Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is uhpC [H]
Identifier: 77459902
GI number: 77459902
Start: 4164159
End: 4165484
Strand: Reverse
Name: uhpC [H]
Synonym: Pfl01_3680
Alternate gene names: 77459902
Gene position: 4165484-4164159 (Counterclockwise)
Preceding gene: 77459904
Following gene: 77459901
Centisome position: 64.7
GC content: 62.9
Gene sequence:
>1326_bases ATGAACAAGCACATCGGCACCCTTGCGCGTTGGCGCATGCAGATCTTCGCTGTCACCTGGCTCGCTTACGCCGCGTTCTA TTTCACCCGCAAAGCCTTTTCGGTGGCCAAACTGGGCATCGCCGAAGACCCGAGTTTCACCCTCGACAAAATGGCCATGG CCAACCTCGACGCGATTTACCTGGCGGCCTACGCCATCGGCCAGTTCACCTGGGGCATGCTCGCCGACCGCTTCGGCCCA CGGATCGTGGTGCTTGGCGGGTTGCTGATTTCCGCTGCGGCAGCGCTGGTGATGGGCAGTTTTGCGACCTTGCCGATCTT CGCCACCTGCATGTTGATTCAGGGCCTGGCGCAGTCCACCGGTTGGTCGGGGTTGTGCAAGAACCTCGGTAGTTTTTTCC CTTCGGAACAGCGCGGGCGAGTGCTCGGGTTGTGGAGTTCCTGCTACGCCTTCGGTGGATTGGTGGCCTCGCCGTTCGCC GGTTGGTGGGCGTACACGCTGGTCGGCACCTGGCACGCGGCGTTCATTTCCAGTGCGGCGGTGGTCGCGGCGGTGGCGGT GTTGTTCTTCATCTTTCAGCGCAACAAACCGGAAGATGTCGGCCTGCCGGCGGTGGAACCGGAACCGGTCATCAGTGCCG AGGAAGCCGAAGCCAACAGCAAACTCAGCGTGTGGGAACCGCTCAAGGAAATCCTGCGTAACCGCACGGTGCTGGTGTTG GGTCTGGCGTATTTCCTGTTGAAACCGGCGCGTTACGCGATTCTGCTGTGGGGCCCGGTGATCGTGTTCGAACAGATGCC TTCGGTCGGCAAGGTTGGCGCGGCGATCATTCCCACGGCGTTTGAACTGGCCGGTCTGCTGGGTCCGATCATGATCGGCC TGGCCTCGGACAAACTGTTCGGTGCCCGACGCATGCCGGCCTGCGTGTTGAGTCTGCTGGCGCTGACCGTGACCCTTGCG CTGTTCATGGGCGCCTTGCACACCGGCAGCGTGATGCTGGTGGTCGCATTGTTGTTCGTGATGGGCCTGACCCTGTACGG CCCGGACTCAATGATCAGCGGCGCGGCCGCGATCGATTTCGGCAAGGCCAAGGCCGGCGCCACGGCGGCGGGATTCGTCA ACGGCTGCGGCTCGGTCGGTGCGGTGCTCGGTGGTTTGCTGCCGGGTTACTTCGACTCGGTGACGGTGTTCATCGTGTTC GCCGGTTGTGCGCTGTTCTCGGCGCTGGTGCTGATTCCACACTGGAACAGCCGCCCGGTCGGCGTCATGGAACCGCGCGC CTACGTGCCCAATCGTGCCCTGACCGTCAAACCCCTGCGTAACTGA
Upstream 100 bases:
>100_bases CCGAAGGGACGGGGTGATATCGCAGTGCTCAACAATAAAAAACACAGGCGTTTACTTATCGATTCTGCCGGCACACTCAC ACCCTGAGGTCAGAACCACA
Downstream 100 bases:
>100_bases AACCCCTTGTCTCGCGGCCTGCTGCGGCACTCGCGGCAGGCTGTGTCGTGGCCGACTGACTGGAGAATTTTCATGAGACC GTTTTGGCTGGAGCAGGCTT
Product: general substrate transporter
Products: Proton [Cytoplasm]; glycerol-3-phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MNKHIGTLARWRMQIFAVTWLAYAAFYFTRKAFSVAKLGIAEDPSFTLDKMAMANLDAIYLAAYAIGQFTWGMLADRFGP RIVVLGGLLISAAAALVMGSFATLPIFATCMLIQGLAQSTGWSGLCKNLGSFFPSEQRGRVLGLWSSCYAFGGLVASPFA GWWAYTLVGTWHAAFISSAAVVAAVAVLFFIFQRNKPEDVGLPAVEPEPVISAEEAEANSKLSVWEPLKEILRNRTVLVL GLAYFLLKPARYAILLWGPVIVFEQMPSVGKVGAAIIPTAFELAGLLGPIMIGLASDKLFGARRMPACVLSLLALTVTLA LFMGALHTGSVMLVVALLFVMGLTLYGPDSMISGAAAIDFGKAKAGATAAGFVNGCGSVGAVLGGLLPGYFDSVTVFIVF AGCALFSALVLIPHWNSRPVGVMEPRAYVPNRALTVKPLRN
Sequences:
>Translated_441_residues MNKHIGTLARWRMQIFAVTWLAYAAFYFTRKAFSVAKLGIAEDPSFTLDKMAMANLDAIYLAAYAIGQFTWGMLADRFGP RIVVLGGLLISAAAALVMGSFATLPIFATCMLIQGLAQSTGWSGLCKNLGSFFPSEQRGRVLGLWSSCYAFGGLVASPFA GWWAYTLVGTWHAAFISSAAVVAAVAVLFFIFQRNKPEDVGLPAVEPEPVISAEEAEANSKLSVWEPLKEILRNRTVLVL GLAYFLLKPARYAILLWGPVIVFEQMPSVGKVGAAIIPTAFELAGLLGPIMIGLASDKLFGARRMPACVLSLLALTVTLA LFMGALHTGSVMLVVALLFVMGLTLYGPDSMISGAAAIDFGKAKAGATAAGFVNGCGSVGAVLGGLLPGYFDSVTVFIVF AGCALFSALVLIPHWNSRPVGVMEPRAYVPNRALTVKPLRN >Mature_441_residues MNKHIGTLARWRMQIFAVTWLAYAAFYFTRKAFSVAKLGIAEDPSFTLDKMAMANLDAIYLAAYAIGQFTWGMLADRFGP RIVVLGGLLISAAAALVMGSFATLPIFATCMLIQGLAQSTGWSGLCKNLGSFFPSEQRGRVLGLWSSCYAFGGLVASPFA GWWAYTLVGTWHAAFISSAAVVAAVAVLFFIFQRNKPEDVGLPAVEPEPVISAEEAEANSKLSVWEPLKEILRNRTVLVL GLAYFLLKPARYAILLWGPVIVFEQMPSVGKVGAAIIPTAFELAGLLGPIMIGLASDKLFGARRMPACVLSLLALTVTLA LFMGALHTGSVMLVVALLFVMGLTLYGPDSMISGAAAIDFGKAKAGATAAGFVNGCGSVGAVLGGLLPGYFDSVTVFIVF AGCALFSALVLIPHWNSRPVGVMEPRAYVPNRALTVKPLRN
Specific function: Transport protein for sugar phosphate uptake [H]
COG id: COG2271
COG function: function code G; Sugar phosphate permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family [H]
Homologues:
Organism=Homo sapiens, GI38093649, Length=438, Percent_Identity=26.9406392694064, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI46361976, Length=435, Percent_Identity=26.8965517241379, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI223717983, Length=438, Percent_Identity=26.9406392694064, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI256219598, Length=385, Percent_Identity=27.012987012987, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI4503847, Length=385, Percent_Identity=27.012987012987, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI256219483, Length=385, Percent_Identity=27.012987012987, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI49619231, Length=462, Percent_Identity=24.2424242424242, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI256219543, Length=407, Percent_Identity=26.044226044226, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI14150047, Length=310, Percent_Identity=25.4838709677419, Blast_Score=92, Evalue=9e-19, Organism=Homo sapiens, GI256219564, Length=315, Percent_Identity=25.7142857142857, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1788573, Length=423, Percent_Identity=26.7139479905437, Blast_Score=125, Evalue=4e-30, Organism=Escherichia coli, GI87082310, Length=419, Percent_Identity=28.6396181384248, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI2367259, Length=370, Percent_Identity=27.027027027027, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1789152, Length=314, Percent_Identity=23.5668789808917, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1789515, Length=433, Percent_Identity=24.4803695150115, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI2367379, Length=250, Percent_Identity=26, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI2367193, Length=267, Percent_Identity=25.0936329588015, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI133901854, Length=429, Percent_Identity=26.8065268065268, Blast_Score=114, Evalue=8e-26, Organism=Caenorhabditis elegans, GI133901856, Length=429, Percent_Identity=26.8065268065268, Blast_Score=114, Evalue=9e-26, Organism=Caenorhabditis elegans, GI17564202, Length=414, Percent_Identity=26.5700483091787, Blast_Score=111, Evalue=9e-25, Organism=Caenorhabditis elegans, GI133930953, Length=418, Percent_Identity=23.6842105263158, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17542316, Length=408, Percent_Identity=24.0196078431373, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17564204, Length=346, Percent_Identity=26.0115606936416, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI24656866, Length=448, Percent_Identity=25, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI45550478, Length=448, Percent_Identity=25, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI24656861, Length=448, Percent_Identity=25.2232142857143, Blast_Score=119, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000849 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR021159 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46878; Mature: 46878
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKHIGTLARWRMQIFAVTWLAYAAFYFTRKAFSVAKLGIAEDPSFTLDKMAMANLDAIY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHH LAAYAIGQFTWGMLADRFGPRIVVLGGLLISAAAALVMGSFATLPIFATCMLIQGLAQST HHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GWSGLCKNLGSFFPSEQRGRVLGLWSSCYAFGGLVASPFAGWWAYTLVGTWHAAFISSAA CHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VVAAVAVLFFIFQRNKPEDVGLPAVEPEPVISAEEAEANSKLSVWEPLKEILRNRTVLVL HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCHHHH GLAYFLLKPARYAILLWGPVIVFEQMPSVGKVGAAIIPTAFELAGLLGPIMIGLASDKLF HHHHHHHCCCHHEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH GARRMPACVLSLLALTVTLALFMGALHTGSVMLVVALLFVMGLTLYGPDSMISGAAAIDF CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCHHHHCC GKAKAGATAAGFVNGCGSVGAVLGGLLPGYFDSVTVFIVFAGCALFSALVLIPHWNSRPV CCCCCCCCHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GVMEPRAYVPNRALTVKPLRN CCCCCCCCCCCCCEEECCCCC >Mature Secondary Structure MNKHIGTLARWRMQIFAVTWLAYAAFYFTRKAFSVAKLGIAEDPSFTLDKMAMANLDAIY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHH LAAYAIGQFTWGMLADRFGPRIVVLGGLLISAAAALVMGSFATLPIFATCMLIQGLAQST HHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GWSGLCKNLGSFFPSEQRGRVLGLWSSCYAFGGLVASPFAGWWAYTLVGTWHAAFISSAA CHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VVAAVAVLFFIFQRNKPEDVGLPAVEPEPVISAEEAEANSKLSVWEPLKEILRNRTVLVL HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCHHHH GLAYFLLKPARYAILLWGPVIVFEQMPSVGKVGAAIIPTAFELAGLLGPIMIGLASDKLF HHHHHHHCCCHHEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH GARRMPACVLSLLALTVTLALFMGALHTGSVMLVVALLFVMGLTLYGPDSMISGAAAIDF CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCHHHHCC GKAKAGATAAGFVNGCGSVGAVLGGLLPGYFDSVTVFIVFAGCALFSALVLIPHWNSRPV CCCCCCCCHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GVMEPRAYVPNRALTVKPLRN CCCCCCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; glycerol-3-phosphate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + glycerol-3-phosphate [Periplasm] = Proton [Cytoplasm] + glycerol-3-phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]