Click here to switch to the map view.

The map label for this gene is yceJ [H]

Identifier: 77459886

GI number: 77459886

Start: 4148050

End: 4148595

Strand: Reverse

Name: yceJ [H]

Synonym: Pfl01_3664

Alternate gene names: 77459886

Gene position: 4148595-4148050 (Counterclockwise)

Preceding gene: 77459887

Following gene: 77459882

Centisome position: 64.44

GC content: 62.27

Gene sequence:

>546_bases
ATGAGCACGCAACCAACTCATTTCAATCCGCTGGCGCGGTTGCTGCACTGGCTGATGGCGTTGATGATCATCGCAATGTT
GTTCATCGGCGCCGGTATGGTGACCTCGGTGTCGGCGCGGCATGAATGGCTGATCAATCTGCACAAACCGTTGGGTATCG
CGATACTCGCTTTGGTGATCGTGCGCATTCTGGTGCGACTGGGCACCCGTCAGCCGCCGCTGCCAGCGGATCTGCCGGGT
TGGCAAGTGATGGCGGCCAAGGCCTCTCATCTGTTGCTGTACGCGCTGATGCTGGTGTTGCCGCTGTTGGGCTGGGCGAT
GATCAGCGCGGCGGGGGACCCGGTGATGCTCGGCACGTCCCTGCAATTGCCGTCGATCGTGCCAGCCGATGCGCAGGTGT
TTGCGTTACTGCGCAAGGCTCACGGGTATCTGGCGTATCTGTTGTTCCTGACCGTGCTGCTGCACCTGGCGGCGGCGCTG
TTCCATGGCTGGGTGCGCCGCGACGAGGTGCTCGACAGCATGCTGCGGGGACGCAATCGCGGTTGA

Upstream 100 bases:

>100_bases
ATCCGTTGCTGGCCGCACGCTCGGCCGGTTATGCCGATTCCTACCTGCGTCGCACCAGCGAAGTCAGCCAACTGCCAACC
GGCAAAAAGGAGGCTCGCCC

Downstream 100 bases:

>100_bases
TAGTGTGTCAGTCCGACGTGGCGAGGGCGCAAGCAGCCTCGCCACGTTTCCGGGTGGCCAGCGTTCGCCACCAGTACAGC
AGCGCGACCACGTTGATTGC

Product: cytochrome B561

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSTQPTHFNPLARLLHWLMALMIIAMLFIGAGMVTSVSARHEWLINLHKPLGIAILALVIVRILVRLGTRQPPLPADLPG
WQVMAAKASHLLLYALMLVLPLLGWAMISAAGDPVMLGTSLQLPSIVPADAQVFALLRKAHGYLAYLLFLTVLLHLAAAL
FHGWVRRDEVLDSMLRGRNRG

Sequences:

>Translated_181_residues
MSTQPTHFNPLARLLHWLMALMIIAMLFIGAGMVTSVSARHEWLINLHKPLGIAILALVIVRILVRLGTRQPPLPADLPG
WQVMAAKASHLLLYALMLVLPLLGWAMISAAGDPVMLGTSLQLPSIVPADAQVFALLRKAHGYLAYLLFLTVLLHLAAAL
FHGWVRRDEVLDSMLRGRNRG
>Mature_180_residues
STQPTHFNPLARLLHWLMALMIIAMLFIGAGMVTSVSARHEWLINLHKPLGIAILALVIVRILVRLGTRQPPLPADLPGW
QVMAAKASHLLLYALMLVLPLLGWAMISAAGDPVMLGTSLQLPSIVPADAQVFALLRKAHGYLAYLLFLTVLLHLAAALF
HGWVRRDEVLDSMLRGRNRG

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI1787296, Length=180, Percent_Identity=30, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI87082013, Length=176, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 19915; Mature: 19783

Theoretical pI: Translated: 11.38; Mature: 11.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTQPTHFNPLARLLHWLMALMIIAMLFIGAGMVTSVSARHEWLINLHKPLGIAILALVI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VRILVRLGTRQPPLPADLPGWQVMAAKASHLLLYALMLVLPLLGWAMISAAGDPVMLGTS
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
LQLPSIVPADAQVFALLRKAHGYLAYLLFLTVLLHLAAALFHGWVRRDEVLDSMLRGRNR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
G
C
>Mature Secondary Structure 
STQPTHFNPLARLLHWLMALMIIAMLFIGAGMVTSVSARHEWLINLHKPLGIAILALVI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VRILVRLGTRQPPLPADLPGWQVMAAKASHLLLYALMLVLPLLGWAMISAAGDPVMLGTS
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
LQLPSIVPADAQVFALLRKAHGYLAYLLFLTVLLHLAAALFHGWVRRDEVLDSMLRGRNR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]