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The map label for this gene is 77459900

Identifier: 77459900

GI number: 77459900

Start: 4161285

End: 4162691

Strand: Direct

Name: 77459900

Synonym: Pfl01_3678

Alternate gene names: NA

Gene position: 4161285-4162691 (Clockwise)

Preceding gene: 77459898

Following gene: 77459903

Centisome position: 64.63

GC content: 62.4

Gene sequence:

>1407_bases
ATGCTCAATGACAAGGAAAGTCCGTTTTCGCTGACCCTGGCCGAGGGTGGGATAAGCCTGCCAGTCCTGCACTTCAGTGG
CCACGAAGCGCTGAATCAGCCCTTTCGGTTCGAGATCGAAGTCATGGGCCTGGCGCCCGCCTGGTCACCCGGTACGTTGC
TGCATCAGGCAGCATTTTTGCACCTGGATGACGATCACGGAATTCACGGCATCATTCAAAGTGCCAGTTGCGAACACCGC
GCGACGCACCGGATCGCCTACCAACTGGTGCTGATGCCGCATCTGCAAGCGCTGGAGCAACATCCCGTTCGCCGGGTTTT
CACACAACTGAGCGTGCCGGCCATCCTTGAACAACTGCTCAGCGAACATCACCTGCCTGCCCACAGTTACCGGATCGAGA
TGACTGTCGGCCATTACCCTCCGCGCCCGTTCTGTATTCAATACGAAGAAACCGACCTGGCCTTTTTGCAACGGCTTTGC
GAAGAGGAAGGCATCCACTATCACTTCGAACATCAGCCGGACGGTCATGTGGTGGTGTTCGCCGATGACAGCCTGAGCCT
GCCGCAACAACCGACAGCGATGGCTTTCAACACGCAGATCGATGCGCCGGCAACCGGCCTCAGCAGCCTGTTCCAGCGCC
ATGAGGCGGTGCTGCCTCAAATGCCAGTCGGCGTACGTGAGCGAGGGCAATCGATTACGGGCCACGAGGCCGCCAATCAC
ACGCTGGGCAGTGCCGTCGCCCCACCGGGATTTCTGCCGACTGCGCAACGTCACGCGGCCCAACGCAGTCGTCGCCTGCT
GGAACGCCAACGCTGCCGGTCGCGTTCGATTCAGGGCCGCAGCGATTGTCCGCGACTGCTCAGTGGGCGTCTGTTGCAAG
TCATGGAGCACCCGGTGAGCGCGTTCAACGAGCAGTGGCTGATCACCGACTTGCGTCATCAGGGTCAGCAACCTTCGATA
CTCGACCCGATCCCCACGGTTCGCCGCTATCACAACGACTTCTGCGCGCTGCCCTGGTCGACCCCGTTTCGCCCGCCGCC
GAAACAAGAGCGTCCGAGCATCCCGGGGTATCAGCCGGCGCAAGTGCTCGGCGTGCCGGGGCAACCGGCGCAAGTGGACG
CTCAGGGCCGGATCGTCGTCCGGTTATGGCCCGATCAGCCACACTCCGACGCAAGCGAAGGGCTGTGGTTGCCGGTGGTC
ATGCCTCATGCCGGCGGTGGCCTGCCTCGGGAAAATCTGCCCTGCGCCGGCAGCGAGGTCTGGGTCAGTTTTCTCGACAG
CGATCCCGAACGGCCGATCCTCTGCCTCGACGCTTGTCGGCTCCGCCAGGCACCGCCGACAGAAAACGAACCCGACGACG
ACCTCCTGCTCGACTGGCTGCTCAACCGTTCCGCCCCGCCAAGCTGA

Upstream 100 bases:

>100_bases
GCCTTGTAGGGCGATTCTGAAAAACTGGTTTGCCACGTCCATTCGACGTCGTGTTTTCGTACCCTCTGTCGCCCGTATTG
CCTGAACAGAGCCCGTCCGA

Downstream 100 bases:

>100_bases
CGCTCAAGCCTTGTCGGCCTTGCCCGCCGCCGCTGCGAATTTCGCCAGACGCACGTCAAGGTGCCGGGGCCGCCGACCGT
GATCCTCGGCGCGTTCCTTG

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; VgrG-Like Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; Vgr Protein; Rhs-Family Protein; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Protein VgrE; Rhs Element Protein; Vgr Related Protein; Vrg Family Protein; VrgG Protein; Rhs Protein; VgrG Family T6SS G; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MLNDKESPFSLTLAEGGISLPVLHFSGHEALNQPFRFEIEVMGLAPAWSPGTLLHQAAFLHLDDDHGIHGIIQSASCEHR
ATHRIAYQLVLMPHLQALEQHPVRRVFTQLSVPAILEQLLSEHHLPAHSYRIEMTVGHYPPRPFCIQYEETDLAFLQRLC
EEEGIHYHFEHQPDGHVVVFADDSLSLPQQPTAMAFNTQIDAPATGLSSLFQRHEAVLPQMPVGVRERGQSITGHEAANH
TLGSAVAPPGFLPTAQRHAAQRSRRLLERQRCRSRSIQGRSDCPRLLSGRLLQVMEHPVSAFNEQWLITDLRHQGQQPSI
LDPIPTVRRYHNDFCALPWSTPFRPPPKQERPSIPGYQPAQVLGVPGQPAQVDAQGRIVVRLWPDQPHSDASEGLWLPVV
MPHAGGGLPRENLPCAGSEVWVSFLDSDPERPILCLDACRLRQAPPTENEPDDDLLLDWLLNRSAPPS

Sequences:

>Translated_468_residues
MLNDKESPFSLTLAEGGISLPVLHFSGHEALNQPFRFEIEVMGLAPAWSPGTLLHQAAFLHLDDDHGIHGIIQSASCEHR
ATHRIAYQLVLMPHLQALEQHPVRRVFTQLSVPAILEQLLSEHHLPAHSYRIEMTVGHYPPRPFCIQYEETDLAFLQRLC
EEEGIHYHFEHQPDGHVVVFADDSLSLPQQPTAMAFNTQIDAPATGLSSLFQRHEAVLPQMPVGVRERGQSITGHEAANH
TLGSAVAPPGFLPTAQRHAAQRSRRLLERQRCRSRSIQGRSDCPRLLSGRLLQVMEHPVSAFNEQWLITDLRHQGQQPSI
LDPIPTVRRYHNDFCALPWSTPFRPPPKQERPSIPGYQPAQVLGVPGQPAQVDAQGRIVVRLWPDQPHSDASEGLWLPVV
MPHAGGGLPRENLPCAGSEVWVSFLDSDPERPILCLDACRLRQAPPTENEPDDDLLLDWLLNRSAPPS
>Mature_468_residues
MLNDKESPFSLTLAEGGISLPVLHFSGHEALNQPFRFEIEVMGLAPAWSPGTLLHQAAFLHLDDDHGIHGIIQSASCEHR
ATHRIAYQLVLMPHLQALEQHPVRRVFTQLSVPAILEQLLSEHHLPAHSYRIEMTVGHYPPRPFCIQYEETDLAFLQRLC
EEEGIHYHFEHQPDGHVVVFADDSLSLPQQPTAMAFNTQIDAPATGLSSLFQRHEAVLPQMPVGVRERGQSITGHEAANH
TLGSAVAPPGFLPTAQRHAAQRSRRLLERQRCRSRSIQGRSDCPRLLSGRLLQVMEHPVSAFNEQWLITDLRHQGQQPSI
LDPIPTVRRYHNDFCALPWSTPFRPPPKQERPSIPGYQPAQVLGVPGQPAQVDAQGRIVVRLWPDQPHSDASEGLWLPVV
MPHAGGGLPRENLPCAGSEVWVSFLDSDPERPILCLDACRLRQAPPTENEPDDDLLLDWLLNRSAPPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52330; Mature: 52330

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNDKESPFSLTLAEGGISLPVLHFSGHEALNQPFRFEIEVMGLAPAWSPGTLLHQAAFL
CCCCCCCCEEEEEECCCCEEEEEEECCHHHHCCCCEEEEEEEEECCCCCCHHHHHHEEEE
HLDDDHGIHGIIQSASCEHRATHRIAYQLVLMPHLQALEQHPVRRVFTQLSVPAILEQLL
EECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHH
SEHHLPAHSYRIEMTVGHYPPRPFCIQYEETDLAFLQRLCEEEGIHYHFEHQPDGHVVVF
HHCCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCEEEE
ADDSLSLPQQPTAMAFNTQIDAPATGLSSLFQRHEAVLPQMPVGVRERGQSITGHEAANH
ECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHCC
TLGSAVAPPGFLPTAQRHAAQRSRRLLERQRCRSRSIQGRSDCPRLLSGRLLQVMEHPVS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
AFNEQWLITDLRHQGQQPSILDPIPTVRRYHNDFCALPWSTPFRPPPKQERPSIPGYQPA
HHCCCEEEHHHHHCCCCCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
QVLGVPGQPAQVDAQGRIVVRLWPDQPHSDASEGLWLPVVMPHAGGGLPRENLPCAGSEV
EEEECCCCCCEECCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHH
WVSFLDSDPERPILCLDACRLRQAPPTENEPDDDLLLDWLLNRSAPPS
HHHHHCCCCCCCEEEEEHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLNDKESPFSLTLAEGGISLPVLHFSGHEALNQPFRFEIEVMGLAPAWSPGTLLHQAAFL
CCCCCCCCEEEEEECCCCEEEEEEECCHHHHCCCCEEEEEEEEECCCCCCHHHHHHEEEE
HLDDDHGIHGIIQSASCEHRATHRIAYQLVLMPHLQALEQHPVRRVFTQLSVPAILEQLL
EECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHH
SEHHLPAHSYRIEMTVGHYPPRPFCIQYEETDLAFLQRLCEEEGIHYHFEHQPDGHVVVF
HHCCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCEEEE
ADDSLSLPQQPTAMAFNTQIDAPATGLSSLFQRHEAVLPQMPVGVRERGQSITGHEAANH
ECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHCC
TLGSAVAPPGFLPTAQRHAAQRSRRLLERQRCRSRSIQGRSDCPRLLSGRLLQVMEHPVS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
AFNEQWLITDLRHQGQQPSILDPIPTVRRYHNDFCALPWSTPFRPPPKQERPSIPGYQPA
HHCCCEEEHHHHHCCCCCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
QVLGVPGQPAQVDAQGRIVVRLWPDQPHSDASEGLWLPVVMPHAGGGLPRENLPCAGSEV
EEEECCCCCCEECCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHH
WVSFLDSDPERPILCLDACRLRQAPPTENEPDDDLLLDWLLNRSAPPS
HHHHHCCCCCCCEEEEEHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA