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The map label for this gene is pcaH [H]

Identifier: 77457497

GI number: 77457497

Start: 1443641

End: 1444345

Strand: Direct

Name: pcaH [H]

Synonym: Pfl01_1270

Alternate gene names: 77457497

Gene position: 1443641-1444345 (Clockwise)

Preceding gene: 77457496

Following gene: 77457498

Centisome position: 22.42

GC content: 64.26

Gene sequence:

>705_bases
ATGACTGACAAGCCTGGTTACCGCCGCCCGCAGGAAGGCACCCAGCCGCCGTACCTGCACCCGACCTATCAATCCACCAA
TCTGCGCTCGCCGTCCAAGCCGTTGGTGTTCCTGCCGCATTCGCTGTCGGAAATCACCGGCCCGACCATCGGCGCCGAGC
GTGTGGCCGATACCGACAACGATCTGACTGCCCAGCATCAGGGTGAACCGCTCGGCGAGCGGATCATCATTCACGGGCGT
GTGCTCGACGAAGACGGTCTGCCGGTGCCGGGGATTCTGGTGGAGATCTGGCAGGCCAACGCCGCCGGTCGCTACAACCA
TGCCCGTGACCTGCACGACGCACCGCTGGACCCGAACTTCACCGGCACCGGCCGCACCGTGACCGACGCCGACGGCTGGT
ATCAGTTCCAGACCATCAAGCCCGGCGCCTATCCGTGGGGCAACCACCACAACGCCTGGCGCCCGGCGCACGTGCATTTC
TCGTTGTTCGGACCGAGCATCCTGACGCGCCTGGTCACGCAAATGTATTTCCCGGGCGACCCGCTGCTGGCCTACGACCC
AATCTACAACTGCGTGCCGGACACCTCGGCCAAGGAACGCCTGATCGCCGCTTTCGATCTGGAAAAAACCATTCCGTCCT
ACGCCCTCGCTTATCGCTGGGACATCGTGCTGCGCGGCCGCGAAGCCACGCCGATGGAGAAATGA

Upstream 100 bases:

>100_bases
AGGTCTGGCGACCATGTGCGTCGGTGTCGGCCAGGGTCTGGCCCTTGCCATCGAACGCGTCTGACGCAAGCCGTGACGAA
AAAGAACAGAGGAAAGCGAA

Downstream 100 bases:

>100_bases
GATGACCCTGACTGCGACCACGTCCCACACCGTCGGGCCGTATTACCACATCGGCCTGACCTGGCTGAACCGTGAAAACC
TCGCCAACGAACTGACCCTC

Product: protocatechuate 3,4-dioxygenase subunit beta

Products: NA

Alternate protein names: 3,4-PCD [H]

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MTDKPGYRRPQEGTQPPYLHPTYQSTNLRSPSKPLVFLPHSLSEITGPTIGAERVADTDNDLTAQHQGEPLGERIIIHGR
VLDEDGLPVPGILVEIWQANAAGRYNHARDLHDAPLDPNFTGTGRTVTDADGWYQFQTIKPGAYPWGNHHNAWRPAHVHF
SLFGPSILTRLVTQMYFPGDPLLAYDPIYNCVPDTSAKERLIAAFDLEKTIPSYALAYRWDIVLRGREATPMEK

Sequences:

>Translated_234_residues
MTDKPGYRRPQEGTQPPYLHPTYQSTNLRSPSKPLVFLPHSLSEITGPTIGAERVADTDNDLTAQHQGEPLGERIIIHGR
VLDEDGLPVPGILVEIWQANAAGRYNHARDLHDAPLDPNFTGTGRTVTDADGWYQFQTIKPGAYPWGNHHNAWRPAHVHF
SLFGPSILTRLVTQMYFPGDPLLAYDPIYNCVPDTSAKERLIAAFDLEKTIPSYALAYRWDIVLRGREATPMEK
>Mature_233_residues
TDKPGYRRPQEGTQPPYLHPTYQSTNLRSPSKPLVFLPHSLSEITGPTIGAERVADTDNDLTAQHQGEPLGERIIIHGRV
LDEDGLPVPGILVEIWQANAAGRYNHARDLHDAPLDPNFTGTGRTVTDADGWYQFQTIKPGAYPWGNHHNAWRPAHVHFS
LFGPSILTRLVTQMYFPGDPLLAYDPIYNCVPDTSAKERLIAAFDLEKTIPSYALAYRWDIVLRGREATPMEK

Specific function: Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway [H]

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000627
- InterPro:   IPR015889
- InterPro:   IPR012785 [H]

Pfam domain/function: PF00775 Dioxygenase_C [H]

EC number: =1.13.11.3 [H]

Molecular weight: Translated: 26233; Mature: 26102

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS00083 INTRADIOL_DIOXYGENAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKPGYRRPQEGTQPPYLHPTYQSTNLRSPSKPLVFLPHSLSEITGPTIGAERVADTDN
CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEECCCCHHHHCCCCCCHHHHCCCCC
DLTAQHQGEPLGERIIIHGRVLDEDGLPVPGILVEIWQANAAGRYNHARDLHDAPLDPNF
CCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCC
TGTGRTVTDADGWYQFQTIKPGAYPWGNHHNAWRPAHVHFSLFGPSILTRLVTQMYFPGD
CCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHCCCCC
PLLAYDPIYNCVPDTSAKERLIAAFDLEKTIPSYALAYRWDIVLRGREATPMEK
CCEEECCHHHCCCCCCHHHHEEEECCHHHHCCHHEEEEEEEEEEECCCCCCCCC
>Mature Secondary Structure 
TDKPGYRRPQEGTQPPYLHPTYQSTNLRSPSKPLVFLPHSLSEITGPTIGAERVADTDN
CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEECCCCHHHHCCCCCCHHHHCCCCC
DLTAQHQGEPLGERIIIHGRVLDEDGLPVPGILVEIWQANAAGRYNHARDLHDAPLDPNF
CCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCC
TGTGRTVTDADGWYQFQTIKPGAYPWGNHHNAWRPAHVHFSLFGPSILTRLVTQMYFPGD
CCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHCCCCC
PLLAYDPIYNCVPDTSAKERLIAAFDLEKTIPSYALAYRWDIVLRGREATPMEK
CCEEECCHHHCCCCCCHHHHEEEECCHHHHCCHHEEEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2808303 [H]