Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77461810
Identifier: 77461810
GI number: 77461810
Start: 6261946
End: 6262350
Strand: Reverse
Name: 77461810
Synonym: Pfl01_5589
Alternate gene names: NA
Gene position: 6262350-6261946 (Counterclockwise)
Preceding gene: 77461811
Following gene: 77461809
Centisome position: 97.27
GC content: 56.79
Gene sequence:
>405_bases ATGAAGCGCTTTTTTCGGATCGGCTCCAAGAAGCTCAGTGCCTGGCAATGCCTTGTAGCTTTTCTCAGCTCGGTCGGTTT GCTGGCGATTCTGATCGGCCTTGCGTTGCTGTTGCGAATGGAACACTCCACCGAGCCCAAGCTGTTCGCCCATCCCAATG CTCTGTGGATCGGTGCCGAAGATGGCGGGGTATTCGTTGAAATTACCAGGAGCGAGGCACCGGACTACTACGTTGAGATC CGCCACGAGGGTGGTGGAATGTGGACCGAAGGTTGGATTCGTTATGGCACACGGGACAGTTATCCGCTCAGCGCCGCAGC TGTCGGCGGCTACGATGGCGTCGAGCTCTATCTGTACACGGGCGTCGCGATCACGTCGCAAAAACAGGGAATTGCGCAGC AATGA
Upstream 100 bases:
>100_bases CCATCGACGCGCAGACATTACGAAAAGCCTTGGCGAGCATAGAAAAAACTGAAGAAAGGGGTGTTCGCTCATGGACGGTC GATAACGGGGCTTTCTGCCC
Downstream 100 bases:
>100_bases ATATCTACGTGCGCCTTGCTCTGTGTCTGGTGATTCACGCGGTGGGATGCGTGTCCTACGTATTTCTGAACAACGCAGTC GTTGTGGCCTACAAGGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MKRFFRIGSKKLSAWQCLVAFLSSVGLLAILIGLALLLRMEHSTEPKLFAHPNALWIGAEDGGVFVEITRSEAPDYYVEI RHEGGGMWTEGWIRYGTRDSYPLSAAAVGGYDGVELYLYTGVAITSQKQGIAQQ
Sequences:
>Translated_134_residues MKRFFRIGSKKLSAWQCLVAFLSSVGLLAILIGLALLLRMEHSTEPKLFAHPNALWIGAEDGGVFVEITRSEAPDYYVEI RHEGGGMWTEGWIRYGTRDSYPLSAAAVGGYDGVELYLYTGVAITSQKQGIAQQ >Mature_134_residues MKRFFRIGSKKLSAWQCLVAFLSSVGLLAILIGLALLLRMEHSTEPKLFAHPNALWIGAEDGGVFVEITRSEAPDYYVEI RHEGGGMWTEGWIRYGTRDSYPLSAAAVGGYDGVELYLYTGVAITSQKQGIAQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14785; Mature: 14785
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFFRIGSKKLSAWQCLVAFLSSVGLLAILIGLALLLRMEHSTEPKLFAHPNALWIGAE CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEEC DGGVFVEITRSEAPDYYVEIRHEGGGMWTEGWIRYGTRDSYPLSAAAVGGYDGVELYLYT CCCEEEEEECCCCCCEEEEEEECCCCEECCCEEEECCCCCCCCEEEECCCCCCEEEEEEE GVAITSQKQGIAQQ CEEEECCCCCCCCC >Mature Secondary Structure MKRFFRIGSKKLSAWQCLVAFLSSVGLLAILIGLALLLRMEHSTEPKLFAHPNALWIGAE CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEEC DGGVFVEITRSEAPDYYVEIRHEGGGMWTEGWIRYGTRDSYPLSAAAVGGYDGVELYLYT CCCEEEEEECCCCCCEEEEEEECCCCEECCCEEEECCCCCCCCEEEECCCCCCEEEEEEE GVAITSQKQGIAQQ CEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA