Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is proP [H]
Identifier: 77459581
GI number: 77459581
Start: 3834364
End: 3835986
Strand: Direct
Name: proP [H]
Synonym: Pfl01_3359
Alternate gene names: 77459581
Gene position: 3834364-3835986 (Clockwise)
Preceding gene: 77459580
Following gene: 77459582
Centisome position: 59.55
GC content: 61.98
Gene sequence:
>1623_bases ATGTCAGAACACGTTCAGCCACTGGATGCCGTGCGCAGCACGGACGCCAGCCCCGATACCCGAAAGGTCATCTTCGCCTC GTCCCTGGGGACGGTGTTCGAGTGGTATGACTTCTTTCTCTACGGCGCCCTGGCGGCGGTGATCAGCAAGCAGTTCTTCG CCGGGGTCAACGACACCACCGCGTTCATCTTCGCGCTGATGGCGTTCGCCGCAGGCTTCATCGTGCGGCCGTTCGGGGCG CTGGTGTTCGGTCGGTTGGGGGACATGATCGGGCGCAAATACACGTTCCTGGCGACCATCATCCTGATGGGCGTGGCGAC GTTCGCCGTGGGCCTGCTGCCGACCTACGCCAGCATCGGCATCGCCGCGCCGATCATTCTGGTGGTGCTGCGCATGCTGC AGGGCCTGGCCCTCGGCGGCGAATACGGCGGCGCTGCGACTTACGTGGCGGAGCACGCGCCGATCGGCAAGCGCGGCTTC CACACCAGTTGGATTCAATCCACTGCCACCCTCGGTCTGCTGCTGTCATTGCTGGTGGTGCTGGGTTGCCGCTACTTCAC CGGCGATCAGTTCGAAGTCTGGGGCTGGCGCATTCCGTTCCTGCTGTCGATCGTGCTGCTGGGCATCTCCACCTGGATTC GCCTGAGCCTGCACGAGTCGCCGGCCTATCTGAAAATGAAAGAGGAAGGCAAGGCCAGCAAGGCGCCGATCCGCGAATCC TTCGGCAAATGGGAAAACCTCAAGGTCGTGCTGATCGCCCTGTTCAGCATCAACGCCGGCCAGGCGGTGACCTTTTATGC GGCGCAGTTCTACGTGCTGTTCTTCCTCACCCAGTTCCTGAAAATGGACCCGGCGGTGGCCAACAGTCTGCTGATAATCA GCGTGGTGATCGGCGCGCCGTTCTTCATCATTTTCGGTTGGCTGTCGGACAAGGTCGGGCGCAAACCGGTGCTGATGCTT GGCTTGCTGCTGGCCACCGCGCTGTACTTCCCGATCTTCAAATCCCTGGCCCACTACGCCAACCCGGCCATCGACCACGC CAGCCGACAGGCACCAATCACCGTGGTGGCGGATCCGGCGACCTGCACCTTCCAGTTCGATCCGGTGGGCAAGGCCAAAT TCGACAGCCCGTGCGACAAGGTCAAGACCTTCCTGGTCAAGCAAGGCCTGCCCTACTCCAGCGTCGCCGCCCCGGCGGGC AGCACGGTGCAAGTGAGCGTCGGCGATGTGAAACTCGACGGCTTCGACGAAGCAGCCTTACGCGGCGCCATCACCCTCGC CGGTTATCCGCAACAGGCTGACCTGCAGCAGATCAACAAACCGATGATCGTGGCCCTGATCGTCGGCCTGATCATCATCT CCGCCATGTGCTACGGCCCGCTCGCGGCGCTGATGGTCGAACTGTTTCCGACCCGCATCCGCTACACCTCGATGTCCCTG CCGTATCACATTGGCAACGGCTGGTTCGGCGGTTTCCTGCCCACCGTGTCGTTTGCGCTGGTGGTGTACACCGGGGATAT CTTCTACGGGCTGTGGTACCCGGTGCTGATTACAGGGGTGAGCCTGGTGGTGGGGATGATTTGCTTGCGTGAGACCAAGA ATATCGACCTCGACAAGAACTGA
Upstream 100 bases:
>100_bases GCTCTCAAAAAGGGCATATTTGATTCAAGGACATCGCGCATCACCCGGACACGCAACACCAGTGGAAACAACAAAAACAA TCACTGTGAGGGATACCGAT
Downstream 100 bases:
>100_bases TACATCCACTAAGCCGCTTCAAGTTAAACCTTGAAGCGGCTTTTTTTGCTGCACTTTAGTAATCGACAAATTGATGGCAC TTCAATACCATCTTGCTTCC
Product: general substrate transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 540; Mature: 539
Protein sequence:
>540_residues MSEHVQPLDAVRSTDASPDTRKVIFASSLGTVFEWYDFFLYGALAAVISKQFFAGVNDTTAFIFALMAFAAGFIVRPFGA LVFGRLGDMIGRKYTFLATIILMGVATFAVGLLPTYASIGIAAPIILVVLRMLQGLALGGEYGGAATYVAEHAPIGKRGF HTSWIQSTATLGLLLSLLVVLGCRYFTGDQFEVWGWRIPFLLSIVLLGISTWIRLSLHESPAYLKMKEEGKASKAPIRES FGKWENLKVVLIALFSINAGQAVTFYAAQFYVLFFLTQFLKMDPAVANSLLIISVVIGAPFFIIFGWLSDKVGRKPVLML GLLLATALYFPIFKSLAHYANPAIDHASRQAPITVVADPATCTFQFDPVGKAKFDSPCDKVKTFLVKQGLPYSSVAAPAG STVQVSVGDVKLDGFDEAALRGAITLAGYPQQADLQQINKPMIVALIVGLIIISAMCYGPLAALMVELFPTRIRYTSMSL PYHIGNGWFGGFLPTVSFALVVYTGDIFYGLWYPVLITGVSLVVGMICLRETKNIDLDKN
Sequences:
>Translated_540_residues MSEHVQPLDAVRSTDASPDTRKVIFASSLGTVFEWYDFFLYGALAAVISKQFFAGVNDTTAFIFALMAFAAGFIVRPFGA LVFGRLGDMIGRKYTFLATIILMGVATFAVGLLPTYASIGIAAPIILVVLRMLQGLALGGEYGGAATYVAEHAPIGKRGF HTSWIQSTATLGLLLSLLVVLGCRYFTGDQFEVWGWRIPFLLSIVLLGISTWIRLSLHESPAYLKMKEEGKASKAPIRES FGKWENLKVVLIALFSINAGQAVTFYAAQFYVLFFLTQFLKMDPAVANSLLIISVVIGAPFFIIFGWLSDKVGRKPVLML GLLLATALYFPIFKSLAHYANPAIDHASRQAPITVVADPATCTFQFDPVGKAKFDSPCDKVKTFLVKQGLPYSSVAAPAG STVQVSVGDVKLDGFDEAALRGAITLAGYPQQADLQQINKPMIVALIVGLIIISAMCYGPLAALMVELFPTRIRYTSMSL PYHIGNGWFGGFLPTVSFALVVYTGDIFYGLWYPVLITGVSLVVGMICLRETKNIDLDKN >Mature_539_residues SEHVQPLDAVRSTDASPDTRKVIFASSLGTVFEWYDFFLYGALAAVISKQFFAGVNDTTAFIFALMAFAAGFIVRPFGAL VFGRLGDMIGRKYTFLATIILMGVATFAVGLLPTYASIGIAAPIILVVLRMLQGLALGGEYGGAATYVAEHAPIGKRGFH TSWIQSTATLGLLLSLLVVLGCRYFTGDQFEVWGWRIPFLLSIVLLGISTWIRLSLHESPAYLKMKEEGKASKAPIRESF GKWENLKVVLIALFSINAGQAVTFYAAQFYVLFFLTQFLKMDPAVANSLLIISVVIGAPFFIIFGWLSDKVGRKPVLMLG LLLATALYFPIFKSLAHYANPAIDHASRQAPITVVADPATCTFQFDPVGKAKFDSPCDKVKTFLVKQGLPYSSVAAPAGS TVQVSVGDVKLDGFDEAALRGAITLAGYPQQADLQQINKPMIVALIVGLIIISAMCYGPLAALMVELFPTRIRYTSMSLP YHIGNGWFGGFLPTVSFALVVYTGDIFYGLWYPVLITGVSLVVGMICLRETKNIDLDKN
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=325, Percent_Identity=36.9230769230769, Blast_Score=196, Evalue=4e-51, Organism=Escherichia coli, GI1788292, Length=323, Percent_Identity=37.4613003095975, Blast_Score=194, Evalue=1e-50, Organism=Escherichia coli, GI1788942, Length=346, Percent_Identity=33.5260115606936, Blast_Score=157, Evalue=2e-39, Organism=Escherichia coli, GI1789941, Length=355, Percent_Identity=34.9295774647887, Blast_Score=145, Evalue=7e-36, Organism=Escherichia coli, GI87082404, Length=324, Percent_Identity=25.9259259259259, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI87082231, Length=238, Percent_Identity=26.890756302521, Blast_Score=82, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 58674; Mature: 58543
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHVQPLDAVRSTDASPDTRKVIFASSLGTVFEWYDFFLYGALAAVISKQFFAGVNDTT CCCCCCHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AFIFALMAFAAGFIVRPFGALVFGRLGDMIGRKYTFLATIILMGVATFAVGLLPTYASIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAAPIILVVLRMLQGLALGGEYGGAATYVAEHAPIGKRGFHTSWIQSTATLGLLLSLLVV HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LGCRYFTGDQFEVWGWRIPFLLSIVLLGISTWIRLSLHESPAYLKMKEEGKASKAPIRES HCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCCHHHH FGKWENLKVVLIALFSINAGQAVTFYAAQFYVLFFLTQFLKMDPAVANSLLIISVVIGAP CCCCCCCCEEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCH FFIIFGWLSDKVGRKPVLMLGLLLATALYFPIFKSLAHYANPAIDHASRQAPITVVADPA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECCC TCTFQFDPVGKAKFDSPCDKVKTFLVKQGLPYSSVAAPAGSTVQVSVGDVKLDGFDEAAL EEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCHHCCCCCCEEEEEECCEEECCCCHHHH RGAITLAGYPQQADLQQINKPMIVALIVGLIIISAMCYGPLAALMVELFPTRIRYTSMSL HCEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC PYHIGNGWFGGFLPTVSFALVVYTGDIFYGLWYPVLITGVSLVVGMICLRETKNIDLDKN CEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SEHVQPLDAVRSTDASPDTRKVIFASSLGTVFEWYDFFLYGALAAVISKQFFAGVNDTT CCCCCHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AFIFALMAFAAGFIVRPFGALVFGRLGDMIGRKYTFLATIILMGVATFAVGLLPTYASIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAAPIILVVLRMLQGLALGGEYGGAATYVAEHAPIGKRGFHTSWIQSTATLGLLLSLLVV HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LGCRYFTGDQFEVWGWRIPFLLSIVLLGISTWIRLSLHESPAYLKMKEEGKASKAPIRES HCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCCHHHH FGKWENLKVVLIALFSINAGQAVTFYAAQFYVLFFLTQFLKMDPAVANSLLIISVVIGAP CCCCCCCCEEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCH FFIIFGWLSDKVGRKPVLMLGLLLATALYFPIFKSLAHYANPAIDHASRQAPITVVADPA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECCC TCTFQFDPVGKAKFDSPCDKVKTFLVKQGLPYSSVAAPAGSTVQVSVGDVKLDGFDEAAL EEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCHHCCCCCCEEEEEECCEEECCCCHHHH RGAITLAGYPQQADLQQINKPMIVALIVGLIIISAMCYGPLAALMVELFPTRIRYTSMSL HCEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC PYHIGNGWFGGFLPTVSFALVVYTGDIFYGLWYPVLITGVSLVVGMICLRETKNIDLDKN CEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]