Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is dinG [H]

Identifier: 77457452

GI number: 77457452

Start: 1394936

End: 1397080

Strand: Direct

Name: dinG [H]

Synonym: Pfl01_1225

Alternate gene names: 77457452

Gene position: 1394936-1397080 (Clockwise)

Preceding gene: 77457450

Following gene: 77457453

Centisome position: 21.67

GC content: 63.5

Gene sequence:

>2145_bases
ATGATCAGCACTGAACTCAAAACCACGATCCAGGGCGCCTACTCGCGTTTTCTAGAGGCCAAGAGCCTCAAGCCGCGTTA
CGGCCAGCGCCTGATGATCGCTGAAGTCGCCAAGGTCCTCGGTGATATCGACACCGACGACGAAGGCCGGCGCAGTGGCG
ACCCCGCGATTGTCGCGGTGGAAGCCGGCACCGGTACCGGCAAGACCGTGGCCTACAGCCTGGCGGCGATCCCGACCGCC
AAACTGGCCGGCAAACGCCTGGTGATCGCCACCGCCACCGTCGCCCTGCAAGAGCAGATCGTCTACAAGGATTTGCCCGA
CCTGATGCGCAACAGCGGGCTGAACTTCAGCTTCGCCCTGGCCAAGGGCCGTGGCCGCTACATGTGCCTGTCCAAGCTCG
ACATGCTGTTGCAGGAAGGCCATGCGCAGACCGCCACCGCGCAGCTGTTCGAAGAAGAAGGCTTCAAGATCGAGGTCGAT
GAGGCCAGCCAGAAGCTGTTCACCAGCATGATCGAGAAGCTCGCCGGCAATAAATGGGACGGCGACCGTGACAGTTGGCC
CAACGCGCTGGAAGACGCCGACTGGGCGCGCCTGACCACCGATCACAGCCAGTGCACCAACCGTCATTGCCCGAATTTCG
GCCAGTGCGCCTTCTATAAGGCCCGCGAAGGCATGGGCAAGGTCGACGTGATCGTCACCAACCACGACATGGTGCTGGCC
GACCTGGCGCTGGGTGGCGGGGCCGTGTTGCCGGATCCGCGCGACACCATTTATGTGTTCGACGAAGGCCACCACCTGCC
GGACAAGGCCATCGGCCACTTCGCTCATTACACGCGCCTGCGTTCCACTGCCGACTGGCTGGAAACCACCGCCAAGAACC
TCACCAAACTGCTGGCCCAGCACCCGTTGCCGGGCGACCTCGGCAAGCTGATCGAGCAGGTGCCGGAGCTGGCGCGGGAG
ATCAAGACCCAGCAGCAGTTCATGTTTACCGCCTGCGAGCAGGTCGCCGATTTCAAGCCCGGCGAAGACGTCGAAGGCCG
CGAGCGCCCGCGTCATCGCTTCATCGGCGGGGTGATTCCGGAACACATGCGCGAGATGGGCATCGAGCTGAAAAAAGGCT
TCGCCCGCCTCAATGACCTGTTTACCCGCCTGACCGATCTGCTCAAGGAAAGCATGGACGGCGAGGTCAACATCGGTATC
GCCAGCAATCAGGCCGAAGAATGGTATCCACTGTTCGGCAGCCTGTTGTCCCGTGCTTCCGGCAACTGGGAGCTGTGGAC
CGCGTTCACCGCCGAAGACCCCGAAGACAACCCGCCGATGGCCCGCTGGCTGACCCTGGCCGAAAGCGGTTCGCTGTTCG
ACATCGAGGTCAACGCCAGCCCGATCCTTGCCGCCGAAACCCTGCGCCGCAGCCTGTGGAACGTGGCCTATGGCTGTCTG
GTGACCTCGGCGACCTTGACCGCACTCGGCACCTTCGACCGTTTCCGCATGCGTGCCGGTCTGCCGAAAAAAGCCGTCAC
CGCCGTGGTGCCGAGTCCGTTCCATCACGCCGATGCCGGTGTGTTGCGGGTGCCGGACCTGAAGGCCGATCCGCGCGACG
CCGCCGCCCACACCGCCGCGATCATCCGTGATCTGCCGGAACTGGTCGAAGGCTCGCGCGGCAGTCTGGTGCTGTTCTCG
TCGCGCAAACAGATGCAGGACGTGTTCGACGGCCTCGACCGCGACTGGCGCAAGCAAGTGTTCATTCAAGGCAACCTGTC
GAAACAGGAAACCCTGAACAAGCACAAGGCGCGGGTCGATGGCGGCGATTCCAGCGTGCTGTTCGGCCTCGCCAGTTTTG
CCGAAGGCGTGGACTTGCCGGGCGCCTACTGCGAGCACGTGGTGATCGCCAAGATCCCGTTCTCGGTGCCGGACGATCCG
GTCGAAGCCGCACTGTCGGAATGGATCGAAGCCCGGGGCGGCAATCCGTTCATGGAAATCTCGGTGCCCGACGCCTCGCT
GAAGCTGGTCCAGGCCTGCGGCCGTCTGCTGCGCACCGAAGAAGACCGCGGCACCATCACCTTGCTGGATCGGCGGCTGG
TCACCCAGCGCTACGGCAAGGCGATCCTCAATGCGTTGCCTCCTTTCCGTCGTGAAATATCCTGA

Upstream 100 bases:

>100_bases
TTGGGGTACTCCGATCTGCGCAGGATTGATTCGCGGGGTATGATAGCCCCCCATCCGAACCACTGAAAATTTATCCAGCG
TTTTTTGCGCCCGACATTCA

Downstream 100 bases:

>100_bases
GACATCGGTGGGCAGTTTTGCCCGCCGCGCTGTCTATCTCTCTGTCACTGCTTTTCCATTGGCCCTTGCGGGTCGTTAGG
GAGAATTCCGTTCTCATGAT

Product: ATP-dependent DNA helicase DinG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 714; Mature: 714

Protein sequence:

>714_residues
MISTELKTTIQGAYSRFLEAKSLKPRYGQRLMIAEVAKVLGDIDTDDEGRRSGDPAIVAVEAGTGTGKTVAYSLAAIPTA
KLAGKRLVIATATVALQEQIVYKDLPDLMRNSGLNFSFALAKGRGRYMCLSKLDMLLQEGHAQTATAQLFEEEGFKIEVD
EASQKLFTSMIEKLAGNKWDGDRDSWPNALEDADWARLTTDHSQCTNRHCPNFGQCAFYKAREGMGKVDVIVTNHDMVLA
DLALGGGAVLPDPRDTIYVFDEGHHLPDKAIGHFAHYTRLRSTADWLETTAKNLTKLLAQHPLPGDLGKLIEQVPELARE
IKTQQQFMFTACEQVADFKPGEDVEGRERPRHRFIGGVIPEHMREMGIELKKGFARLNDLFTRLTDLLKESMDGEVNIGI
ASNQAEEWYPLFGSLLSRASGNWELWTAFTAEDPEDNPPMARWLTLAESGSLFDIEVNASPILAAETLRRSLWNVAYGCL
VTSATLTALGTFDRFRMRAGLPKKAVTAVVPSPFHHADAGVLRVPDLKADPRDAAAHTAAIIRDLPELVEGSRGSLVLFS
SRKQMQDVFDGLDRDWRKQVFIQGNLSKQETLNKHKARVDGGDSSVLFGLASFAEGVDLPGAYCEHVVIAKIPFSVPDDP
VEAALSEWIEARGGNPFMEISVPDASLKLVQACGRLLRTEEDRGTITLLDRRLVTQRYGKAILNALPPFRREIS

Sequences:

>Translated_714_residues
MISTELKTTIQGAYSRFLEAKSLKPRYGQRLMIAEVAKVLGDIDTDDEGRRSGDPAIVAVEAGTGTGKTVAYSLAAIPTA
KLAGKRLVIATATVALQEQIVYKDLPDLMRNSGLNFSFALAKGRGRYMCLSKLDMLLQEGHAQTATAQLFEEEGFKIEVD
EASQKLFTSMIEKLAGNKWDGDRDSWPNALEDADWARLTTDHSQCTNRHCPNFGQCAFYKAREGMGKVDVIVTNHDMVLA
DLALGGGAVLPDPRDTIYVFDEGHHLPDKAIGHFAHYTRLRSTADWLETTAKNLTKLLAQHPLPGDLGKLIEQVPELARE
IKTQQQFMFTACEQVADFKPGEDVEGRERPRHRFIGGVIPEHMREMGIELKKGFARLNDLFTRLTDLLKESMDGEVNIGI
ASNQAEEWYPLFGSLLSRASGNWELWTAFTAEDPEDNPPMARWLTLAESGSLFDIEVNASPILAAETLRRSLWNVAYGCL
VTSATLTALGTFDRFRMRAGLPKKAVTAVVPSPFHHADAGVLRVPDLKADPRDAAAHTAAIIRDLPELVEGSRGSLVLFS
SRKQMQDVFDGLDRDWRKQVFIQGNLSKQETLNKHKARVDGGDSSVLFGLASFAEGVDLPGAYCEHVVIAKIPFSVPDDP
VEAALSEWIEARGGNPFMEISVPDASLKLVQACGRLLRTEEDRGTITLLDRRLVTQRYGKAILNALPPFRREIS
>Mature_714_residues
MISTELKTTIQGAYSRFLEAKSLKPRYGQRLMIAEVAKVLGDIDTDDEGRRSGDPAIVAVEAGTGTGKTVAYSLAAIPTA
KLAGKRLVIATATVALQEQIVYKDLPDLMRNSGLNFSFALAKGRGRYMCLSKLDMLLQEGHAQTATAQLFEEEGFKIEVD
EASQKLFTSMIEKLAGNKWDGDRDSWPNALEDADWARLTTDHSQCTNRHCPNFGQCAFYKAREGMGKVDVIVTNHDMVLA
DLALGGGAVLPDPRDTIYVFDEGHHLPDKAIGHFAHYTRLRSTADWLETTAKNLTKLLAQHPLPGDLGKLIEQVPELARE
IKTQQQFMFTACEQVADFKPGEDVEGRERPRHRFIGGVIPEHMREMGIELKKGFARLNDLFTRLTDLLKESMDGEVNIGI
ASNQAEEWYPLFGSLLSRASGNWELWTAFTAEDPEDNPPMARWLTLAESGSLFDIEVNASPILAAETLRRSLWNVAYGCL
VTSATLTALGTFDRFRMRAGLPKKAVTAVVPSPFHHADAGVLRVPDLKADPRDAAAHTAAIIRDLPELVEGSRGSLVLFS
SRKQMQDVFDGLDRDWRKQVFIQGNLSKQETLNKHKARVDGGDSSVLFGLASFAEGVDLPGAYCEHVVIAKIPFSVPDDP
VEAALSEWIEARGGNPFMEISVPDASLKLVQACGRLLRTEEDRGTITLLDRRLVTQRYGKAILNALPPFRREIS

Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1787018, Length=731, Percent_Identity=32.6949384404925, Blast_Score=320, Evalue=2e-88,
Organism=Escherichia coli, GI1788110, Length=700, Percent_Identity=28.4285714285714, Blast_Score=219, Evalue=6e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650 [H]

Pfam domain/function: PF06733 DEAD_2 [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 78845; Mature: 78845

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISTELKTTIQGAYSRFLEAKSLKPRYGQRLMIAEVAKVLGDIDTDDEGRRSGDPAIVAV
CCCCHHHHHHHHHHHHHHHHHCCCCHHCCEEHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
EAGTGTGKTVAYSLAAIPTAKLAGKRLVIATATVALQEQIVYKDLPDLMRNSGLNFSFAL
ECCCCCCCHHEEHHHHCCHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
AKGRGRYMCLSKLDMLLQEGHAQTATAQLFEEEGFKIEVDEASQKLFTSMIEKLAGNKWD
ECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCCCC
GDRDSWPNALEDADWARLTTDHSQCTNRHCPNFGQCAFYKAREGMGKVDVIVTNHDMVLA
CCCCCCCCHHCCCCHHHCCCCHHHHHCCCCCCCCCEEHHHHHCCCCCEEEEEECCCEEEE
DLALGGGAVLPDPRDTIYVFDEGHHLPDKAIGHFAHYTRLRSTADWLETTAKNLTKLLAQ
EHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HPLPGDLGKLIEQVPELAREIKTQQQFMFTACEQVADFKPGEDVEGRERPRHRFIGGVIP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCH
EHMREMGIELKKGFARLNDLFTRLTDLLKESMDGEVNIGIASNQAEEWYPLFGSLLSRAS
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCC
GNWELWTAFTAEDPEDNPPMARWLTLAESGSLFDIEVNASPILAAETLRRSLWNVAYGCL
CCEEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
VTSATLTALGTFDRFRMRAGLPKKAVTAVVPSPFHHADAGVLRVPDLKADPRDAAAHTAA
HHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCCCCCCCEEECCCCCCCCCHHHHHHHH
IIRDLPELVEGSRGSLVLFSSRKQMQDVFDGLDRDWRKQVFIQGNLSKQETLNKHKARVD
HHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCHHHHHEEEEECCCCHHHHHHHHHHHCC
GGDSSVLFGLASFAEGVDLPGAYCEHVVIAKIPFSVPDDPVEAALSEWIEARGGNPFMEI
CCCCHHHHHHHHHHCCCCCCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEE
SVPDASLKLVQACGRLLRTEEDRGTITLLDRRLVTQRYGKAILNALPPFRREIS
ECCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHCC
>Mature Secondary Structure
MISTELKTTIQGAYSRFLEAKSLKPRYGQRLMIAEVAKVLGDIDTDDEGRRSGDPAIVAV
CCCCHHHHHHHHHHHHHHHHHCCCCHHCCEEHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
EAGTGTGKTVAYSLAAIPTAKLAGKRLVIATATVALQEQIVYKDLPDLMRNSGLNFSFAL
ECCCCCCCHHEEHHHHCCHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
AKGRGRYMCLSKLDMLLQEGHAQTATAQLFEEEGFKIEVDEASQKLFTSMIEKLAGNKWD
ECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCCCC
GDRDSWPNALEDADWARLTTDHSQCTNRHCPNFGQCAFYKAREGMGKVDVIVTNHDMVLA
CCCCCCCCHHCCCCHHHCCCCHHHHHCCCCCCCCCEEHHHHHCCCCCEEEEEECCCEEEE
DLALGGGAVLPDPRDTIYVFDEGHHLPDKAIGHFAHYTRLRSTADWLETTAKNLTKLLAQ
EHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HPLPGDLGKLIEQVPELAREIKTQQQFMFTACEQVADFKPGEDVEGRERPRHRFIGGVIP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCH
EHMREMGIELKKGFARLNDLFTRLTDLLKESMDGEVNIGIASNQAEEWYPLFGSLLSRAS
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCC
GNWELWTAFTAEDPEDNPPMARWLTLAESGSLFDIEVNASPILAAETLRRSLWNVAYGCL
CCEEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
VTSATLTALGTFDRFRMRAGLPKKAVTAVVPSPFHHADAGVLRVPDLKADPRDAAAHTAA
HHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCCCCCCCEEECCCCCCCCCHHHHHHHH
IIRDLPELVEGSRGSLVLFSSRKQMQDVFDGLDRDWRKQVFIQGNLSKQETLNKHKARVD
HHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCHHHHHEEEEECCCCHHHHHHHHHHHCC
GGDSSVLFGLASFAEGVDLPGAYCEHVVIAKIPFSVPDDPVEAALSEWIEARGGNPFMEI
CCCCHHHHHHHHHHCCCCCCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEE
SVPDASLKLVQACGRLLRTEEDRGTITLLDRRLVTQRYGKAILNALPPFRREIS
ECCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8396546; 8385320 [H]