Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77459582
Identifier: 77459582
GI number: 77459582
Start: 3836151
End: 3837137
Strand: Direct
Name: 77459582
Synonym: Pfl01_3360
Alternate gene names: NA
Gene position: 3836151-3837137 (Clockwise)
Preceding gene: 77459581
Following gene: 77459584
Centisome position: 59.58
GC content: 44.68
Gene sequence:
>987_bases GTGATTTCTACACCCCAGTTCGATGAAGCTGAACTACTAACCCTGATAGATAGAATGTTGCGCACACTTCCAGGCGGAAA CGGAGGAAAAGCAAAAATCAGACAAGTTACGCAGAGGCAGGAACGCTACAGGGGTGGTTATGATGCTGTCGCAACAAGCG TCAAGCCTTTTTACATACAGGCTAAAACTTCAAGCTTCCATTCCTACAAATCAAGCAGCGAAATAATCTCTTCGCGAGAA TCAATTCCGTTAAATACCAAACCAGGCGTTTTCACATTTTATCTACGCAAGCACAAGGGAACTGACGAGCCGCTGCAACA CAATGCATTGTATTGGTTGTCACTTCGCTCTACTGCAGCCTATGTATGCCCAACTTTCGTTTCTGAAAACGAACTCGACA CCCGAATTGATTTGGCCATTGTGTTAAAACGGCATCAGGTCTGGGAATATCTCAATAACGATTACACGGATGCCAGCACT GGCAAAACACAGTCTTTTTTTACTCGACACTTCAATGGGTTGATCACCATCGTTCCTCATCGTTTGGTAGATCATTACCT CCACCGCTATAGCTACGACAAATCCACCACGCCGAGTATCGTTTTTCACTCAGATCCAGAATCTGTCGGCTTCGCACAAC CATGGAACTCATTTTTTAACGGTCTGACAAATTCAAGCCAGAGTCCAGACGTGACATCCGAGAATAAGGTATTTCAACCC GTCGGGATCGATACGCTCAGAAACATCCAGCTCAACTGGATAGATGAAGCGTTTGACACTGAGATCTCTGGTCTGATGAT GAAACCCTCGGATGTTTCGCAGGCGCTCCACTCGGCCAACCTTTCAAACTCTACAAATTTCGACAGATCTACCAGTGCGA TAAACTATTTGAGAAAACTGGACGGACTTGATCTTTCGGCTTTCTTTGGTTCGTTTCTCAAAGAAAAATATAGCATCCAT CAAAATATCTTGTTCCAAAGCGAGTGA
Upstream 100 bases:
>100_bases GACAAATTGATGGCACTTCAATACCATCTTGCTTCCAGCAGATACTCCAGCCTCTTCACTCGATCAGCGAAATATCGCCA CAGCCATCAAGGACGAAAAC
Downstream 100 bases:
>100_bases TCGACTTCGTTACTCCATCAATCTCCAAGTCGACTCTTCTCCTGCTTTCATGAATGCATGACTATACAAGCCCGTTATCG ATTTCCGACTGACGGGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MISTPQFDEAELLTLIDRMLRTLPGGNGGKAKIRQVTQRQERYRGGYDAVATSVKPFYIQAKTSSFHSYKSSSEIISSRE SIPLNTKPGVFTFYLRKHKGTDEPLQHNALYWLSLRSTAAYVCPTFVSENELDTRIDLAIVLKRHQVWEYLNNDYTDAST GKTQSFFTRHFNGLITIVPHRLVDHYLHRYSYDKSTTPSIVFHSDPESVGFAQPWNSFFNGLTNSSQSPDVTSENKVFQP VGIDTLRNIQLNWIDEAFDTEISGLMMKPSDVSQALHSANLSNSTNFDRSTSAINYLRKLDGLDLSAFFGSFLKEKYSIH QNILFQSE
Sequences:
>Translated_328_residues MISTPQFDEAELLTLIDRMLRTLPGGNGGKAKIRQVTQRQERYRGGYDAVATSVKPFYIQAKTSSFHSYKSSSEIISSRE SIPLNTKPGVFTFYLRKHKGTDEPLQHNALYWLSLRSTAAYVCPTFVSENELDTRIDLAIVLKRHQVWEYLNNDYTDAST GKTQSFFTRHFNGLITIVPHRLVDHYLHRYSYDKSTTPSIVFHSDPESVGFAQPWNSFFNGLTNSSQSPDVTSENKVFQP VGIDTLRNIQLNWIDEAFDTEISGLMMKPSDVSQALHSANLSNSTNFDRSTSAINYLRKLDGLDLSAFFGSFLKEKYSIH QNILFQSE >Mature_328_residues MISTPQFDEAELLTLIDRMLRTLPGGNGGKAKIRQVTQRQERYRGGYDAVATSVKPFYIQAKTSSFHSYKSSSEIISSRE SIPLNTKPGVFTFYLRKHKGTDEPLQHNALYWLSLRSTAAYVCPTFVSENELDTRIDLAIVLKRHQVWEYLNNDYTDAST GKTQSFFTRHFNGLITIVPHRLVDHYLHRYSYDKSTTPSIVFHSDPESVGFAQPWNSFFNGLTNSSQSPDVTSENKVFQP VGIDTLRNIQLNWIDEAFDTEISGLMMKPSDVSQALHSANLSNSTNFDRSTSAINYLRKLDGLDLSAFFGSFLKEKYSIH QNILFQSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37310; Mature: 37310
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISTPQFDEAELLTLIDRMLRTLPGGNGGKAKIRQVTQRQERYRGGYDAVATSVKPFYIQ CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEE AKTSSFHSYKSSSEIISSRESIPLNTKPGVFTFYLRKHKGTDEPLQHNALYWLSLRSTAA EECCCHHHHCCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCHH YVCPTFVSENELDTRIDLAIVLKRHQVWEYLNNDYTDASTGKTQSFFTRHFNGLITIVPH HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCEEEEHHH RLVDHYLHRYSYDKSTTPSIVFHSDPESVGFAQPWNSFFNGLTNSSQSPDVTSENKVFQP HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEECC VGIDTLRNIQLNWIDEAFDTEISGLMMKPSDVSQALHSANLSNSTNFDRSTSAINYLRKL CCCHHHHCCEEEEHHHHHCCHHHCEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH DGLDLSAFFGSFLKEKYSIHQNILFQSE CCCCHHHHHHHHHHHHHHHHHHHEECCC >Mature Secondary Structure MISTPQFDEAELLTLIDRMLRTLPGGNGGKAKIRQVTQRQERYRGGYDAVATSVKPFYIQ CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEE AKTSSFHSYKSSSEIISSRESIPLNTKPGVFTFYLRKHKGTDEPLQHNALYWLSLRSTAA EECCCHHHHCCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCHH YVCPTFVSENELDTRIDLAIVLKRHQVWEYLNNDYTDASTGKTQSFFTRHFNGLITIVPH HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCEEEEHHH RLVDHYLHRYSYDKSTTPSIVFHSDPESVGFAQPWNSFFNGLTNSSQSPDVTSENKVFQP HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEECC VGIDTLRNIQLNWIDEAFDTEISGLMMKPSDVSQALHSANLSNSTNFDRSTSAINYLRKL CCCHHHHCCEEEEHHHHHCCHHHCEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH DGLDLSAFFGSFLKEKYSIHQNILFQSE CCCCHHHHHHHHHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA