Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77457522
Identifier: 77457522
GI number: 77457522
Start: 1470909
End: 1471499
Strand: Direct
Name: 77457522
Synonym: Pfl01_1295
Alternate gene names: NA
Gene position: 1470909-1471499 (Clockwise)
Preceding gene: 77457521
Following gene: 77457523
Centisome position: 22.85
GC content: 64.64
Gene sequence:
>591_bases ATGTTCAACCGTTCTCTGTGCAACGCCTTCGCCGGCCTGCTGCTGGGCGCCGCTGCGCTGCCGGCCCAGGCCAACTGGTA TCTGGACGGCGAGTCGTCGCGGCTGTCGTTCGTCAGCACGAAAAACGCCAACGTGTCCGAAGTGCAGCGCTTTCTGGTGC TGCACGGCAAGGTCGATCCCGATGGCCGCGCCGAAGTCGAAGTCGAGCTGGACTCGATCAACAGCGGCATCCCGCTGCGC GACGAGCGCATGCGCAAGGAGTTGTTCCAGATCGAGCAATTCCCCGAAGCGACCATCACCACCCAGATCGACCTGCGCCC GATCAACGATCTGGCCCCCGGCGCGCAGCTGGAATTGCGCCTGCCGTTGACCGTCAACCTGCACGGCAAGCAACACGAAT ACCCCGCCGAACTGCTTGCCACGCGCCTCGATGACCGACGCTTTCAAGTGGTGACGCTGGAGCCGCTGGTGATCAGCGCC GAGGATTTCGATCTGCTGCCGGGCCTGGAAAGCCTGCGCAACCTGGCCGGCCTGTCGGCCATCAGTCTGTCGGTGCCGGT GGGTGCGGTGCTGATCTTCACGGCGCGCTGA
Upstream 100 bases:
>100_bases GCAACAGGCACTGTCCTGAGTGTTTGCACAGACTGACAGTTTGCAATAACGCCACGGCCAGTTAAGGTTCGTGCACGTTT ATCGGCCCCACGAGTCTTCA
Downstream 100 bases:
>100_bases CATGCGCGGCGCGGTGTTTCCGTGGCGTGATGGCAACCGCTTCGAGCTGTTGATCGACGGCCCGCAATTCTTCCCGCGCA TGCTCGACGAGATTGCCCGC
Product: YceI
Products: NA
Alternate protein names: YceI Like Family; YceI Like Family Protein; YceI-Like Family Protein
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MFNRSLCNAFAGLLLGAAALPAQANWYLDGESSRLSFVSTKNANVSEVQRFLVLHGKVDPDGRAEVEVELDSINSGIPLR DERMRKELFQIEQFPEATITTQIDLRPINDLAPGAQLELRLPLTVNLHGKQHEYPAELLATRLDDRRFQVVTLEPLVISA EDFDLLPGLESLRNLAGLSAISLSVPVGAVLIFTAR
Sequences:
>Translated_196_residues MFNRSLCNAFAGLLLGAAALPAQANWYLDGESSRLSFVSTKNANVSEVQRFLVLHGKVDPDGRAEVEVELDSINSGIPLR DERMRKELFQIEQFPEATITTQIDLRPINDLAPGAQLELRLPLTVNLHGKQHEYPAELLATRLDDRRFQVVTLEPLVISA EDFDLLPGLESLRNLAGLSAISLSVPVGAVLIFTAR >Mature_196_residues MFNRSLCNAFAGLLLGAAALPAQANWYLDGESSRLSFVSTKNANVSEVQRFLVLHGKVDPDGRAEVEVELDSINSGIPLR DERMRKELFQIEQFPEATITTQIDLRPINDLAPGAQLELRLPLTVNLHGKQHEYPAELLATRLDDRRFQVVTLEPLVISA EDFDLLPGLESLRNLAGLSAISLSVPVGAVLIFTAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21601; Mature: 21601
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNRSLCNAFAGLLLGAAALPAQANWYLDGESSRLSFVSTKNANVSEVQRFLVLHGKVDP CCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHEECCCCC DGRAEVEVELDSINSGIPLRDERMRKELFQIEQFPEATITTQIDLRPINDLAPGAQLELR CCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCEEEEE LPLTVNLHGKQHEYPAELLATRLDDRRFQVVTLEPLVISAEDFDLLPGLESLRNLAGLSA ECEEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCCCHHHHHHHHCCEE ISLSVPVGAVLIFTAR EEEECCCCEEEEEEEC >Mature Secondary Structure MFNRSLCNAFAGLLLGAAALPAQANWYLDGESSRLSFVSTKNANVSEVQRFLVLHGKVDP CCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHEECCCCC DGRAEVEVELDSINSGIPLRDERMRKELFQIEQFPEATITTQIDLRPINDLAPGAQLELR CCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCEEEEE LPLTVNLHGKQHEYPAELLATRLDDRRFQVVTLEPLVISAEDFDLLPGLESLRNLAGLSA ECEEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCCCHHHHHHHHCCEE ISLSVPVGAVLIFTAR EEEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA