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The map label for this gene is yeaW [C]

Identifier: 77460010

GI number: 77460010

Start: 4286229

End: 4286666

Strand: Direct

Name: yeaW [C]

Synonym: Pfl01_3788

Alternate gene names: 77460010

Gene position: 4286229-4286666 (Clockwise)

Preceding gene: 77460005

Following gene: 77460015

Centisome position: 66.57

GC content: 60.27

Gene sequence:

>438_bases
TTGATTATTCCGCCCATCGACTGGTCGCAATCCATCAACCCCACACCCGTTCCGCACGGTACGCCGCGTTGCAAGTGGAT
AAAGAATTTCGAGCTGGCACAGTTCAACATTTCCCAAGTGCGCACCGAAGAACTCGGCGGCTTCATCTACTTCAACCTCG
ACCCGAATGCACTGTCGCCGCGGGATCTGTACCCTGGGGTCGATGAGGAAATACGCCGCGTGTTTCCGGATCTGGCCGAC
ATGCGCCTGATTCGGGCACACAACCTGTTGCAACAGACACAGATGAGCGTGGCCCAGGTGGCGGCGTGTTCAGGGTTTGG
CTCACTGGAGCATTTCTCCCGCACTTACCGCGCGCGGTTTGGTTGCCCGCCGAGTGAGGATCGGCGTCAGGCGTGGAGCG
CGCCGGTGATGCGCCAGCCGCTGGGCAAGGCACCTTGA

Upstream 100 bases:

>100_bases
ATGGAAAACCTTCCTCTGCATCATGATCGAATGCTCCGCGCAGATCGCGGCGAAGTTTCATTATCGCAGGGCTGTCAAGG
CTCTCGCGTGAAGCAGGCGA

Downstream 100 bases:

>100_bases
AACGAAGAGCGGCCGTTCACCCGAGACGTTGCGCAAGCTTTTGGCAAAAAAATGCCTACCACAGGCAGGCACTGTTGAAA
CTCGAACGTTCAGCTGTGCG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; Transcriptional Regulator AraC Family; Rieske Protein; Rieske Domain-Containing Protein

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MIIPPIDWSQSINPTPVPHGTPRCKWIKNFELAQFNISQVRTEELGGFIYFNLDPNALSPRDLYPGVDEEIRRVFPDLAD
MRLIRAHNLLQQTQMSVAQVAACSGFGSLEHFSRTYRARFGCPPSEDRRQAWSAPVMRQPLGKAP

Sequences:

>Translated_145_residues
MIIPPIDWSQSINPTPVPHGTPRCKWIKNFELAQFNISQVRTEELGGFIYFNLDPNALSPRDLYPGVDEEIRRVFPDLAD
MRLIRAHNLLQQTQMSVAQVAACSGFGSLEHFSRTYRARFGCPPSEDRRQAWSAPVMRQPLGKAP
>Mature_145_residues
MIIPPIDWSQSINPTPVPHGTPRCKWIKNFELAQFNISQVRTEELGGFIYFNLDPNALSPRDLYPGVDEEIRRVFPDLAD
MRLIRAHNLLQQTQMSVAQVAACSGFGSLEHFSRTYRARFGCPPSEDRRQAWSAPVMRQPLGKAP

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.14.1.- [C]

Molecular weight: Translated: 16480; Mature: 16480

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIPPIDWSQSINPTPVPHGTPRCKWIKNFELAQFNISQVRTEELGGFIYFNLDPNALSP
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCC
RDLYPGVDEEIRRVFPDLADMRLIRAHNLLQQTQMSVAQVAACSGFGSLEHFSRTYRARF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
GCPPSEDRRQAWSAPVMRQPLGKAP
CCCCCHHHHHHHCCCHHHCCCCCCC
>Mature Secondary Structure
MIIPPIDWSQSINPTPVPHGTPRCKWIKNFELAQFNISQVRTEELGGFIYFNLDPNALSP
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCC
RDLYPGVDEEIRRVFPDLADMRLIRAHNLLQQTQMSVAQVAACSGFGSLEHFSRTYRARF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
GCPPSEDRRQAWSAPVMRQPLGKAP
CCCCCHHHHHHHCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA