Click here to switch to the map view.

The map label for this gene is 77458886

Identifier: 77458886

GI number: 77458886

Start: 3055239

End: 3056528

Strand: Direct

Name: 77458886

Synonym: Pfl01_2661

Alternate gene names: NA

Gene position: 3055239-3056528 (Clockwise)

Preceding gene: 77458885

Following gene: 77458887

Centisome position: 47.45

GC content: 54.03

Gene sequence:

>1290_bases
ATGACGGCGATACAGATTTTCGAGTTCGATACGCTGGTCGCCTCGGATGAAGACTCCAATGGCACGACTGTTCCCCTTAA
GGTCTTCGCTTGGCTGGAAGAGCAGTGCCTGACCCCTGACGAACGCGCTCCGGTCTGGTTGAAACTAACCAGTCGGCAGG
GCCGGCGCGCCATTCGGTTCAGCAATTACGTTGGCGTGCTGCGTGCTCCCTGCGGTTATCAAATCGAGATCCTGCCCAAG
ATCGGTCGCGATATGTGTGCGGACAGATCACGCAGATTGCTGATCGATATGCTCAAGTGCCTGCGCGGCTTTCGCCATAT
CAAAACGTCGAACGCTGATCTGAAAATGAAACACATGCCGCTGCTCGAGGTGTTCCTACGCCAATTTCTTGAGGCCGTGC
GACATGTCGTGAATCGGGGATTGCGCAGCGACTACAGCGCTCGGCAGGCTAACCTTTCCAGCCTGCGCGGCAAGCTGTTA
ATGGCCCCTCACCTGGCGCAGAATCTGCTGCGCCGTGACCGGTTCTTTACCGAATTCGACGAGTTCATCCAGGATCGAGC
AGAAAACAGGCTTATTCATAGCGCCCTGCGCAAAACGCTGAATATGTGCAAAACGCCCGATAATCAGCGGTTGGCGCGAG
AGTTGAGTTTTGTTTTTGCCGAAGTGCCCCTGTGTAGCGACATCAGCCAAGACCTCAAGCTCATACGGCTTGACCGAGGC
ATGGCTTATTACGAGCCTGCGCTTGATTGGGCGCGATTCATCCTGCAGGGCGACAGTCCGGTAGCAGGCGCAGGCAAACA
CGACGCGCCTTCATTGCTGTTTCCCATGGAGGCATTGTTCGAAGCCTACGTGGCGAAACATCTTAAAGCTCAAGTTCAGC
AAGGTTTCACTCTGCGGACCCAGACCAGCAAGCACCATCTCGTGAGCCATCGGCAACAGGACTGGTTTCGCCTCAAGCCG
GATCTGCTGATCGAGCAGGGCGCTGAGCCCCATATGGTGCTTGATACCAAGTGGAAGCTTCTGGACAGCATTAAAGGCAA
CAGTCGTGAGAAATACCTGCTCAGCCAGGCCGACTTTTACCAGTTGCATGCGTATGCACATGTCTACCTGAAAGACGCCG
GCAATGTTGTGTTGATCTACCCATGGACAGATTCATTTGCGGAACCGTTGCCGGTATTTCACTTCAGCAGCTCGAATGAC
TTAAAACTCTGGGTTCTACCTTTTTGTATCGAGAACCGCAGGTTGTTGCTGCCAGAGCAGTCTGTCCTTGATAAATACCT
TTCTCGCTGA

Upstream 100 bases:

>100_bases
ATGATCTGGATGAATACTCGTTGCGGCCTCAATACCGCTTGAATAAGGAGGTGTTTGGTAGCCCGCCAGCCTATGTCGGT
GTCTATGCGACGTTTGCTGA

Downstream 100 bases:

>100_bases
GAGCAAAACGCCGGAACCAAGACGTCTATGCGACAGAAGTGAACTTGACAGTCGTGATGGCAAAATGCAATTTGTGGGCT
GAATTGGATCCAGCCGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: 5-Methylcytosine Restriction System Component-Like Protein; 5-Methylcytosine Restriction System Component; McrBC 5-Methylcytosine Restriction System Component-Like; McrBC Catalytic Subunit McrC; McrBC Restriction Endonuclease System Subunit McrC; 5-Methylcytosine Restriction System Catalytic Subunit; 5-Methylcytosine-Specific Restriction Protein C; McrBC 5-Methylcytosine Restriction Subunit McrC; 5-Methylcytosine Restriction System Component- Like Protein

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MTAIQIFEFDTLVASDEDSNGTTVPLKVFAWLEEQCLTPDERAPVWLKLTSRQGRRAIRFSNYVGVLRAPCGYQIEILPK
IGRDMCADRSRRLLIDMLKCLRGFRHIKTSNADLKMKHMPLLEVFLRQFLEAVRHVVNRGLRSDYSARQANLSSLRGKLL
MAPHLAQNLLRRDRFFTEFDEFIQDRAENRLIHSALRKTLNMCKTPDNQRLARELSFVFAEVPLCSDISQDLKLIRLDRG
MAYYEPALDWARFILQGDSPVAGAGKHDAPSLLFPMEALFEAYVAKHLKAQVQQGFTLRTQTSKHHLVSHRQQDWFRLKP
DLLIEQGAEPHMVLDTKWKLLDSIKGNSREKYLLSQADFYQLHAYAHVYLKDAGNVVLIYPWTDSFAEPLPVFHFSSSND
LKLWVLPFCIENRRLLLPEQSVLDKYLSR

Sequences:

>Translated_429_residues
MTAIQIFEFDTLVASDEDSNGTTVPLKVFAWLEEQCLTPDERAPVWLKLTSRQGRRAIRFSNYVGVLRAPCGYQIEILPK
IGRDMCADRSRRLLIDMLKCLRGFRHIKTSNADLKMKHMPLLEVFLRQFLEAVRHVVNRGLRSDYSARQANLSSLRGKLL
MAPHLAQNLLRRDRFFTEFDEFIQDRAENRLIHSALRKTLNMCKTPDNQRLARELSFVFAEVPLCSDISQDLKLIRLDRG
MAYYEPALDWARFILQGDSPVAGAGKHDAPSLLFPMEALFEAYVAKHLKAQVQQGFTLRTQTSKHHLVSHRQQDWFRLKP
DLLIEQGAEPHMVLDTKWKLLDSIKGNSREKYLLSQADFYQLHAYAHVYLKDAGNVVLIYPWTDSFAEPLPVFHFSSSND
LKLWVLPFCIENRRLLLPEQSVLDKYLSR
>Mature_428_residues
TAIQIFEFDTLVASDEDSNGTTVPLKVFAWLEEQCLTPDERAPVWLKLTSRQGRRAIRFSNYVGVLRAPCGYQIEILPKI
GRDMCADRSRRLLIDMLKCLRGFRHIKTSNADLKMKHMPLLEVFLRQFLEAVRHVVNRGLRSDYSARQANLSSLRGKLLM
APHLAQNLLRRDRFFTEFDEFIQDRAENRLIHSALRKTLNMCKTPDNQRLARELSFVFAEVPLCSDISQDLKLIRLDRGM
AYYEPALDWARFILQGDSPVAGAGKHDAPSLLFPMEALFEAYVAKHLKAQVQQGFTLRTQTSKHHLVSHRQQDWFRLKPD
LLIEQGAEPHMVLDTKWKLLDSIKGNSREKYLLSQADFYQLHAYAHVYLKDAGNVVLIYPWTDSFAEPLPVFHFSSSNDL
KLWVLPFCIENRRLLLPEQSVLDKYLSR

Specific function: Unknown

COG id: COG4268

COG function: function code V; McrBC 5-methylcytosine restriction system component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49715; Mature: 49584

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAIQIFEFDTLVASDEDSNGTTVPLKVFAWLEEQCLTPDERAPVWLKLTSRQGRRAIRF
CCEEEEEEEEEEEECCCCCCCCEEHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEH
SNYVGVLRAPCGYQIEILPKIGRDMCADRSRRLLIDMLKCLRGFRHIKTSNADLKMKHMP
HCCHHHHCCCCCCEEEEHHHHCHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
LLEVFLRQFLEAVRHVVNRGLRSDYSARQANLSSLRGKLLMAPHLAQNLLRRDRFFTEFD
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHH
EFIQDRAENRLIHSALRKTLNMCKTPDNQRLARELSFVFAEVPLCSDISQDLKLIRLDRG
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHEEHHCCC
MAYYEPALDWARFILQGDSPVAGAGKHDAPSLLFPMEALFEAYVAKHLKAQVQQGFTLRT
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
QTSKHHLVSHRQQDWFRLKPDLLIEQGAEPHMVLDTKWKLLDSIKGNSREKYLLSQADFY
CCCHHHHHHHCCCHHHCCCCHHHHHCCCCCCEEECCHHHHHHHHCCCCCHHHHHCCCCHH
QLHAYAHVYLKDAGNVVLIYPWTDSFAEPLPVFHFSSSNDLKLWVLPFCIENRRLLLPEQ
HHHHEEEEEEECCCCEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEEECCCEEECCCH
SVLDKYLSR
HHHHHHHCC
>Mature Secondary Structure 
TAIQIFEFDTLVASDEDSNGTTVPLKVFAWLEEQCLTPDERAPVWLKLTSRQGRRAIRF
CEEEEEEEEEEEECCCCCCCCEEHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEH
SNYVGVLRAPCGYQIEILPKIGRDMCADRSRRLLIDMLKCLRGFRHIKTSNADLKMKHMP
HCCHHHHCCCCCCEEEEHHHHCHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
LLEVFLRQFLEAVRHVVNRGLRSDYSARQANLSSLRGKLLMAPHLAQNLLRRDRFFTEFD
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHH
EFIQDRAENRLIHSALRKTLNMCKTPDNQRLARELSFVFAEVPLCSDISQDLKLIRLDRG
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHEEHHCCC
MAYYEPALDWARFILQGDSPVAGAGKHDAPSLLFPMEALFEAYVAKHLKAQVQQGFTLRT
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
QTSKHHLVSHRQQDWFRLKPDLLIEQGAEPHMVLDTKWKLLDSIKGNSREKYLLSQADFY
CCCHHHHHHHCCCHHHCCCCHHHHHCCCCCCEEECCHHHHHHHHCCCCCHHHHHCCCCHH
QLHAYAHVYLKDAGNVVLIYPWTDSFAEPLPVFHFSSSNDLKLWVLPFCIENRRLLLPEQ
HHHHEEEEEEECCCCEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEEECCCEEECCCH
SVLDKYLSR
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA