| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458725
Identifier: 77458725
GI number: 77458725
Start: 2859040
End: 2859744
Strand: Direct
Name: 77458725
Synonym: Pfl01_2500
Alternate gene names: NA
Gene position: 2859040-2859744 (Clockwise)
Preceding gene: 77458724
Following gene: 77458726
Centisome position: 44.41
GC content: 66.1
Gene sequence:
>705_bases ATGACTGCACAACTGCCAATCGAGCCTTTGCCGGTGAAGAAGTCGCCACTGCGTTACGTGAAGTGGGGCGCCGGGCTGCT GCTGGGTGCCGTCGCGGCATTCCTGTTGTGGCAGTGGGCCAACGACATGAGCGGCATCCGCCGGGAAGCGCCGAAGGTGC CGACGATCATTCCGTTGCCGCCACCGCCACCTCCGCCGCCGGAAAAACCGCCGGAGCCGGAAACCCCGGTGGAAGAAAAA ATCGTCGAGCCCGAGCCGACGCCCGAGCCGCAGGAAGTGAAACCCGAGGAAGAGGCGCCGCCATCGCCGGCGGACGATCT GGCCAACCCGATGCAAATCGACGGCGACGCCCAGAGCGGCAGCGACGCGTTCAACATCGGCGCGGGCAAGGGCGGCGGCA TGGCCGGATCCGGCGGTGGGCGACTGGGCAACGGCACCTATAGCCAGTTCCTCGCGTTCACTTTCCAGAAGCTGCTGCGC GAGAACCCCGATCTGCGCAACCTCGCGTTTTCGCTGCAGGCCGATGTGTGGCTGAGCAGCGTCGGCGAGATCACCCGGGT CGAGCTGATCAAGTCCAGCGGCAACCCCGAAATCGATACGCAAGTGCTCGCCGCGCTGCGCAATGCGCCGGCGTTAAGCG AACGGCCACCGGCCTCCATCACCTTGCCTGTGCGCATGTCCCTGCAAGGGCGGCGTCCGGGTTAA
Upstream 100 bases:
>100_bases GGTGCAGTACCAGAAAGTCATCGAAGTGCTGGATCTGCTGCGCCGGCTCGAACTGTCCCAGGTCGGTCTCGTTACCGGCA AACCGACGCAGGGCTGAGTG
Downstream 100 bases:
>100_bases CCGAATTCATAAAGCTGTATGAAAAGGAGTTGTGTGCAGATGATTTCCAACGTGAATCGATTGTCCCTGGCGGTCGGCAT GGTCATCGCGACCCTGGTCG
Product: TonB-like protein
Products: NA
Alternate protein names: Proline-Rich Protein; NB-Like Protein; NB Family Protein
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTAQLPIEPLPVKKSPLRYVKWGAGLLLGAVAAFLLWQWANDMSGIRREAPKVPTIIPLPPPPPPPPEKPPEPETPVEEK IVEPEPTPEPQEVKPEEEAPPSPADDLANPMQIDGDAQSGSDAFNIGAGKGGGMAGSGGGRLGNGTYSQFLAFTFQKLLR ENPDLRNLAFSLQADVWLSSVGEITRVELIKSSGNPEIDTQVLAALRNAPALSERPPASITLPVRMSLQGRRPG
Sequences:
>Translated_234_residues MTAQLPIEPLPVKKSPLRYVKWGAGLLLGAVAAFLLWQWANDMSGIRREAPKVPTIIPLPPPPPPPPEKPPEPETPVEEK IVEPEPTPEPQEVKPEEEAPPSPADDLANPMQIDGDAQSGSDAFNIGAGKGGGMAGSGGGRLGNGTYSQFLAFTFQKLLR ENPDLRNLAFSLQADVWLSSVGEITRVELIKSSGNPEIDTQVLAALRNAPALSERPPASITLPVRMSLQGRRPG >Mature_233_residues TAQLPIEPLPVKKSPLRYVKWGAGLLLGAVAAFLLWQWANDMSGIRREAPKVPTIIPLPPPPPPPPEKPPEPETPVEEKI VEPEPTPEPQEVKPEEEAPPSPADDLANPMQIDGDAQSGSDAFNIGAGKGGGMAGSGGGRLGNGTYSQFLAFTFQKLLRE NPDLRNLAFSLQADVWLSSVGEITRVELIKSSGNPEIDTQVLAALRNAPALSERPPASITLPVRMSLQGRRPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24995; Mature: 24864
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQLPIEPLPVKKSPLRYVKWGAGLLLGAVAAFLLWQWANDMSGIRREAPKVPTIIPLP CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC PPPPPPPEKPPEPETPVEEKIVEPEPTPEPQEVKPEEEAPPSPADDLANPMQIDGDAQSG CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEECCCCCCC SDAFNIGAGKGGGMAGSGGGRLGNGTYSQFLAFTFQKLLRENPDLRNLAFSLQADVWLSS CCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VGEITRVELIKSSGNPEIDTQVLAALRNAPALSERPPASITLPVRMSLQGRRPG HCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCC >Mature Secondary Structure TAQLPIEPLPVKKSPLRYVKWGAGLLLGAVAAFLLWQWANDMSGIRREAPKVPTIIPLP CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC PPPPPPPEKPPEPETPVEEKIVEPEPTPEPQEVKPEEEAPPSPADDLANPMQIDGDAQSG CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEECCCCCCC SDAFNIGAGKGGGMAGSGGGRLGNGTYSQFLAFTFQKLLRENPDLRNLAFSLQADVWLSS CCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VGEITRVELIKSSGNPEIDTQVLAALRNAPALSERPPASITLPVRMSLQGRRPG HCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA