Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77459584
Identifier: 77459584
GI number: 77459584
Start: 3837795
End: 3839009
Strand: Direct
Name: 77459584
Synonym: Pfl01_3362
Alternate gene names: NA
Gene position: 3837795-3839009 (Clockwise)
Preceding gene: 77459582
Following gene: 77459586
Centisome position: 59.61
GC content: 61.4
Gene sequence:
>1215_bases ATGCGTAAGGATTACCTGGCTTTTTTCATCTCGCTGTTCCTCTCGCGGCTGGCGGATCAGATCCTGTTGTTCATCGTGCC GCTGGTGGTATTCCAGACCACCAACAGCGCGTCTTGGGCGGGGCTTGCATTCTTCGTCGAGTCGCTGCCGCGCTTTCTCG CGTTTCCGTTGTGCGGGGCCCTGTGCGACAAGTTCTCGCCCATCAGAATTCTGCACATCAGTCAGGTCTACCGGGCGCTG CTCTGCGTGTTGGCGGTAGGGCTTTATGCCGTCTTCGGCGGTATCGCGTGGCTTGTGGTGCTGTCTGCGCTGTGCGGCGT GCTGACCACTCAGGGCATCATGGCCCGCGAAGTGCTGATGCCGCATATTTTCCAGCACTACAGCTACACCAAAACCCTGT CCTACTCGCAGATAGCCGACCAGACCGGACTGGTTCTGGGCCCCTTGGTGGCGGCATTGCTGCTGGAGGTTTCGGCCTGG CACTGGGTGGTGCTGTGGGTGGCCGGGCTGTTCTTGCTGGCCGACCTGAGCATGCGGGTGTGGCAACGTTTCAGTCGTAT CACCCTCGAGGTGTTCGAGCAGCATCAGGACATCTGGCTGCAGCCTCTGCGCATCGCGTTCAGGCATATCCGCGAACGGG CGGAGCTGAAAAAGATCATCGCCCTGGCGGTCGGGGTCAACCTGATTGTCGGGGTCACTCTGGCCACTTCGGCGGCCATG GTGCTCGGTCAATACAGCGCCGGCAAGGACGACTACGCCGTGCTGCAAGCGGCTGGCGCGGTGACCACCATCGTGATTCT GTTTTTCCTCGCCCGGGTGGTGTTGCCGTTGCGCGTACTGGGTGGGGTTGCCTGTTCGATGCTTGCCGCCGGCGCCTTCA TCAGCGCCCTGAGCCCGAACCTGGCGGGTTATGTGCTGGGTTTCCTGCTGATCGTCGGCTTCGACAAGATGTTCAACGTC TACATGCGCAGCATTCGCCAGCGAGTCATTCCCCCCCAGGACTTCGGCAAGACAGTGGGCGTGATCACCCTGCTCAACAA CTTGTCGCAACCGCTGGCCGGTCTGCTGGTCGCACTGCTCGCCGCGCCATTGGGGACACAACGTGTGATTCTGATTCTGG CCGTGCTGGCGACGCTGCTGGGCGTAGCGGCGCTCTGGTGGTTTGCCAGAGTCCGTAACGCCCCCGTCACGTCGATTCTC GAGACCGAGCAGTAA
Upstream 100 bases:
>100_bases GCCTTTCTTCAATCAGATATGACCGCCGCTTGCGGAGGCGACGGTTTCTGGTTTCATATCACGCGCAAAGCGGCCAAAAC GCCGATCGACAGGAGTCATC
Downstream 100 bases:
>100_bases CGGATTTCACTATCGTGGAGCGATGTCCGAAAACAAAAAAACCGCAGCCTGTGAAGGACTGCGGTTTTTTTTGGACTCAG ATCACGCGACGATATCGGTC
Product: major facilitator transporter
Products: NA
Alternate protein names: Integral Membrane Protein; Transporter MFS Superfamily
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MRKDYLAFFISLFLSRLADQILLFIVPLVVFQTTNSASWAGLAFFVESLPRFLAFPLCGALCDKFSPIRILHISQVYRAL LCVLAVGLYAVFGGIAWLVVLSALCGVLTTQGIMAREVLMPHIFQHYSYTKTLSYSQIADQTGLVLGPLVAALLLEVSAW HWVVLWVAGLFLLADLSMRVWQRFSRITLEVFEQHQDIWLQPLRIAFRHIRERAELKKIIALAVGVNLIVGVTLATSAAM VLGQYSAGKDDYAVLQAAGAVTTIVILFFLARVVLPLRVLGGVACSMLAAGAFISALSPNLAGYVLGFLLIVGFDKMFNV YMRSIRQRVIPPQDFGKTVGVITLLNNLSQPLAGLLVALLAAPLGTQRVILILAVLATLLGVAALWWFARVRNAPVTSIL ETEQ
Sequences:
>Translated_404_residues MRKDYLAFFISLFLSRLADQILLFIVPLVVFQTTNSASWAGLAFFVESLPRFLAFPLCGALCDKFSPIRILHISQVYRAL LCVLAVGLYAVFGGIAWLVVLSALCGVLTTQGIMAREVLMPHIFQHYSYTKTLSYSQIADQTGLVLGPLVAALLLEVSAW HWVVLWVAGLFLLADLSMRVWQRFSRITLEVFEQHQDIWLQPLRIAFRHIRERAELKKIIALAVGVNLIVGVTLATSAAM VLGQYSAGKDDYAVLQAAGAVTTIVILFFLARVVLPLRVLGGVACSMLAAGAFISALSPNLAGYVLGFLLIVGFDKMFNV YMRSIRQRVIPPQDFGKTVGVITLLNNLSQPLAGLLVALLAAPLGTQRVILILAVLATLLGVAALWWFARVRNAPVTSIL ETEQ >Mature_404_residues MRKDYLAFFISLFLSRLADQILLFIVPLVVFQTTNSASWAGLAFFVESLPRFLAFPLCGALCDKFSPIRILHISQVYRAL LCVLAVGLYAVFGGIAWLVVLSALCGVLTTQGIMAREVLMPHIFQHYSYTKTLSYSQIADQTGLVLGPLVAALLLEVSAW HWVVLWVAGLFLLADLSMRVWQRFSRITLEVFEQHQDIWLQPLRIAFRHIRERAELKKIIALAVGVNLIVGVTLATSAAM VLGQYSAGKDDYAVLQAAGAVTTIVILFFLARVVLPLRVLGGVACSMLAAGAFISALSPNLAGYVLGFLLIVGFDKMFNV YMRSIRQRVIPPQDFGKTVGVITLLNNLSQPLAGLLVALLAAPLGTQRVILILAVLATLLGVAALWWFARVRNAPVTSIL ETEQ
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44299; Mature: 44299
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKDYLAFFISLFLSRLADQILLFIVPLVVFQTTNSASWAGLAFFVESLPRFLAFPLCGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LCDKFSPIRILHISQVYRALLCVLAVGLYAVFGGIAWLVVLSALCGVLTTQGIMAREVLM HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PHIFQHYSYTKTLSYSQIADQTGLVLGPLVAALLLEVSAWHWVVLWVAGLFLLADLSMRV HHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQRFSRITLEVFEQHQDIWLQPLRIAFRHIRERAELKKIIALAVGVNLIVGVTLATSAAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGQYSAGKDDYAVLQAAGAVTTIVILFFLARVVLPLRVLGGVACSMLAAGAFISALSPN HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LAGYVLGFLLIVGFDKMFNVYMRSIRQRVIPPQDFGKTVGVITLLNNLSQPLAGLLVALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAPLGTQRVILILAVLATLLGVAALWWFARVRNAPVTSILETEQ HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC >Mature Secondary Structure MRKDYLAFFISLFLSRLADQILLFIVPLVVFQTTNSASWAGLAFFVESLPRFLAFPLCGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LCDKFSPIRILHISQVYRALLCVLAVGLYAVFGGIAWLVVLSALCGVLTTQGIMAREVLM HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PHIFQHYSYTKTLSYSQIADQTGLVLGPLVAALLLEVSAWHWVVLWVAGLFLLADLSMRV HHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQRFSRITLEVFEQHQDIWLQPLRIAFRHIRERAELKKIIALAVGVNLIVGVTLATSAAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGQYSAGKDDYAVLQAAGAVTTIVILFFLARVVLPLRVLGGVACSMLAAGAFISALSPN HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LAGYVLGFLLIVGFDKMFNVYMRSIRQRVIPPQDFGKTVGVITLLNNLSQPLAGLLVALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAPLGTQRVILILAVLATLLGVAALWWFARVRNAPVTSILETEQ HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA