Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is mhpR [C]
Identifier: 77457521
GI number: 77457521
Start: 1470057
End: 1470827
Strand: Direct
Name: mhpR [C]
Synonym: Pfl01_1294
Alternate gene names: 77457521
Gene position: 1470057-1470827 (Clockwise)
Preceding gene: 77457520
Following gene: 77457522
Centisome position: 22.83
GC content: 64.33
Gene sequence:
>771_bases ATGGGCAGCAAGGCAGACACCGGCAGCGTGCGCTCGGTCGAACGGGCGCTGGCCATCGTCGAGTTGCTCGGCGAGCATCA GGCGTTGGGGCTGGAAGAGTTGCACTATCTGACGGCTCTGCCCAAGGCCACGGTGTCGCGGATGCTCGCGACCTTGCAGG AGCAGGGCTGGGTCTATCGCGGCCTCAGCGATCGCCGCTACCGGTTGTGCGCCAAGCGACTGTTCGGTGACCGTCAGCAA CGTTTCAAACGCCACCTTGTGGAAAGCGCCGCGCCGATGCTGCTGGAGCTGAGCGAGCGCACCGGGCTGGTGGCGGATCT GTCGTGCTTCGACGGCGAGCGGGTCGAAGTGATGGAAAGCGCGATTCCGCAAGTGCTGCGCAAGCGCTATCCGAACAACT GTCAGATCGTCGGCCATCACGCCAGCCTGTTTCATTCGGCGATGGGCCGCGCGTGCCTTGGCGAACTTGATAGCCGGGAC GTGAAACGTCTGGCCGAACGCGAACAGTTGGCGGATGACGGTGTATTGCAGGCCACCGAACAAGCCTTGCATCAGGGCTT CGGCCAGCGCACAGAAGGTTATTGGGAATACCCGGTGCGCCTGCCGTTCCTGATTCGCGCGGTGGCCTTGCCGATCCGTG CCCAAGGGCGGCTGGTCGGCAGCATGGCGCTGCACTGGCCAATGGATCAGGCGCCGGTGGAACGGGTGCTGAGCCTGCAC CTCAACAGCCTCGCGTCGACCATCGGCGAGGTGCAACAGGCACTGTCCTGA
Upstream 100 bases:
>100_bases GGGTCGAACGGCGACCGCCGGCATGCCTGCAATCGGCCTGAGCGGCCCGCATCTTGCTGCACGAAGTGATCTTTCATCCG CATCCATGGAGGTCGAACAC
Downstream 100 bases:
>100_bases GTGTTTGCACAGACTGACAGTTTGCAATAACGCCACGGCCAGTTAAGGTTCGTGCACGTTTATCGGCCCCACGAGTCTTC AATGTTCAACCGTTCTCTGT
Product: IclR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator IclR Family; Transcriptional Regulator Iclr Family
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MGSKADTGSVRSVERALAIVELLGEHQALGLEELHYLTALPKATVSRMLATLQEQGWVYRGLSDRRYRLCAKRLFGDRQQ RFKRHLVESAAPMLLELSERTGLVADLSCFDGERVEVMESAIPQVLRKRYPNNCQIVGHHASLFHSAMGRACLGELDSRD VKRLAEREQLADDGVLQATEQALHQGFGQRTEGYWEYPVRLPFLIRAVALPIRAQGRLVGSMALHWPMDQAPVERVLSLH LNSLASTIGEVQQALS
Sequences:
>Translated_256_residues MGSKADTGSVRSVERALAIVELLGEHQALGLEELHYLTALPKATVSRMLATLQEQGWVYRGLSDRRYRLCAKRLFGDRQQ RFKRHLVESAAPMLLELSERTGLVADLSCFDGERVEVMESAIPQVLRKRYPNNCQIVGHHASLFHSAMGRACLGELDSRD VKRLAEREQLADDGVLQATEQALHQGFGQRTEGYWEYPVRLPFLIRAVALPIRAQGRLVGSMALHWPMDQAPVERVLSLH LNSLASTIGEVQQALS >Mature_255_residues GSKADTGSVRSVERALAIVELLGEHQALGLEELHYLTALPKATVSRMLATLQEQGWVYRGLSDRRYRLCAKRLFGDRQQR FKRHLVESAAPMLLELSERTGLVADLSCFDGERVEVMESAIPQVLRKRYPNNCQIVGHHASLFHSAMGRACLGELDSRDV KRLAEREQLADDGVLQATEQALHQGFGQRTEGYWEYPVRLPFLIRAVALPIRAQGRLVGSMALHWPMDQAPVERVLSLHL NSLASTIGEVQQALS
Specific function: Activator Of The Mhprabcdef Operon Coding For Components Of The 3-Hydroxyphenylpropionate Degradation Pathway. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI145693096, Length=235, Percent_Identity=26.3829787234043, Blast_Score=61, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28648; Mature: 28517
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSKADTGSVRSVERALAIVELLGEHQALGLEELHYLTALPKATVSRMLATLQEQGWVYR CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHCCCEEE GLSDRRYRLCAKRLFGDRQQRFKRHLVESAAPMLLELSERTGLVADLSCFDGERVEVMES CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCHHHHHHHH AIPQVLRKRYPNNCQIVGHHASLFHSAMGRACLGELDSRDVKRLAEREQLADDGVLQATE HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHH QALHQGFGQRTEGYWEYPVRLPFLIRAVALPIRAQGRLVGSMALHWPMDQAPVERVLSLH HHHHHCCCCCCCCCEECCCHHHHHHHHHHHCHHHCCHHHHHHHHHCCCCHHHHHHHHHHH LNSLASTIGEVQQALS HHHHHHHHHHHHHHHC >Mature Secondary Structure GSKADTGSVRSVERALAIVELLGEHQALGLEELHYLTALPKATVSRMLATLQEQGWVYR CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHCCCEEE GLSDRRYRLCAKRLFGDRQQRFKRHLVESAAPMLLELSERTGLVADLSCFDGERVEVMES CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCHHHHHHHH AIPQVLRKRYPNNCQIVGHHASLFHSAMGRACLGELDSRDVKRLAEREQLADDGVLQATE HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHH QALHQGFGQRTEGYWEYPVRLPFLIRAVALPIRAQGRLVGSMALHWPMDQAPVERVLSLH HHHHHCCCCCCCCCEECCCHHHHHHHHHHHCHHHCCHHHHHHHHHCCCCHHHHHHHHHHH LNSLASTIGEVQQALS HHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA