Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77458910

Identifier: 77458910

GI number: 77458910

Start: 3091193

End: 3092881

Strand: Direct

Name: 77458910

Synonym: Pfl01_2685

Alternate gene names: NA

Gene position: 3091193-3092881 (Clockwise)

Preceding gene: 77458909

Following gene: 77458911

Centisome position: 48.01

GC content: 63.23

Gene sequence:

>1689_bases
ATGGGACTGTTCGATTACAAAAATGCCGACGGCAAAGCGCTGTACAGCGATGCCATCGCCCTGACGCTGTATGCCTACAC
GCCGACCGGGCAGGCCTTGCCCGGCACTGGCTGGAAGCCGATCGGCGCCACGGCGCTGGGCTATCAGGGCAAGGTCGGGG
TGCAGGGCACGTTCTTCGGCGAGAAGGACGGCTTCACCAGCGCCGAAGCCGAAGTGCTCGGCAAGTACGACGCCGCGGGT
AAGCTGATCGGCATCGGCGTGGCCTTCCGCGGCACCGGCGGGCTGGGTTACAGCGACACCTTCGGCGACATGAAAAACAA
CCTGCTGGCTGCCATTGGCCCGTCGGACTACGCCACTCAGTACGCGAAAAACGCCTTCGACAACCTGCTCAAATCGGTGG
CCGCGTTCGCTGTCGCCCACGGCATTGCGGCCAAGGACGTACTTGTCAGCGGCCACAGCCTCGGCGGTCTCGGGGTCAAC
AGCGTGGCGGAGTTGAGCGCGAGCAACTGGGGCGGGTTTTTCAAGGACGCCAACTACATTTCGTTCGCCTCGCCGACCCA
GAGCAGCACCGGCACGAACGTGCTGAACATCGGCTACGAAAACGACCCGGTGTTCCGCGTGCTCGACGGCACCACGTTCA
GTACCGCGTCGATGGGCAAGCACGACAAACCGCACGATTCGACCACTGACAACATCGTCAACTTCAACGACAACTACGCG
TCCACCGCGCAGAATCTGGTGCCGTTCAGCATCGCCAACCCGCTGAACTGGTCGGCCCACAGCTCGCTGGGGTATGCCGA
CGGCCTGAATCGGGTGATCGCGTCGAAGTTCTACGGCCTGACGCACAAGGACTCGACGATCATCGTCTCCAACCTTGAGG
ACGCGTCGCGGGGCAAGACCTGGGTCGAGGATCTGGGCCGCAGCGGCGAGCCGCACACCGGCAGCACGTTCATCATCGGC
ACCGACAGCGGCGACTGGCTCAAGGGCGGGGCGGGCAACGACTTCCTCGAAGGCCTGGGCGGCGATGACCGTTTCCGTGA
TGACGGCGGTTTCAACATCCTGCTCGGTGGCCAGGGCCACAATACCTTCGAGCTGCAAAAGCCGTTGCAGAACTTCAGCT
TCGCCAACGACGGCGACGGCACGCTGTACGTGCGTGACGCCTACGGCGGCATCAGCATGACCCGCGACATCGGCGCGCTA
GTGAGCAAGGAGTCGGGTTCGTGGTGGGGCAGCAAGGAAATCACCTGGACCGTCACCGCCAAAGGCCTGGCCAACGGTGC
CGAACTGACCCAGTACAACCATTCGCTCAGCGGCGGCGCCATGGGCGACACCCTCAAAGCCACCGCCGACGGCGACTGGC
TGTTCGGCCTGGGCGGTAACGATCACCTGCAAAGCGACAAGGCCCACGTGACCTTCGTCGGCGGTGCCGGCAATGACGTG
ATGAGCGCGGTGGGTGGCAACAACACCTTCCTGTTCAGCGGCGCCTTCGGTTTTGACGCGATCAATGGCTACCAGGGCAG
CGACAAACTGGTGTTCATGGGCGTCGAAGGCGCGGGGCAGGGCTACGACTACAAGCAACACGCGTCGCAGTCCGGAAGCG
ATACCGTGCTGAAGATTGGCGACTTTGCCGTGACGCTGATCGGGGTCGGTGTGGCTAACCTGTCGGATTCGAGTTTCGTC
TTCGCCTGA

Upstream 100 bases:

>100_bases
AAAGGACCACGGTGTGGGCTTGACGCTGGACTGGCAGTTCTAAGGGGTAACGGCAGTTCTTTCGAGAACTGCCGTTTTTA
AAAGGAAGAGAGAGCACAAC

Downstream 100 bases:

>100_bases
CAAACGAAAGTTGTACTGAAATGCTCCGGGGCGCCTCGGGAGGGGCGTTCTGGTTGTGAGCTATCTCTGAACAATTCCAA
CAAAAAGAGAGGCAACAGCA

Product: triacylglycerol lipase

Products: NA

Alternate protein names: Triacylglycerol lipase [H]

Number of amino acids: Translated: 562; Mature: 561

Protein sequence:

>562_residues
MGLFDYKNADGKALYSDAIALTLYAYTPTGQALPGTGWKPIGATALGYQGKVGVQGTFFGEKDGFTSAEAEVLGKYDAAG
KLIGIGVAFRGTGGLGYSDTFGDMKNNLLAAIGPSDYATQYAKNAFDNLLKSVAAFAVAHGIAAKDVLVSGHSLGGLGVN
SVAELSASNWGGFFKDANYISFASPTQSSTGTNVLNIGYENDPVFRVLDGTTFSTASMGKHDKPHDSTTDNIVNFNDNYA
STAQNLVPFSIANPLNWSAHSSLGYADGLNRVIASKFYGLTHKDSTIIVSNLEDASRGKTWVEDLGRSGEPHTGSTFIIG
TDSGDWLKGGAGNDFLEGLGGDDRFRDDGGFNILLGGQGHNTFELQKPLQNFSFANDGDGTLYVRDAYGGISMTRDIGAL
VSKESGSWWGSKEITWTVTAKGLANGAELTQYNHSLSGGAMGDTLKATADGDWLFGLGGNDHLQSDKAHVTFVGGAGNDV
MSAVGGNNTFLFSGAFGFDAINGYQGSDKLVFMGVEGAGQGYDYKQHASQSGSDTVLKIGDFAVTLIGVGVANLSDSSFV
FA

Sequences:

>Translated_562_residues
MGLFDYKNADGKALYSDAIALTLYAYTPTGQALPGTGWKPIGATALGYQGKVGVQGTFFGEKDGFTSAEAEVLGKYDAAG
KLIGIGVAFRGTGGLGYSDTFGDMKNNLLAAIGPSDYATQYAKNAFDNLLKSVAAFAVAHGIAAKDVLVSGHSLGGLGVN
SVAELSASNWGGFFKDANYISFASPTQSSTGTNVLNIGYENDPVFRVLDGTTFSTASMGKHDKPHDSTTDNIVNFNDNYA
STAQNLVPFSIANPLNWSAHSSLGYADGLNRVIASKFYGLTHKDSTIIVSNLEDASRGKTWVEDLGRSGEPHTGSTFIIG
TDSGDWLKGGAGNDFLEGLGGDDRFRDDGGFNILLGGQGHNTFELQKPLQNFSFANDGDGTLYVRDAYGGISMTRDIGAL
VSKESGSWWGSKEITWTVTAKGLANGAELTQYNHSLSGGAMGDTLKATADGDWLFGLGGNDHLQSDKAHVTFVGGAGNDV
MSAVGGNNTFLFSGAFGFDAINGYQGSDKLVFMGVEGAGQGYDYKQHASQSGSDTVLKIGDFAVTLIGVGVANLSDSSFV
FA
>Mature_561_residues
GLFDYKNADGKALYSDAIALTLYAYTPTGQALPGTGWKPIGATALGYQGKVGVQGTFFGEKDGFTSAEAEVLGKYDAAGK
LIGIGVAFRGTGGLGYSDTFGDMKNNLLAAIGPSDYATQYAKNAFDNLLKSVAAFAVAHGIAAKDVLVSGHSLGGLGVNS
VAELSASNWGGFFKDANYISFASPTQSSTGTNVLNIGYENDPVFRVLDGTTFSTASMGKHDKPHDSTTDNIVNFNDNYAS
TAQNLVPFSIANPLNWSAHSSLGYADGLNRVIASKFYGLTHKDSTIIVSNLEDASRGKTWVEDLGRSGEPHTGSTFIIGT
DSGDWLKGGAGNDFLEGLGGDDRFRDDGGFNILLGGQGHNTFELQKPLQNFSFANDGDGTLYVRDAYGGISMTRDIGALV
SKESGSWWGSKEITWTVTAKGLANGAELTQYNHSLSGGAMGDTLKATADGDWLFGLGGNDHLQSDKAHVTFVGGAGNDVM
SAVGGNNTFLFSGAFGFDAINGYQGSDKLVFMGVEGAGQGYDYKQHASQSGSDTVLKIGDFAVTLIGVGVANLSDSSFVF
A

Specific function: Unknown

COG id: COG2931

COG function: function code Q; RTX toxins and related Ca2+-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 hemolysin-type calcium-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018511
- InterPro:   IPR001343
- InterPro:   IPR002921
- InterPro:   IPR011049 [H]

Pfam domain/function: PF00353 HemolysinCabind; PF01764 Lipase_3 [H]

EC number: =3.1.1.3 [H]

Molecular weight: Translated: 58674; Mature: 58543

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFDYKNADGKALYSDAIALTLYAYTPTGQALPGTGWKPIGATALGYQGKVGVQGTFFG
CCCCCCCCCCCCEEECCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECC
EKDGFTSAEAEVLGKYDAAGKLIGIGVAFRGTGGLGYSDTFGDMKNNLLAAIGPSDYATQ
CCCCCCCHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHCCEEEEECCCHHHHH
YAKNAFDNLLKSVAAFAVAHGIAAKDVLVSGHSLGGLGVNSVAELSASNWGGFFKDANYI
HHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCEE
SFASPTQSSTGTNVLNIGYENDPVFRVLDGTTFSTASMGKHDKPHDSTTDNIVNFNDNYA
EECCCCCCCCCCEEEEECCCCCCEEEEECCCEECCCCCCCCCCCCCCCCCCEEECCCCHH
STAQNLVPFSIANPLNWSAHSSLGYADGLNRVIASKFYGLTHKDSTIIVSNLEDASRGKT
HHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCH
WVEDLGRSGEPHTGSTFIIGTDSGDWLKGGAGNDFLEGLGGDDRFRDDGGFNILLGGQGH
HHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCC
NTFELQKPLQNFSFANDGDGTLYVRDAYGGISMTRDIGALVSKESGSWWGSKEITWTVTA
CEEHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEE
KGLANGAELTQYNHSLSGGAMGDTLKATADGDWLFGLGGNDHLQSDKAHVTFVGGAGNDV
CCCCCCCHHHHCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCEEEEECCCCCHH
MSAVGGNNTFLFSGAFGFDAINGYQGSDKLVFMGVEGAGQGYDYKQHASQSGSDTVLKIG
HHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCEEEEC
DFAVTLIGVGVANLSDSSFVFA
CEEEEEEEEEEECCCCCCEEEC
>Mature Secondary Structure 
GLFDYKNADGKALYSDAIALTLYAYTPTGQALPGTGWKPIGATALGYQGKVGVQGTFFG
CCCCCCCCCCCEEECCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECC
EKDGFTSAEAEVLGKYDAAGKLIGIGVAFRGTGGLGYSDTFGDMKNNLLAAIGPSDYATQ
CCCCCCCHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHCCEEEEECCCHHHHH
YAKNAFDNLLKSVAAFAVAHGIAAKDVLVSGHSLGGLGVNSVAELSASNWGGFFKDANYI
HHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCEE
SFASPTQSSTGTNVLNIGYENDPVFRVLDGTTFSTASMGKHDKPHDSTTDNIVNFNDNYA
EECCCCCCCCCCEEEEECCCCCCEEEEECCCEECCCCCCCCCCCCCCCCCCEEECCCCHH
STAQNLVPFSIANPLNWSAHSSLGYADGLNRVIASKFYGLTHKDSTIIVSNLEDASRGKT
HHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCH
WVEDLGRSGEPHTGSTFIIGTDSGDWLKGGAGNDFLEGLGGDDRFRDDGGFNILLGGQGH
HHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCC
NTFELQKPLQNFSFANDGDGTLYVRDAYGGISMTRDIGALVSKESGSWWGSKEITWTVTA
CEEHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEE
KGLANGAELTQYNHSLSGGAMGDTLKATADGDWLFGLGGNDHLQSDKAHVTFVGGAGNDV
CCCCCCCHHHHCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCEEEEECCCCCHH
MSAVGGNNTFLFSGAFGFDAINGYQGSDKLVFMGVEGAGQGYDYKQHASQSGSDTVLKIG
HHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCEEEEC
DFAVTLIGVGVANLSDSSFVFA
CEEEEEEEEEEECCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1599260 [H]