Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77457397

Identifier: 77457397

GI number: 77457397

Start: 1343031

End: 1344233

Strand: Direct

Name: 77457397

Synonym: Pfl01_1170

Alternate gene names: NA

Gene position: 1343031-1344233 (Clockwise)

Preceding gene: 77457396

Following gene: 77457398

Centisome position: 20.86

GC content: 57.86

Gene sequence:

>1203_bases
GTGGATTATCCGAAAAGCGTTCCCGGCTCAGGCCTGGAGAATGGCAAGTTCGTCGATGAAGACCCGATTGCCGGAAAACC
GGGATCGTTGATCCCGGCCAGTTGGGGCAACAGTGTGACGCAGGAGATTCTCAACGCGATCACGGCCGCCGGCCTGACGC
CGGATGAGGAGCAGACCGATCAACTGGCACAGGCCATTCGGCAACTGGCCAAGCCCGATCCGCTGCAGCAGTTTCCTGTG
CAGGTGTATCGCAAGAATCTGTTGATCAATGGCGGATTCAATATCTGGCAACGCGGCACGACCAATCAGGCGCCGAACAT
CGGTGGGTATGTAGCGGATCGTTTCCGGTGCGACTGGAACGGCAACGCAGGTGTCAGCATTTCGCGCCAGGATTTTCCCC
TCGGTCAAACGGAAGTCGTGGGTGAACCCGCTTATTTCCTGCGCTGGCAGCAGGCCACCGCAGGCACGGGAGCAACGGTG
CATAAAGTCGCCCAGAGCATTGAATCGGTGAGGACTCTGGCCGGGCGAACGGCTACGGTCAGCTTCTGGGCGCGATCCGA
TGCGACGCGTCCTTTGCGCGTCACGATTGCTCAGCAGTTCGGAACGGGCGGTTCGGAGGGTGTGGTGAAGGTTGTCGACG
TCTTTCAACTGAGTACGTCGTGGAAGAAATACAGCGCAACGTTTCAGGTGCCAACCATCGCCGGGAAAATGCTGGGCGTG
AATGACTGCCTGACCTTGTCGTTCGATCTGCCGCTCAACGTGTTGCAGACCGTCGATCTGGCACAGATGCAATTGGAGGA
GGGGCCGGTTGCAACACCGTTTGAATACCGTCCAGCGGCGGAAGAGTTGACTCTCTGTCAGCGCTATTTCGAAAAATCTT
TTGTAAACCGTTTGCCGATCCGTTCGAACAACGGTCCAGGAACCTGTATCGCCACCTTTTCCCAAGTAGCGGCAGCCAAT
TCCGGCCAATATGGAATGTGCATCGATATGCAGGTGCCCAAGCGAGTTCAGCCAACGGTCGTGACGTATTGCCCTGGTGA
GGCGAGCAATCAAGTCTGGCATTCATCGCTTGCGAAGGCCTGCACAGGAACCATCCTGCAAAGTGTGAGCGAGCGAGGGT
TTGCGCTTGCCACCGTGACGCCCGTAGGCAGCTTTCCCGGGCAGGCATTGCAGGTCGATTGGACCGCGGACGCGGAAATC
TAG

Upstream 100 bases:

>100_bases
AATTTCCGGATGCCCAGGCTCGCCCTGTAGAGCCCGACTGGCTTGAAGGCTTGCTGCGGTCGAACGGCTGAACCGTTGAC
CCGATCAATGAGGAATCAAA

Downstream 100 bases:

>100_bases
GGGACAAGTCCATGAGTTATCAGCTCACATCGTATGGCGTTCTGCGCCTGAGTGATTCAGCGTTTATTCCACAGGATCCC
GTTAATCGGGACTGGCTCGA

Product: carbohydrate-binding CenC-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MDYPKSVPGSGLENGKFVDEDPIAGKPGSLIPASWGNSVTQEILNAITAAGLTPDEEQTDQLAQAIRQLAKPDPLQQFPV
QVYRKNLLINGGFNIWQRGTTNQAPNIGGYVADRFRCDWNGNAGVSISRQDFPLGQTEVVGEPAYFLRWQQATAGTGATV
HKVAQSIESVRTLAGRTATVSFWARSDATRPLRVTIAQQFGTGGSEGVVKVVDVFQLSTSWKKYSATFQVPTIAGKMLGV
NDCLTLSFDLPLNVLQTVDLAQMQLEEGPVATPFEYRPAAEELTLCQRYFEKSFVNRLPIRSNNGPGTCIATFSQVAAAN
SGQYGMCIDMQVPKRVQPTVVTYCPGEASNQVWHSSLAKACTGTILQSVSERGFALATVTPVGSFPGQALQVDWTADAEI

Sequences:

>Translated_400_residues
MDYPKSVPGSGLENGKFVDEDPIAGKPGSLIPASWGNSVTQEILNAITAAGLTPDEEQTDQLAQAIRQLAKPDPLQQFPV
QVYRKNLLINGGFNIWQRGTTNQAPNIGGYVADRFRCDWNGNAGVSISRQDFPLGQTEVVGEPAYFLRWQQATAGTGATV
HKVAQSIESVRTLAGRTATVSFWARSDATRPLRVTIAQQFGTGGSEGVVKVVDVFQLSTSWKKYSATFQVPTIAGKMLGV
NDCLTLSFDLPLNVLQTVDLAQMQLEEGPVATPFEYRPAAEELTLCQRYFEKSFVNRLPIRSNNGPGTCIATFSQVAAAN
SGQYGMCIDMQVPKRVQPTVVTYCPGEASNQVWHSSLAKACTGTILQSVSERGFALATVTPVGSFPGQALQVDWTADAEI
>Mature_400_residues
MDYPKSVPGSGLENGKFVDEDPIAGKPGSLIPASWGNSVTQEILNAITAAGLTPDEEQTDQLAQAIRQLAKPDPLQQFPV
QVYRKNLLINGGFNIWQRGTTNQAPNIGGYVADRFRCDWNGNAGVSISRQDFPLGQTEVVGEPAYFLRWQQATAGTGATV
HKVAQSIESVRTLAGRTATVSFWARSDATRPLRVTIAQQFGTGGSEGVVKVVDVFQLSTSWKKYSATFQVPTIAGKMLGV
NDCLTLSFDLPLNVLQTVDLAQMQLEEGPVATPFEYRPAAEELTLCQRYFEKSFVNRLPIRSNNGPGTCIATFSQVAAAN
SGQYGMCIDMQVPKRVQPTVVTYCPGEASNQVWHSSLAKACTGTILQSVSERGFALATVTPVGSFPGQALQVDWTADAEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43172; Mature: 43172

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYPKSVPGSGLENGKFVDEDPIAGKPGSLIPASWGNSVTQEILNAITAAGLTPDEEQTD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH
QLAQAIRQLAKPDPLQQFPVQVYRKNLLINGGFNIWQRGTTNQAPNIGGYVADRFRCDWN
HHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCEEECCCCCCCCCCCCEEEEEEEECCC
GNAGVSISRQDFPLGQTEVVGEPAYFLRWQQATAGTGATVHKVAQSIESVRTLAGRTATV
CCCCEEECCCCCCCCCHHCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEE
SFWARSDATRPLRVTIAQQFGTGGSEGVVKVVDVFQLSTSWKKYSATFQVPTIAGKMLGV
EEEECCCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHHCCHHHHEEEEECHHHHHHHCCC
NDCLTLSFDLPLNVLQTVDLAQMQLEEGPVATPFEYRPAAEELTLCQRYFEKSFVNRLPI
CCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
RSNNGPGTCIATFSQVAAANSGQYGMCIDMQVPKRVQPTVVTYCPGEASNQVWHSSLAKA
CCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHH
CTGTILQSVSERGFALATVTPVGSFPGQALQVDWTADAEI
HHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MDYPKSVPGSGLENGKFVDEDPIAGKPGSLIPASWGNSVTQEILNAITAAGLTPDEEQTD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH
QLAQAIRQLAKPDPLQQFPVQVYRKNLLINGGFNIWQRGTTNQAPNIGGYVADRFRCDWN
HHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCEEECCCCCCCCCCCCEEEEEEEECCC
GNAGVSISRQDFPLGQTEVVGEPAYFLRWQQATAGTGATVHKVAQSIESVRTLAGRTATV
CCCCEEECCCCCCCCCHHCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEE
SFWARSDATRPLRVTIAQQFGTGGSEGVVKVVDVFQLSTSWKKYSATFQVPTIAGKMLGV
EEEECCCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHHCCHHHHEEEEECHHHHHHHCCC
NDCLTLSFDLPLNVLQTVDLAQMQLEEGPVATPFEYRPAAEELTLCQRYFEKSFVNRLPI
CCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
RSNNGPGTCIATFSQVAAANSGQYGMCIDMQVPKRVQPTVVTYCPGEASNQVWHSSLAKA
CCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHH
CTGTILQSVSERGFALATVTPVGSFPGQALQVDWTADAEI
HHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA