Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is hipO [H]
Identifier: 77457518
GI number: 77457518
Start: 1465978
End: 1467153
Strand: Direct
Name: hipO [H]
Synonym: Pfl01_1291
Alternate gene names: 77457518
Gene position: 1465978-1467153 (Clockwise)
Preceding gene: 77457517
Following gene: 77457519
Centisome position: 22.77
GC content: 65.73
Gene sequence:
>1176_bases ATGCCCCGACATCAGCACATTCTGGCCTGGCTCAACGATGTGGCCAGCGACCTGCACGCCACCCGCCAGGACATTCACGC CCACCCTGAACTCGGTTTCGAAGAAAGCCGCACCTCGGCGCTGGTCGCCAGGTCGCTCGAAGAGTGGGGCTATGAAGTCC ACACCGGCGTCGGCAAGACCGGCGTGGTCGGCGTGCTGCGCAACGGCAGCAGCACGCGCAAACTCGGGCTGCGGGCCGAC ATGGATGCGCTGCCGATCATCGAAAATACCGGTGTCGCCTACAGCAGCCGGCATCAAGGCTGCATGCACGCCTGCGGCCA CGACGGGCACACCGCGATGTTGCTCGGTGCGGCGCGTTATCTGGCCGCGACCCGTCAGTTCGACGGCACCCTGACGCTGA TTTTTCAGCCCGCCGAAGAGGGCCAGGGCGGGGCGGAAGCGATGCTCGCCGATGGCCTGCTCGAACGTTTTCCGTGCGAT GCGCTGTTCGGCATGCACAACATGCCGGGCCTGCCAGCGGGGCACCTGGGCTTTCGCGAAGGGCCGATGATGGCTTCGCA GGATCTGCTCACGGTGACCATCGAAGGTGTCGGCGGCCACGGCTCGATGCCGCATCTGGCGGTGGATCCGCTGGTTGCCG CAGCCAGTGTGGTGATGGCTTTGCAAACCGTGGTCGCGCGCAACATCGATGCGCAGCAGGCGGCGGTGGTAACGGTCGGC GCATTGCAGGCCGGCGAAGCGGCGAACGTGATTCCGCAACAGGCGATCCTGCGCCTGAGCTTGCGTGCGTTGAATGCCGA AGTCCGTGTTCAGACACTGGACCGCGTACGCTCGATCATCGAAGCGCAGGCCGAGAGCTTCGGCTGCACCTCGACCATCG AACACCGCCCGGCCTACCCGGTGCTGGTCAACCACGCCGCCGAAACCGAGTTCGCCCGTCAGGTCGGCGTCGAACTGGTC GGTACCGACGCCGTCGATGGCAACACTCCGAAACTGATGGGCAGCGAAGACTTCGCCTGGATGCTCCAGCGCTGCCCCGG CGCCTATCTGTTCATCGGCAACGGCGTGGCGCGGCCGATGGTGCATAACCCGGCCTACGACTTCAACGATGACATCCTGC TGACCGGCGCGGCGTATTGGGGCGCGCTCACCGAGAGCTGGCTCAAGCCGGCCTGA
Upstream 100 bases:
>100_bases TGTCTCGCGGTTATCTGGCGGTGAGCACGACCTGCCGTTCACGTGTCGTGAAACAACACCGAACAACAAGACCGGGAACA CCCGCGCGAGGAGATCCGTC
Downstream 100 bases:
>100_bases TTTCTTCACTTTTTGCTGCCGCTGGAACGCAGGTGCGCACGCGCCTGCGTGGTCAACCCACAGCTTCTGGAGAATCCCCA TGCAGACTTCGAACGCAGGC
Product: peptidase M20D, amidohydrolase
Products: NA
Alternate protein names: Benzoylglycine amidohydrolase; Hippuricase [H]
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MPRHQHILAWLNDVASDLHATRQDIHAHPELGFEESRTSALVARSLEEWGYEVHTGVGKTGVVGVLRNGSSTRKLGLRAD MDALPIIENTGVAYSSRHQGCMHACGHDGHTAMLLGAARYLAATRQFDGTLTLIFQPAEEGQGGAEAMLADGLLERFPCD ALFGMHNMPGLPAGHLGFREGPMMASQDLLTVTIEGVGGHGSMPHLAVDPLVAAASVVMALQTVVARNIDAQQAAVVTVG ALQAGEAANVIPQQAILRLSLRALNAEVRVQTLDRVRSIIEAQAESFGCTSTIEHRPAYPVLVNHAAETEFARQVGVELV GTDAVDGNTPKLMGSEDFAWMLQRCPGAYLFIGNGVARPMVHNPAYDFNDDILLTGAAYWGALTESWLKPA
Sequences:
>Translated_391_residues MPRHQHILAWLNDVASDLHATRQDIHAHPELGFEESRTSALVARSLEEWGYEVHTGVGKTGVVGVLRNGSSTRKLGLRAD MDALPIIENTGVAYSSRHQGCMHACGHDGHTAMLLGAARYLAATRQFDGTLTLIFQPAEEGQGGAEAMLADGLLERFPCD ALFGMHNMPGLPAGHLGFREGPMMASQDLLTVTIEGVGGHGSMPHLAVDPLVAAASVVMALQTVVARNIDAQQAAVVTVG ALQAGEAANVIPQQAILRLSLRALNAEVRVQTLDRVRSIIEAQAESFGCTSTIEHRPAYPVLVNHAAETEFARQVGVELV GTDAVDGNTPKLMGSEDFAWMLQRCPGAYLFIGNGVARPMVHNPAYDFNDDILLTGAAYWGALTESWLKPA >Mature_390_residues PRHQHILAWLNDVASDLHATRQDIHAHPELGFEESRTSALVARSLEEWGYEVHTGVGKTGVVGVLRNGSSTRKLGLRADM DALPIIENTGVAYSSRHQGCMHACGHDGHTAMLLGAARYLAATRQFDGTLTLIFQPAEEGQGGAEAMLADGLLERFPCDA LFGMHNMPGLPAGHLGFREGPMMASQDLLTVTIEGVGGHGSMPHLAVDPLVAAASVVMALQTVVARNIDAQQAAVVTVGA LQAGEAANVIPQQAILRLSLRALNAEVRVQTLDRVRSIIEAQAESFGCTSTIEHRPAYPVLVNHAAETEFARQVGVELVG TDAVDGNTPKLMGSEDFAWMLQRCPGAYLFIGNGVARPMVHNPAYDFNDDILLTGAAYWGALTESWLKPA
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=420, Percent_Identity=28.0952380952381, Blast_Score=112, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.32 [H]
Molecular weight: Translated: 41789; Mature: 41658
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRHQHILAWLNDVASDLHATRQDIHAHPELGFEESRTSALVARSLEEWGYEVHTGVGKT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCC GVVGVLRNGSSTRKLGLRADMDALPIIENTGVAYSSRHQGCMHACGHDGHTAMLLGAARY CEEEEEECCCCCCEECCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHH LAATRQFDGTLTLIFQPAEEGQGGAEAMLADGLLERFPCDALFGMHNMPGLPAGHLGFRE HHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCC GPMMASQDLLTVTIEGVGGHGSMPHLAVDPLVAAASVVMALQTVVARNIDAQQAAVVTVG CCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEE ALQAGEAANVIPQQAILRLSLRALNAEVRVQTLDRVRSIIEAQAESFGCTSTIEHRPAYP CCCCCCHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC VLVNHAAETEFARQVGVELVGTDAVDGNTPKLMGSEDFAWMLQRCPGAYLFIGNGVARPM EEECCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCC VHNPAYDFNDDILLTGAAYWGALTESWLKPA CCCCCCCCCCCEEEECHHHHHHHHHHHCCCC >Mature Secondary Structure PRHQHILAWLNDVASDLHATRQDIHAHPELGFEESRTSALVARSLEEWGYEVHTGVGKT CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCC GVVGVLRNGSSTRKLGLRADMDALPIIENTGVAYSSRHQGCMHACGHDGHTAMLLGAARY CEEEEEECCCCCCEECCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHH LAATRQFDGTLTLIFQPAEEGQGGAEAMLADGLLERFPCDALFGMHNMPGLPAGHLGFRE HHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCC GPMMASQDLLTVTIEGVGGHGSMPHLAVDPLVAAASVVMALQTVVARNIDAQQAAVVTVG CCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEE ALQAGEAANVIPQQAILRLSLRALNAEVRVQTLDRVRSIIEAQAESFGCTSTIEHRPAYP CCCCCCHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC VLVNHAAETEFARQVGVELVGTDAVDGNTPKLMGSEDFAWMLQRCPGAYLFIGNGVARPM EEECCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCC VHNPAYDFNDDILLTGAAYWGALTESWLKPA CCCCCCCCCCCEEEECHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7730270; 10688204 [H]