Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77461810

Identifier: 77461810

GI number: 77461810

Start: 6261946

End: 6262350

Strand: Reverse

Name: 77461810

Synonym: Pfl01_5589

Alternate gene names: NA

Gene position: 6262350-6261946 (Counterclockwise)

Preceding gene: 77461811

Following gene: 77461809

Centisome position: 97.27

GC content: 56.79

Gene sequence:

>405_bases
ATGAAGCGCTTTTTTCGGATCGGCTCCAAGAAGCTCAGTGCCTGGCAATGCCTTGTAGCTTTTCTCAGCTCGGTCGGTTT
GCTGGCGATTCTGATCGGCCTTGCGTTGCTGTTGCGAATGGAACACTCCACCGAGCCCAAGCTGTTCGCCCATCCCAATG
CTCTGTGGATCGGTGCCGAAGATGGCGGGGTATTCGTTGAAATTACCAGGAGCGAGGCACCGGACTACTACGTTGAGATC
CGCCACGAGGGTGGTGGAATGTGGACCGAAGGTTGGATTCGTTATGGCACACGGGACAGTTATCCGCTCAGCGCCGCAGC
TGTCGGCGGCTACGATGGCGTCGAGCTCTATCTGTACACGGGCGTCGCGATCACGTCGCAAAAACAGGGAATTGCGCAGC
AATGA

Upstream 100 bases:

>100_bases
CCATCGACGCGCAGACATTACGAAAAGCCTTGGCGAGCATAGAAAAAACTGAAGAAAGGGGTGTTCGCTCATGGACGGTC
GATAACGGGGCTTTCTGCCC

Downstream 100 bases:

>100_bases
ATATCTACGTGCGCCTTGCTCTGTGTCTGGTGATTCACGCGGTGGGATGCGTGTCCTACGTATTTCTGAACAACGCAGTC
GTTGTGGCCTACAAGGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MKRFFRIGSKKLSAWQCLVAFLSSVGLLAILIGLALLLRMEHSTEPKLFAHPNALWIGAEDGGVFVEITRSEAPDYYVEI
RHEGGGMWTEGWIRYGTRDSYPLSAAAVGGYDGVELYLYTGVAITSQKQGIAQQ

Sequences:

>Translated_134_residues
MKRFFRIGSKKLSAWQCLVAFLSSVGLLAILIGLALLLRMEHSTEPKLFAHPNALWIGAEDGGVFVEITRSEAPDYYVEI
RHEGGGMWTEGWIRYGTRDSYPLSAAAVGGYDGVELYLYTGVAITSQKQGIAQQ
>Mature_134_residues
MKRFFRIGSKKLSAWQCLVAFLSSVGLLAILIGLALLLRMEHSTEPKLFAHPNALWIGAEDGGVFVEITRSEAPDYYVEI
RHEGGGMWTEGWIRYGTRDSYPLSAAAVGGYDGVELYLYTGVAITSQKQGIAQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14785; Mature: 14785

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFFRIGSKKLSAWQCLVAFLSSVGLLAILIGLALLLRMEHSTEPKLFAHPNALWIGAE
CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEEC
DGGVFVEITRSEAPDYYVEIRHEGGGMWTEGWIRYGTRDSYPLSAAAVGGYDGVELYLYT
CCCEEEEEECCCCCCEEEEEEECCCCEECCCEEEECCCCCCCCEEEECCCCCCEEEEEEE
GVAITSQKQGIAQQ
CEEEECCCCCCCCC
>Mature Secondary Structure
MKRFFRIGSKKLSAWQCLVAFLSSVGLLAILIGLALLLRMEHSTEPKLFAHPNALWIGAE
CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEEC
DGGVFVEITRSEAPDYYVEIRHEGGGMWTEGWIRYGTRDSYPLSAAAVGGYDGVELYLYT
CCCEEEEEECCCCCCEEEEEEECCCCEECCCEEEECCCCCCCCEEEECCCCCCEEEEEEE
GVAITSQKQGIAQQ
CEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA