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The map label for this gene is yiaD [H]

Identifier: 77457455

GI number: 77457455

Start: 1401022

End: 1402116

Strand: Direct

Name: yiaD [H]

Synonym: Pfl01_1228

Alternate gene names: 77457455

Gene position: 1401022-1402116 (Clockwise)

Preceding gene: 77457454

Following gene: 77457456

Centisome position: 21.76

GC content: 63.47

Gene sequence:

>1095_bases
ATGTCGTCCAAACAAACTCTCGCCCTGGCCCTGTGTTTCGCAATCACCGGTTGTGCACAGACTCCGAAGAACGACGCCGA
TGGCGGTAGCTGGTGGCCGTTCGGTTCTTCCGACAAAGTTGCAGCCAAGGAGCCGGCTCCGGCTCCTGCCCCATTGAAAC
CGGCCGCCACCGCGCCGGTGGCCAAGGCTGAGAGCAGCAGTCCGTGGTACTGGCCGTTTGGCTCGGACGACTCGGCGGCA
GCCAAGCCAGAAGTGAAAGCTGAAGCCAAGCCCGAAGCAAAACCGGTCGAAGTCGCCAAGGCCGAGGCCGACAAGGGTGG
CAAATGGTGGTGGCCGTTTGGCGGCAAGGAGCAGGACACGGCCAAAGTCGTGCCGATGCCCGATCCGAAAGTGACCCAAG
CGTGGCTGGATGACTACGAACCGCGCCTGCGCACCGCAATCAAGGACAGCAACCTGCAACTCGAACGCCGTGAAAACGTG
CTGGTCGTGACCGCGCCGGTGGAAGGCTCGTTCAACCCGGATCGCCCGGCCATGCTGCTGCCAGTGACCCTCGGTCCGTT
CACCCGTGTGGCGAAAATCCTCGAAGCCGACCCGAAAACCGCCGTACTGGTGCTCGGTCACAGTGACACCACCGGTGCTG
CGCCGGCCAACGTCAAGTTGAGCCAGGAACGCGCCCAGGCTGTGGCGGCGATCTTCCGCCTGAGCGGTCTGCAACGTGAT
CGCCTGATGCTGCGCGGCATGGGTTCCGAAGCACCGCGTGCCGCCAACGACAGCGTTGAAGGCCGTGCCCTGAACCGCCG
TGTAGAACTGTTGGTGACCCCGCAGAACACCATGGTCGCGCTGCTGAGCAAATACAACATGCCAGCACCGAAGCCAGTGA
CCATGGTCGCTGCCCAGGACGTCAAGCCTGCCGCCAAACCGGTGACCCCGGCGCCGGCGGCGAAGAAAGCCGCTGTACCG
GCCACCAAAAAGGCCCCGGCCAAGAAAGCCGCCGCCAAGGCTCCAGCGAAAAAGGCCCCGGCGAAAAAGACTGCACCCGC
CAAAGCTGCCGCAACCGACAAGAAAGTCGCTGCGACCGATACCACCAAAAAGTGA

Upstream 100 bases:

>100_bases
GTTCCAGGGCCGGAACCTCATGGCGATTTTCGTTTCAAAGCGTCTGTTTATCCGGGCGAAAGTCCTCTGATTGTTCACTA
ATTCTTTTTGTGGGTTTCCA

Downstream 100 bases:

>100_bases
TCCGCTAACGAAAAGGAATGCGCCGTGACCCAGTCTCTGGCAGATATGCGTCGTGATTACACCCGGGATGGCCTGACCGA
GGCGCAAGCCCCGGCGGAGC

Product: OmpA/MotB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MSSKQTLALALCFAITGCAQTPKNDADGGSWWPFGSSDKVAAKEPAPAPAPLKPAATAPVAKAESSSPWYWPFGSDDSAA
AKPEVKAEAKPEAKPVEVAKAEADKGGKWWWPFGGKEQDTAKVVPMPDPKVTQAWLDDYEPRLRTAIKDSNLQLERRENV
LVVTAPVEGSFNPDRPAMLLPVTLGPFTRVAKILEADPKTAVLVLGHSDTTGAAPANVKLSQERAQAVAAIFRLSGLQRD
RLMLRGMGSEAPRAANDSVEGRALNRRVELLVTPQNTMVALLSKYNMPAPKPVTMVAAQDVKPAAKPVTPAPAAKKAAVP
ATKKAPAKKAAAKAPAKKAPAKKTAPAKAAATDKKVAATDTTKK

Sequences:

>Translated_364_residues
MSSKQTLALALCFAITGCAQTPKNDADGGSWWPFGSSDKVAAKEPAPAPAPLKPAATAPVAKAESSSPWYWPFGSDDSAA
AKPEVKAEAKPEAKPVEVAKAEADKGGKWWWPFGGKEQDTAKVVPMPDPKVTQAWLDDYEPRLRTAIKDSNLQLERRENV
LVVTAPVEGSFNPDRPAMLLPVTLGPFTRVAKILEADPKTAVLVLGHSDTTGAAPANVKLSQERAQAVAAIFRLSGLQRD
RLMLRGMGSEAPRAANDSVEGRALNRRVELLVTPQNTMVALLSKYNMPAPKPVTMVAAQDVKPAAKPVTPAPAAKKAAVP
ATKKAPAKKAAAKAPAKKAPAKKTAPAKAAATDKKVAATDTTKK
>Mature_363_residues
SSKQTLALALCFAITGCAQTPKNDADGGSWWPFGSSDKVAAKEPAPAPAPLKPAATAPVAKAESSSPWYWPFGSDDSAAA
KPEVKAEAKPEAKPVEVAKAEADKGGKWWWPFGGKEQDTAKVVPMPDPKVTQAWLDDYEPRLRTAIKDSNLQLERRENVL
VVTAPVEGSFNPDRPAMLLPVTLGPFTRVAKILEADPKTAVLVLGHSDTTGAAPANVKLSQERAQAVAAIFRLSGLQRDR
LMLRGMGSEAPRAANDSVEGRALNRRVELLVTPQNTMVALLSKYNMPAPKPVTMVAAQDVKPAAKPVTPAPAAKKAAVPA
TKKAPAKKAAAKAPAKKAPAKKTAPAKAAATDKKVAATDTTKK

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential). Cell inner membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=140, Percent_Identity=34.2857142857143, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 38334; Mature: 38203

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00758 ARGE_DAPE_CPG2_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKQTLALALCFAITGCAQTPKNDADGGSWWPFGSSDKVAAKEPAPAPAPLKPAATAPV
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AKAESSSPWYWPFGSDDSAAAKPEVKAEAKPEAKPVEVAKAEADKGGKWWWPFGGKEQDT
CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCC
AKVVPMPDPKVTQAWLDDYEPRLRTAIKDSNLQLERRENVLVVTAPVEGSFNPDRPAMLL
EEEECCCCCHHHHHHHHCCCHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCCCCCCEEE
PVTLGPFTRVAKILEADPKTAVLVLGHSDTTGAAPANVKLSQERAQAVAAIFRLSGLQRD
EECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHH
RLMLRGMGSEAPRAANDSVEGRALNRRVELLVTPQNTMVALLSKYNMPAPKPVTMVAAQD
HHHHHCCCCCCCCCCCCCCCCCEECCEEEEEECCCHHHHHHHHHCCCCCCCCEEEEEECC
VKPAAKPVTPAPAAKKAAVPATKKAPAKKAAAKAPAKKAPAKKTAPAKAAATDKKVAATD
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCCCCCCCCHHHCCCCCEECCC
TTKK
CCCC
>Mature Secondary Structure 
SSKQTLALALCFAITGCAQTPKNDADGGSWWPFGSSDKVAAKEPAPAPAPLKPAATAPV
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AKAESSSPWYWPFGSDDSAAAKPEVKAEAKPEAKPVEVAKAEADKGGKWWWPFGGKEQDT
CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCC
AKVVPMPDPKVTQAWLDDYEPRLRTAIKDSNLQLERRENVLVVTAPVEGSFNPDRPAMLL
EEEECCCCCHHHHHHHHCCCHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCCCCCCEEE
PVTLGPFTRVAKILEADPKTAVLVLGHSDTTGAAPANVKLSQERAQAVAAIFRLSGLQRD
EECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHH
RLMLRGMGSEAPRAANDSVEGRALNRRVELLVTPQNTMVALLSKYNMPAPKPVTMVAAQD
HHHHHCCCCCCCCCCCCCCCCCEECCEEEEEECCCHHHHHHHHHCCCCCCCCEEEEEECC
VKPAAKPVTPAPAAKKAAVPATKKAPAKKAAAKAPAKKAPAKKTAPAKAAATDKKVAATD
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCCCCCCCCHHHCCCCCEECCC
TTKK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2180922 [H]