| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458726
Identifier: 77458726
GI number: 77458726
Start: 2859784
End: 2861481
Strand: Direct
Name: 77458726
Synonym: Pfl01_2501
Alternate gene names: NA
Gene position: 2859784-2861481 (Clockwise)
Preceding gene: 77458725
Following gene: 77458727
Centisome position: 44.42
GC content: 63.02
Gene sequence:
>1698_bases ATGATTTCCAACGTGAATCGATTGTCCCTGGCGGTCGGCATGGTCATCGCGACCCTGGTCGGTCAGGCCGCGGCAGCGCC TGCGCCCTCGGAGAACGCCACGATCAATCTGATCCGCTTGCTGGTCGAGCAGGGCATTCTGAAACAGGACAAGGCCGACG CACTGATCGCCCAGGCCCAGAACGAAGCGGCCCAGGCCAAGCAGGCTGCGGCGTCCACCGCTGTGGCCGCCGGGCCGGTC GCCGCACCGGGCGATGTGCGGGTGCAATACGTGCCGGCGGCGGTGCGCGACCAGATCCGCGATCAGGTCAAGGCTGAAGT CATGGCCACCGCCAAGCAGGAAAACTGGGCCGCGCCCAACACCTTCCCGGACTGGGCGTCGCGCATCAGCTTCGACGGCG ACATCCGTCTGCGTGACGAATCACGCTACTACTCGGGCAGCAACAGCAACGAAATCGTCGACTTCGCCAAACTCAACAAC AACGGCCCGTACGACGTGAACCCCAACAGCAGCACCGCGTTGCCGCCGTTGCTCAACACCCGCGAAGACCGCGAAAACCT GTTCCGCCTGCGCGCCCGCCTGGGCATGAAAGCGGAGATTTCGCCGCAATGGACCGCCGGCATCCGCATCGGCACCGGCT CGGACAACAACCCGGTGTCGACCACCCAGAACCTCGGCGGCGGTTTCTCGAAAAAGGACATCTGGCTCGATCAGGGTTAC CTGACCTGGAAGCCGTCGGAGGAGCTGACGCTGACCGGTGGCCGCTTCGCCAACCCGTTCATGTCCACCGACATGCTGTA TTCCAACGACCTGAACTTCGACGGCGTGGCGGCGATTTTCGACCACAAGCTCAGCCGCGACTGGGGCGTGTTCGGCACTG TCGGCGCGTTCCCGGTGGACTACACCAACGACACCACCACCAGCAACGGCTTCGACAAGGAAGAAAGCGACAACAAATGG CTGTACGGCGCGCAGATCGGCGCCAAATGGGCGATCAACAGCAACAACCGCTTGAAAGGCGCGCTGGCCTACTACCGCTT CGACGACATCGAAGGCCAGCGCTCCAGCCCTTGCGAACCGTGGGCCGGCGCGCCGGGCTGCGACAGCGACGGCACCCGCG CAGCATTCATGCAGAAGGGCAACAGCGTGTTCCTGCTGCGTGACATCACGCCGAACCCGCTCAACCCGACCACCACGCCG CAACCGCAATTCGTTGGCCTGGCGTCCGAATTCAACCTGTTGGACCTCAACGTGGTGTGGGACGCCGACCTGCCGGAAGA CTTCAAACTGCGCAGCCAGGGCAACTACATCCACAACCTCGGTTACGACGAAGGCGACATGCGCAAGCGTTCGGCCGGAC AACTGGTCAACAACCTCGACAGCAACGGCAACATCGAAAGCGGCGCCAATGCGTGGATGGTCCAGTTCACCCTCGGCAAC GCGCTGGAGCTGAAGAAGCAGGGCGACTGGAACCTGTTCGCCGGCTACAAGTACATCCAGCCGGATGCCTTGCCGGACGG CTTCAACGATTCGTCGTTCCACCTCGGCGGCACCAACGCCAAGGGTTACTTTCTGGGGGGCAATTACGGTCTTGCGAAGA ACGTCTACGCCACCGGCCGCTGGCTGAGTTCGGAGGCGGTGTATGGCGCGCCGTTCGACATCGACGTCATGCAGCTTGAG ATCAACACGCGCTTCTAA
Upstream 100 bases:
>100_bases GCCACCGGCCTCCATCACCTTGCCTGTGCGCATGTCCCTGCAAGGGCGGCGTCCGGGTTAACCGAATTCATAAAGCTGTA TGAAAAGGAGTTGTGTGCAG
Downstream 100 bases:
>100_bases GGCGCCGGGAGAGGGTTATGAAAATCCGCTGTTTATGGCTTGGGCTCGGCATGTTGATCGCCACCGGGGCGAGCGCCGAA GGCATGGAGGAACGCCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 565; Mature: 565
Protein sequence:
>565_residues MISNVNRLSLAVGMVIATLVGQAAAAPAPSENATINLIRLLVEQGILKQDKADALIAQAQNEAAQAKQAAASTAVAAGPV AAPGDVRVQYVPAAVRDQIRDQVKAEVMATAKQENWAAPNTFPDWASRISFDGDIRLRDESRYYSGSNSNEIVDFAKLNN NGPYDVNPNSSTALPPLLNTREDRENLFRLRARLGMKAEISPQWTAGIRIGTGSDNNPVSTTQNLGGGFSKKDIWLDQGY LTWKPSEELTLTGGRFANPFMSTDMLYSNDLNFDGVAAIFDHKLSRDWGVFGTVGAFPVDYTNDTTTSNGFDKEESDNKW LYGAQIGAKWAINSNNRLKGALAYYRFDDIEGQRSSPCEPWAGAPGCDSDGTRAAFMQKGNSVFLLRDITPNPLNPTTTP QPQFVGLASEFNLLDLNVVWDADLPEDFKLRSQGNYIHNLGYDEGDMRKRSAGQLVNNLDSNGNIESGANAWMVQFTLGN ALELKKQGDWNLFAGYKYIQPDALPDGFNDSSFHLGGTNAKGYFLGGNYGLAKNVYATGRWLSSEAVYGAPFDIDVMQLE INTRF
Sequences:
>Translated_565_residues MISNVNRLSLAVGMVIATLVGQAAAAPAPSENATINLIRLLVEQGILKQDKADALIAQAQNEAAQAKQAAASTAVAAGPV AAPGDVRVQYVPAAVRDQIRDQVKAEVMATAKQENWAAPNTFPDWASRISFDGDIRLRDESRYYSGSNSNEIVDFAKLNN NGPYDVNPNSSTALPPLLNTREDRENLFRLRARLGMKAEISPQWTAGIRIGTGSDNNPVSTTQNLGGGFSKKDIWLDQGY LTWKPSEELTLTGGRFANPFMSTDMLYSNDLNFDGVAAIFDHKLSRDWGVFGTVGAFPVDYTNDTTTSNGFDKEESDNKW LYGAQIGAKWAINSNNRLKGALAYYRFDDIEGQRSSPCEPWAGAPGCDSDGTRAAFMQKGNSVFLLRDITPNPLNPTTTP QPQFVGLASEFNLLDLNVVWDADLPEDFKLRSQGNYIHNLGYDEGDMRKRSAGQLVNNLDSNGNIESGANAWMVQFTLGN ALELKKQGDWNLFAGYKYIQPDALPDGFNDSSFHLGGTNAKGYFLGGNYGLAKNVYATGRWLSSEAVYGAPFDIDVMQLE INTRF >Mature_565_residues MISNVNRLSLAVGMVIATLVGQAAAAPAPSENATINLIRLLVEQGILKQDKADALIAQAQNEAAQAKQAAASTAVAAGPV AAPGDVRVQYVPAAVRDQIRDQVKAEVMATAKQENWAAPNTFPDWASRISFDGDIRLRDESRYYSGSNSNEIVDFAKLNN NGPYDVNPNSSTALPPLLNTREDRENLFRLRARLGMKAEISPQWTAGIRIGTGSDNNPVSTTQNLGGGFSKKDIWLDQGY LTWKPSEELTLTGGRFANPFMSTDMLYSNDLNFDGVAAIFDHKLSRDWGVFGTVGAFPVDYTNDTTTSNGFDKEESDNKW LYGAQIGAKWAINSNNRLKGALAYYRFDDIEGQRSSPCEPWAGAPGCDSDGTRAAFMQKGNSVFLLRDITPNPLNPTTTP QPQFVGLASEFNLLDLNVVWDADLPEDFKLRSQGNYIHNLGYDEGDMRKRSAGQLVNNLDSNGNIESGANAWMVQFTLGN ALELKKQGDWNLFAGYKYIQPDALPDGFNDSSFHLGGTNAKGYFLGGNYGLAKNVYATGRWLSSEAVYGAPFDIDVMQLE INTRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61701; Mature: 61701
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISNVNRLSLAVGMVIATLVGQAAAAPAPSENATINLIRLLVEQGILKQDKADALIAQAQ CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH NEAAQAKQAAASTAVAAGPVAAPGDVRVQYVPAAVRDQIRDQVKAEVMATAKQENWAAPN HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCC TFPDWASRISFDGDIRLRDESRYYSGSNSNEIVDFAKLNNNGPYDVNPNSSTALPPLLNT CCHHHHHHCCCCCCEEEECCCCEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC REDRENLFRLRARLGMKAEISPQWTAGIRIGTGSDNNPVSTTQNLGGGFSKKDIWLDQGY CHHHHHHHHHHHHCCCCEECCCCEEEEEEEECCCCCCCCCCHHHCCCCCCCCCEEEECCE LTWKPSEELTLTGGRFANPFMSTDMLYSNDLNFDGVAAIFDHKLSRDWGVFGTVGAFPVD EEECCCCCEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCEECCCCCEEC YTNDTTTSNGFDKEESDNKWLYGAQIGAKWAINSNNRLKGALAYYRFDDIEGQRSSPCEP CCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCC WAGAPGCDSDGTRAAFMQKGNSVFLLRDITPNPLNPTTTPQPQFVGLASEFNLLDLNVVW CCCCCCCCCCCCEEHEEECCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEEEEE DADLPEDFKLRSQGNYIHNLGYDEGDMRKRSAGQLVNNLDSNGNIESGANAWMVQFTLGN CCCCCCCCEECCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCC ALELKKQGDWNLFAGYKYIQPDALPDGFNDSSFHLGGTNAKGYFLGGNYGLAKNVYATGR EEEEEECCCCEEEECEEEECCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCEEECCC WLSSEAVYGAPFDIDVMQLEINTRF EECCCCEECCCCCEEEEEEEEECCC >Mature Secondary Structure MISNVNRLSLAVGMVIATLVGQAAAAPAPSENATINLIRLLVEQGILKQDKADALIAQAQ CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH NEAAQAKQAAASTAVAAGPVAAPGDVRVQYVPAAVRDQIRDQVKAEVMATAKQENWAAPN HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCC TFPDWASRISFDGDIRLRDESRYYSGSNSNEIVDFAKLNNNGPYDVNPNSSTALPPLLNT CCHHHHHHCCCCCCEEEECCCCEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC REDRENLFRLRARLGMKAEISPQWTAGIRIGTGSDNNPVSTTQNLGGGFSKKDIWLDQGY CHHHHHHHHHHHHCCCCEECCCCEEEEEEEECCCCCCCCCCHHHCCCCCCCCCEEEECCE LTWKPSEELTLTGGRFANPFMSTDMLYSNDLNFDGVAAIFDHKLSRDWGVFGTVGAFPVD EEECCCCCEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCEECCCCCEEC YTNDTTTSNGFDKEESDNKWLYGAQIGAKWAINSNNRLKGALAYYRFDDIEGQRSSPCEP CCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCC WAGAPGCDSDGTRAAFMQKGNSVFLLRDITPNPLNPTTTPQPQFVGLASEFNLLDLNVVW CCCCCCCCCCCCEEHEEECCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEEEEE DADLPEDFKLRSQGNYIHNLGYDEGDMRKRSAGQLVNNLDSNGNIESGANAWMVQFTLGN CCCCCCCCEECCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCC ALELKKQGDWNLFAGYKYIQPDALPDGFNDSSFHLGGTNAKGYFLGGNYGLAKNVYATGR EEEEEECCCCEEEECEEEECCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCEEECCC WLSSEAVYGAPFDIDVMQLEINTRF EECCCCEECCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA