Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is cls [H]
Identifier: 77457523
GI number: 77457523
Start: 1471501
End: 1472658
Strand: Direct
Name: cls [H]
Synonym: Pfl01_1296
Alternate gene names: 77457523
Gene position: 1471501-1472658 (Clockwise)
Preceding gene: 77457522
Following gene: 77457525
Centisome position: 22.86
GC content: 64.34
Gene sequence:
>1158_bases ATGCGCGGCGCGGTGTTTCCGTGGCGTGATGGCAACCGCTTCGAGCTGTTGATCGACGGCCCGCAATTCTTCCCGCGCAT GCTCGACGAGATTGCCCGCGCCCGTGAGCAGATCGAACTGGAGTTGTATCTGGTGGAAGCCGGTGCCTGTGCCGAAACCA TCGTGCAGGCACTGGTGCTGGCGGCGGAGCGGGGCGTGCGGGTGCGTTGCCTGTTCGATGATTACGGCAGCCTCGCGTTC ACCCTCACGCTGCGCCGGCGGCTGACTGGTGCCGGGGTCGAGCTGCGTTTTTACAACCGGCTGAACTGGCGGCGCTGGGT CGGCAATTTCTATCGCGATCATCGCAAGCTGTTGCTGGTCGACCAGCGTCTGGCGGTGGTCGGCGGCACCGGGGTCACCG ATGAGTTCTGGACGCCGGGCCACGACACCAGCGAATGGCACGAGGTCATGGTGGAAATCACCGGCCCGCTGGTGCTCGAC TGGCAGTTGCTGTTCGACCGCCAATGGATCGCCAACCGCCATCGCCGGGCCTGGCGGCCCAACGCGCATTTTGGGCTGCC ACGGTTGCCCCGTGTGCCGGACACGGGCGAGGGCATGGGCCGTGTGGCCTACGCCGACGCCCGCCAGCATCGGGACATTC TGCAATCGCTGTTCCGCGCCTTGAACAGTGGCCAAAAGCGTATCTGGCTGGCCACGCCGTACTTCCTGCCGACCTGGAAA ATCCGCCGCTCCCTGCGCAAGGCTGCCGCCCGTGGCCTCGACGTGCGTCTGCTGCTGACCGGGCCGCGCACCGATCACCC GTCGGTGCGTTATGCCGGGCATCGCTACTACCCGCGCCTGCTCAAGGCCGGGGTGAAAATCTACGAATACCAGCCGTGTT TCCTGCACCTGAAAATGGTGCTGGTGGACGACTGGGTGAGCATCGGCTCGTGCAATTTCGATCACTGGAATCTGCGCTTC AATCTTGAAGCGAATCTGGAAGCGCTGGATCCGTCATTGACGGCAGCGGTGGCGGCGAGTTTCGAGAAGGACTTCGGCCT GAGTCAGCAGGTGAGTCTGGAGGAATGGCGAAAACGGCCACTGTGGCGGCGGGTGAAGCAGCGGATCTGGGGCTGGGTGG ATCGGGTGGTGGTCAACTTGCTCGACAGACGCGGCTAG
Upstream 100 bases:
>100_bases CTGCTGCCGGGCCTGGAAAGCCTGCGCAACCTGGCCGGCCTGTCGGCCATCAGTCTGTCGGTGCCGGTGGGTGCGGTGCT GATCTTCACGGCGCGCTGAC
Downstream 100 bases:
>100_bases TCGCTGTCCCCGATTGATCGTTCCCACGTCGAGGCGTCGAACCGTCCGCGTGGGAATGCAGCCCGGGACGCGCCGCGTTC CAAAGCGGACGCAGAGCGTC
Product: phospholipase D/transphosphatidylase
Products: cardiolipin; glycerol [C]
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MRGAVFPWRDGNRFELLIDGPQFFPRMLDEIARAREQIELELYLVEAGACAETIVQALVLAAERGVRVRCLFDDYGSLAF TLTLRRRLTGAGVELRFYNRLNWRRWVGNFYRDHRKLLLVDQRLAVVGGTGVTDEFWTPGHDTSEWHEVMVEITGPLVLD WQLLFDRQWIANRHRRAWRPNAHFGLPRLPRVPDTGEGMGRVAYADARQHRDILQSLFRALNSGQKRIWLATPYFLPTWK IRRSLRKAAARGLDVRLLLTGPRTDHPSVRYAGHRYYPRLLKAGVKIYEYQPCFLHLKMVLVDDWVSIGSCNFDHWNLRF NLEANLEALDPSLTAAVAASFEKDFGLSQQVSLEEWRKRPLWRRVKQRIWGWVDRVVVNLLDRRG
Sequences:
>Translated_385_residues MRGAVFPWRDGNRFELLIDGPQFFPRMLDEIARAREQIELELYLVEAGACAETIVQALVLAAERGVRVRCLFDDYGSLAF TLTLRRRLTGAGVELRFYNRLNWRRWVGNFYRDHRKLLLVDQRLAVVGGTGVTDEFWTPGHDTSEWHEVMVEITGPLVLD WQLLFDRQWIANRHRRAWRPNAHFGLPRLPRVPDTGEGMGRVAYADARQHRDILQSLFRALNSGQKRIWLATPYFLPTWK IRRSLRKAAARGLDVRLLLTGPRTDHPSVRYAGHRYYPRLLKAGVKIYEYQPCFLHLKMVLVDDWVSIGSCNFDHWNLRF NLEANLEALDPSLTAAVAASFEKDFGLSQQVSLEEWRKRPLWRRVKQRIWGWVDRVVVNLLDRRG >Mature_385_residues MRGAVFPWRDGNRFELLIDGPQFFPRMLDEIARAREQIELELYLVEAGACAETIVQALVLAAERGVRVRCLFDDYGSLAF TLTLRRRLTGAGVELRFYNRLNWRRWVGNFYRDHRKLLLVDQRLAVVGGTGVTDEFWTPGHDTSEWHEVMVEITGPLVLD WQLLFDRQWIANRHRRAWRPNAHFGLPRLPRVPDTGEGMGRVAYADARQHRDILQSLFRALNSGQKRIWLATPYFLPTWK IRRSLRKAAARGLDVRLLLTGPRTDHPSVRYAGHRYYPRLLKAGVKIYEYQPCFLHLKMVLVDDWVSIGSCNFDHWNLRF NLEANLEALDPSLTAAVAASFEKDFGLSQQVSLEEWRKRPLWRRVKQRIWGWVDRVVVNLLDRRG
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787007, Length=374, Percent_Identity=32.3529411764706, Blast_Score=158, Evalue=5e-40, Organism=Escherichia coli, GI1787502, Length=366, Percent_Identity=28.6885245901639, Blast_Score=157, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.- [C]
Molecular weight: Translated: 45027; Mature: 45027
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGAVFPWRDGNRFELLIDGPQFFPRMLDEIARAREQIELELYLVEAGACAETIVQALVL CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHEEEEEEEEECCCHHHHHHHHHHH AAERGVRVRCLFDDYGSLAFTLTLRRRLTGAGVELRFYNRLNWRRWVGNFYRDHRKLLLV HHCCCCEEEEEECCCCCEEEEEEEHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEE DQRLAVVGGTGVTDEFWTPGHDTSEWHEVMVEITGPLVLDWQLLFDRQWIANRHRRAWRP ECEEEEECCCCCCCCCCCCCCCCHHHHHHHHEECCCEEEEHHHHHHHHHHHHHHHHCCCC NAHFGLPRLPRVPDTGEGMGRVAYADARQHRDILQSLFRALNSGQKRIWLATPYFLPTWK CCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHH IRRSLRKAAARGLDVRLLLTGPRTDHPSVRYAGHRYYPRLLKAGVKIYEYQPCFLHLKMV HHHHHHHHHHCCCEEEEEEECCCCCCCCCEECCCHHHHHHHHCCCEEEEECCHHHHHHHH LVDDWVSIGSCNFDHWNLRFNLEANLEALDPSLTAAVAASFEKDFGLSQQVSLEEWRKRP HHHHHHHHCCCCCCEEEEEEEEECCCHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCH LWRRVKQRIWGWVDRVVVNLLDRRG HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRGAVFPWRDGNRFELLIDGPQFFPRMLDEIARAREQIELELYLVEAGACAETIVQALVL CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHEEEEEEEEECCCHHHHHHHHHHH AAERGVRVRCLFDDYGSLAFTLTLRRRLTGAGVELRFYNRLNWRRWVGNFYRDHRKLLLV HHCCCCEEEEEECCCCCEEEEEEEHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEE DQRLAVVGGTGVTDEFWTPGHDTSEWHEVMVEITGPLVLDWQLLFDRQWIANRHRRAWRP ECEEEEECCCCCCCCCCCCCCCCHHHHHHHHEECCCEEEEHHHHHHHHHHHHHHHHCCCC NAHFGLPRLPRVPDTGEGMGRVAYADARQHRDILQSLFRALNSGQKRIWLATPYFLPTWK CCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHH IRRSLRKAAARGLDVRLLLTGPRTDHPSVRYAGHRYYPRLLKAGVKIYEYQPCFLHLKMV HHHHHHHHHHCCCEEEEEEECCCCCCCCCEECCCHHHHHHHHCCCEEEEECCHHHHHHHH LVDDWVSIGSCNFDHWNLRFNLEANLEALDPSLTAAVAASFEKDFGLSQQVSLEEWRKRP HHHHHHHHCCCCCCEEEEEEEEECCCHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCH LWRRVKQRIWGWVDRVVVNLLDRRG HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2 L-1-phosphatidyl-glycerol [C]
Specific reaction: 2 L-1-phosphatidyl-glycerol = cardiolipin + glycerol [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10585141 [H]