGCCCGTGA
Upstream 100 bases:
>100_bases ATCCGCTCAGCGCCGCAGCTGTCGGCGGCTACGATGGCGTCGAGCTCTATCTGTACACGGGCGTCGCGATCACGTCGCAA AAACAGGGAATTGCGCAGCA
Downstream 100 bases:
>100_bases TCGGTGTATCGAATCAGATGCCCATCCTCAGCCGCGCGCAGCTGAGTTTTTTCATGGGTGCCTTGTGGACGCCATTCTTG GCCATGCTGGCGTTTTCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MNIYVRLALCLVIHAVGCVSYVFLNNAVVVAYKAFNGGFTTRGVAIGIAHYMFIYIFFGVNALAAIIPKLWAKLGLLTLM VAWILFMMVPDNPLRALFYTVAQGGVTLLAILATQLIELRLEKRALMRQAMPAIASQNVLSKMRTCP
Sequences:
>Translated_147_residues MNIYVRLALCLVIHAVGCVSYVFLNNAVVVAYKAFNGGFTTRGVAIGIAHYMFIYIFFGVNALAAIIPKLWAKLGLLTLM VAWILFMMVPDNPLRALFYTVAQGGVTLLAILATQLIELRLEKRALMRQAMPAIASQNVLSKMRTCP >Mature_147_residues MNIYVRLALCLVIHAVGCVSYVFLNNAVVVAYKAFNGGFTTRGVAIGIAHYMFIYIFFGVNALAAIIPKLWAKLGLLTLM VAWILFMMVPDNPLRALFYTVAQGGVTLLAILATQLIELRLEKRALMRQAMPAIASQNVLSKMRTCP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16210; Mature: 16210
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIYVRLALCLVIHAVGCVSYVFLNNAVVVAYKAFNGGFTTRGVAIGIAHYMFIYIFFGV CCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH NALAAIIPKLWAKLGLLTLMVAWILFMMVPDNPLRALFYTVAQGGVTLLAILATQLIELR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHH LEKRALMRQAMPAIASQNVLSKMRTCP HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNIYVRLALCLVIHAVGCVSYVFLNNAVVVAYKAFNGGFTTRGVAIGIAHYMFIYIFFGV CCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH NALAAIIPKLWAKLGLLTLMVAWILFMMVPDNPLRALFYTVAQGGVTLLAILATQLIELR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHH LEKRALMRQAMPAIASQNVLSKMRTCP HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA