Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77458887
Identifier: 77458887
GI number: 77458887
Start: 3056643
End: 3057518
Strand: Direct
Name: 77458887
Synonym: Pfl01_2662
Alternate gene names: NA
Gene position: 3056643-3057518 (Clockwise)
Preceding gene: 77458886
Following gene: 77458888
Centisome position: 47.48
GC content: 55.71
Gene sequence:
>876_bases ATGAGTAAGGCTCAAGATTTCTCCAGGCTATATGCCCGCGTAGCCAGCGACATTGCCACCGCGCTGGATGATGTCTCCAG GCTTGATGTGAGTAATGACAAGGGCAATCTCCACCTCGCCAGCGTCAAGGAAAAGCTCGGCGAAATGAAGTCGCGTTTTG ATGGCGAGATTTCCTATCTGGAAAAGCACGCCGAGTGGGATAACTTCACCATTGCCTTTTTTGGCGAAACCAACGCTGGC AAGAGCACCATCATCGAGAGTCTGCGCATCCTCTTCGAAGAGAAGAAACGCCAAGCCCTGATTCAGCGCAACCAGGCGAC CGCGGCTGATATTCAAGCGGTGTTCTCGCACAAAAGCGATGAGCTCATCGAAGAGCTCAGTACTCGTTATGTGAGCTTCT GTGAAGATATAGCTGCACTGGGCGACGACATCGGTGCGCTGGTCAATCAGACCCAGCGCGATCTGCAGACGACCCGCCAG CAGCTCGAACATACTCGGCAGGATTACGCGTACTGCAAAGAGCGCCTGAGCCTTGCCGTCAGCGATCTCGACAGCACTCG TCAGGCATTGCAAGCCACCGAAACACGTCTGGCTGACAGCCAGAAAAACCACACGCAAACCCAGAGCGAGCTGCAGCAGA CAGGCTTACAGCTTCAGGGCGTGCGTGGCGACCTTCAGCGCCTTGAGCAACAGTTGGTGGAGAAGGGCAGTCAGTTGCAG GCCACCCAGGCGCAATTGAGCGAGTGCCAACGTCAGAGTGAGTCTGCCCGTATTTCGCTGGAGCAGCGGGCCAGGATGAA GCTGGTATTCGGATTAGTGGGAGGGATTGTGTTGGGAGCCATTGCAGGTGCCCTGGGTTATGCGCAATTGCTGTGA
Upstream 100 bases:
>100_bases AACCAAGACGTCTATGCGACAGAAGTGAACTTGACAGTCGTGATGGCAAAATGCAATTTGTGGGCTGAATTGGATCCAGC CGAAAACAACAGGGAACGAT
Downstream 100 bases:
>100_bases GCCATTGCATTGATGCCCTTGCAATGACCTTCTCTTCGTAGAATCCGGACCTACTCATGCACGAACAACACTCTTTGAGC GAGCTGGTTAGCGACAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MSKAQDFSRLYARVASDIATALDDVSRLDVSNDKGNLHLASVKEKLGEMKSRFDGEISYLEKHAEWDNFTIAFFGETNAG KSTIIESLRILFEEKKRQALIQRNQATAADIQAVFSHKSDELIEELSTRYVSFCEDIAALGDDIGALVNQTQRDLQTTRQ QLEHTRQDYAYCKERLSLAVSDLDSTRQALQATETRLADSQKNHTQTQSELQQTGLQLQGVRGDLQRLEQQLVEKGSQLQ ATQAQLSECQRQSESARISLEQRARMKLVFGLVGGIVLGAIAGALGYAQLL
Sequences:
>Translated_291_residues MSKAQDFSRLYARVASDIATALDDVSRLDVSNDKGNLHLASVKEKLGEMKSRFDGEISYLEKHAEWDNFTIAFFGETNAG KSTIIESLRILFEEKKRQALIQRNQATAADIQAVFSHKSDELIEELSTRYVSFCEDIAALGDDIGALVNQTQRDLQTTRQ QLEHTRQDYAYCKERLSLAVSDLDSTRQALQATETRLADSQKNHTQTQSELQQTGLQLQGVRGDLQRLEQQLVEKGSQLQ ATQAQLSECQRQSESARISLEQRARMKLVFGLVGGIVLGAIAGALGYAQLL >Mature_290_residues SKAQDFSRLYARVASDIATALDDVSRLDVSNDKGNLHLASVKEKLGEMKSRFDGEISYLEKHAEWDNFTIAFFGETNAGK STIIESLRILFEEKKRQALIQRNQATAADIQAVFSHKSDELIEELSTRYVSFCEDIAALGDDIGALVNQTQRDLQTTRQQ LEHTRQDYAYCKERLSLAVSDLDSTRQALQATETRLADSQKNHTQTQSELQQTGLQLQGVRGDLQRLEQQLVEKGSQLQA TQAQLSECQRQSESARISLEQRARMKLVFGLVGGIVLGAIAGALGYAQLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32471; Mature: 32340
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKAQDFSRLYARVASDIATALDDVSRLDVSNDKGNLHLASVKEKLGEMKSRFDGEISYL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH EKHAEWDNFTIAFFGETNAGKSTIIESLRILFEEKKRQALIQRNQATAADIQAVFSHKSD HHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHH ELIEELSTRYVSFCEDIAALGDDIGALVNQTQRDLQTTRQQLEHTRQDYAYCKERLSLAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDLDSTRQALQATETRLADSQKNHTQTQSELQQTGLQLQGVRGDLQRLEQQLVEKGSQLQ HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCCCHHH ATQAQLSECQRQSESARISLEQRARMKLVFGLVGGIVLGAIAGALGYAQLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKAQDFSRLYARVASDIATALDDVSRLDVSNDKGNLHLASVKEKLGEMKSRFDGEISYL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH EKHAEWDNFTIAFFGETNAGKSTIIESLRILFEEKKRQALIQRNQATAADIQAVFSHKSD HHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHH ELIEELSTRYVSFCEDIAALGDDIGALVNQTQRDLQTTRQQLEHTRQDYAYCKERLSLAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDLDSTRQALQATETRLADSQKNHTQTQSELQQTGLQLQGVRGDLQRLEQQLVEKGSQLQ HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCCCHHH ATQAQLSECQRQSESARISLEQRARMKLVFGLVGGIVLGAIAGALGYAQLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA