Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
---|---|
Accession | NC_007492 |
Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is yeiG [H]
Identifier: 77457353
GI number: 77457353
Start: 1303387
End: 1304232
Strand: Direct
Name: yeiG [H]
Synonym: Pfl01_1126
Alternate gene names: 77457353
Gene position: 1303387-1304232 (Clockwise)
Preceding gene: 77457352
Following gene: 77457354
Centisome position: 20.24
GC content: 59.69
Gene sequence:
>846_bases ATGAGTCTGGAAAACATCTCCTGTCAGAAAAGTTTCGGCGGATGGCACAAGCGCTATCGCCATCGTTCCGAAGTACTGGG TTGCGACATGGTGTTCGCCGTGTACCTGCCGCCGCAGGCAGAGCAGGGCGGCAAGTTGCCGGTGCTGTACTGGTTGTCGG GCCTGACCTGCACGGACGAGAACTTCATGCAGAAGGCCGGTGCCATGCGCATGGCGGCTGAATTGGGGCTGATTATCGTG GCCCCGGACACCAGCCCACGCGGCCCGGATGTACCGGGCGATCCGGATGGTGCGTGGGATTTCGGCCTCGGTGCCGGCTT CTATCTGAATGCCACGCAGGAACCTTGGTCGCGGCACTATCGGATGCATGACTATGTCGTGCAGGAATTGCCTTCACTGG TTGAAGCGCATTTCCCGGCGTCGGACAAACGCAGCATCAGCGGCCACTCGATGGGCGGTCACGGTGCATTGGTCTGTGCC TTGCGCAATCCAGGGCGTTATCAGTCAGTATCAGCGTTCTCTCCGATCAATAATCCGATGGATTGCCCGTGGGGCCAGAA AGCGTTCTCCCGCTATCTGGGCGAAGACCGTTCGAAATGGCGCGAGTGGGATGCCTGTGCGCTGATCGCCGAGACGGACG AAAAGCTGCCATTGCTGGTCGATCAGGGTGATCGCGACGACTTCCTCGCCACCCAGCTCAAACCCGAGGCCCTGCAACAA GCGGCAAAACAGGCGGGGCATCCGCTGACGTTGCGCCTGCAACCGGGCTACGATCACAGCTATTTCTTCATCGCCAGCTT CATTGACGACCACTTGCAGCATCACGCGCGCGCTCTGAAGAGTTAA
Upstream 100 bases:
>100_bases CTGATGCACGAAGGCAAGAGCATCCGTACCGTCATTCATTTCTGATCAATCACGATGCCACGACTGCCGGTGTGCAGCCG TGGCTGCGTAGGAGTCCTAC
Downstream 100 bases:
>100_bases TGCAGGTAGAATCACGCCCTGACAAAATTCGGGGCGTTTTTTTATGCGTATTGGCCACGGCTATGATGTGCACCGTTTCG CTGAAGGCGATTTCATTACT
Product: putative esterase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSLENISCQKSFGGWHKRYRHRSEVLGCDMVFAVYLPPQAEQGGKLPVLYWLSGLTCTDENFMQKAGAMRMAAELGLIIV APDTSPRGPDVPGDPDGAWDFGLGAGFYLNATQEPWSRHYRMHDYVVQELPSLVEAHFPASDKRSISGHSMGGHGALVCA LRNPGRYQSVSAFSPINNPMDCPWGQKAFSRYLGEDRSKWREWDACALIAETDEKLPLLVDQGDRDDFLATQLKPEALQQ AAKQAGHPLTLRLQPGYDHSYFFIASFIDDHLQHHARALKS
Sequences:
>Translated_281_residues MSLENISCQKSFGGWHKRYRHRSEVLGCDMVFAVYLPPQAEQGGKLPVLYWLSGLTCTDENFMQKAGAMRMAAELGLIIV APDTSPRGPDVPGDPDGAWDFGLGAGFYLNATQEPWSRHYRMHDYVVQELPSLVEAHFPASDKRSISGHSMGGHGALVCA LRNPGRYQSVSAFSPINNPMDCPWGQKAFSRYLGEDRSKWREWDACALIAETDEKLPLLVDQGDRDDFLATQLKPEALQQ AAKQAGHPLTLRLQPGYDHSYFFIASFIDDHLQHHARALKS >Mature_280_residues SLENISCQKSFGGWHKRYRHRSEVLGCDMVFAVYLPPQAEQGGKLPVLYWLSGLTCTDENFMQKAGAMRMAAELGLIIVA PDTSPRGPDVPGDPDGAWDFGLGAGFYLNATQEPWSRHYRMHDYVVQELPSLVEAHFPASDKRSISGHSMGGHGALVCAL RNPGRYQSVSAFSPINNPMDCPWGQKAFSRYLGEDRSKWREWDACALIAETDEKLPLLVDQGDRDDFLATQLKPEALQQA AKQAGHPLTLRLQPGYDHSYFFIASFIDDHLQHHARALKS
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=284, Percent_Identity=55.9859154929578, Blast_Score=332, Evalue=2e-91, Organism=Escherichia coli, GI1788477, Length=279, Percent_Identity=59.4982078853047, Blast_Score=342, Evalue=1e-95, Organism=Escherichia coli, GI1786551, Length=278, Percent_Identity=53.9568345323741, Blast_Score=310, Evalue=8e-86, Organism=Caenorhabditis elegans, GI17510185, Length=284, Percent_Identity=49.6478873239437, Blast_Score=275, Evalue=1e-74, Organism=Saccharomyces cerevisiae, GI6322393, Length=288, Percent_Identity=42.7083333333333, Blast_Score=235, Evalue=5e-63, Organism=Drosophila melanogaster, GI45551932, Length=286, Percent_Identity=54.5454545454545, Blast_Score=311, Evalue=3e-85, Organism=Drosophila melanogaster, GI24648347, Length=286, Percent_Identity=54.5454545454545, Blast_Score=310, Evalue=5e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 31376; Mature: 31245
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLENISCQKSFGGWHKRYRHRSEVLGCDMVFAVYLPPQAEQGGKLPVLYWLSGLTCTDE CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCH NFMQKAGAMRMAAELGLIIVAPDTSPRGPDVPGDPDGAWDFGLGAGFYLNATQEPWSRHY HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCEEECCCCCHHHHHH RMHDYVVQELPSLVEAHFPASDKRSISGHSMGGHGALVCALRNPGRYQSVSAFSPINNPM HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC DCPWGQKAFSRYLGEDRSKWREWDACALIAETDEKLPLLVDQGDRDDFLATQLKPEALQQ CCCCCHHHHHHHHCCHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCHHHHCCCHHHHHH AAKQAGHPLTLRLQPGYDHSYFFIASFIDDHLQHHARALKS HHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLENISCQKSFGGWHKRYRHRSEVLGCDMVFAVYLPPQAEQGGKLPVLYWLSGLTCTDE CCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCH NFMQKAGAMRMAAELGLIIVAPDTSPRGPDVPGDPDGAWDFGLGAGFYLNATQEPWSRHY HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCEEECCCCCHHHHHH RMHDYVVQELPSLVEAHFPASDKRSISGHSMGGHGALVCALRNPGRYQSVSAFSPINNPM HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC DCPWGQKAFSRYLGEDRSKWREWDACALIAETDEKLPLLVDQGDRDDFLATQLKPEALQQ CCCCCHHHHHHHHCCHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCHHHHCCCHHHHHH AAKQAGHPLTLRLQPGYDHSYFFIASFIDDHLQHHARALKS HHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA