Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is pyrG [H]
Identifier: 77457346
GI number: 77457346
Start: 1296127
End: 1297758
Strand: Direct
Name: pyrG [H]
Synonym: Pfl01_1119
Alternate gene names: 77457346
Gene position: 1296127-1297758 (Clockwise)
Preceding gene: 77457345
Following gene: 77457347
Centisome position: 20.13
GC content: 60.54
Gene sequence:
>1632_bases ATGACGCGCTACATATTCGTCACGGGCGGTGTTGTTTCTTCTTTGGGGAAAGGCATTGCATCGGCTTCATTGGCGGCCAT CCTGGAGGCGCGGGGGCTTAAGGTCACCATGCTGAAGCTGGATCCGTACATCAACGTCGACCCGGGCACCATGAGCCCGT TCCAGCACGGTGAAGTGTTCGTCACCCACGACGGCGCCGAGACCGACCTGGACCTGGGCCACTACGAGCGGTTCATCCGC ACGACCATGACCCAGAACAACAACTTCACCACCGGCCGTGTCTACGAGCACGTGCTGCGCAAAGAGCGCCGTGGTGACTA CCTGGGTGCAACCATCCAGGTGATTCCGCACATCACCGACGAAATCAAGCGTCGCATCATCAAGGGTGCCGGCGACGCCG ACGTGGCCCTGGTGGAAATCGGCGGTACTGTTGGCGACATCGAGTCGCAACCGTTCCTAGAAGCCATCCGCCAGCTGCGT GTGGAAGTCGGCTCCAAGCGCGCGATGCTGATGCACCTGACCCTGGTTCCGTACATCGCCACCGCTGGCGAGACCAAGAC CAAGCCGACCCAGCACTCCGTGAAGGAACTGCGTTCGATCGGCCTGCAGCCAGACGTCCTGATCTGCCGCTCCGACCATC CGGTGGATGTGTCCTCGCGTCGCAAGATCGCGCTGTTCACCAACGTTGAAGAGCGTGCGGTGATCTCCCTGGAAGACGTC GACACCATCTACAAGATCCCGGCCGTGCTGCACGCTCAGGGTCTGGACGATTTCGTCGTCGAGCGTTTCGGCCTGCAATG CAATGGCGCCGACCTGTCCGAGTGGGAAAAGGTCGTTGATGCCAAGCTCAATCCAGAGCACGAAGTCACCATCGCGATGG TCGGCAAGTACATGGAGCTGCTGGACGCCTACAAGTCGCTGATCGAAGCGATGAGTCACGCCGGCATCACCAACCGCACC AAGGTCAACCTGCGCTACATCGATTCCGAAGACATCGAAAACCAGGGCACTGCCCTGCTGGAAGGCGTCGACGCGATCCT CGTACCGGGCGGCTTCGGTCTGCGTGGCGTGGAAGGCAAGATCACCGCCGTTCAATACGCTCGCGAAAACAAGGTTCCAT ACCTGGGCATCTGCCTGGGCATGCAAGTGGCGGTCATCGAGTTCGCCCGTAACGTGCTGGGCTGGAAAGACGCCAACTCC ACCGAGTTCGATCGTGCCAGCGGCCATCCGGTTGTCGGTCTGATCACCGAGTGGGAAGACGCCACCGGTGCCGTTGAAGT GCGTACCGAAGCGTCCGACCTGGGCGGCACCATGCGCCTCGGCGCTCAGGAATGCCTGCTCGAAGCCGGCTCCAAGGTGC ACGACTGCTACGGCAAGGATGTGATTGTCGAGCGTCACCGTCACCGTTACGAAGTGAACAACAACCTGCTGCCGCAAATC ATCGAAGCCGGCCTGAAGATTTCCGGTCGCTCTTCCGATGCAGCGCTGGTTGAAGTGGTCGAAGCACCGGATCATCCATG GTTCGTCGCTTGCCAGTTCCACCCAGAGTTCACCTCGACGCCACGCGATGGCCATCCGCTGTTCAGCGGCTTCGTCAAAG CGGCATTGGCTCAACACCAGAAGAAGGCGTAA
Upstream 100 bases:
>100_bases AAAGGTGCACTGTGATTAATGCAGGTGATCGGGGGCTTCGGCCTTCCTTCGCTTTCCCCGGCGGCTCGGACCGCTTTAAC GCAGACTTCTAGGGTTTTTC
Downstream 100 bases:
>100_bases CCCCGATGGCACAGAAGATCATCCGCGTCGGCGACATCGAGATTGCCAACGACAAACCCATGGTGCTGTTCGGCGGCATG AACGTGCTGGAAAGCCGTGA
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 543; Mature: 542
Protein sequence:
>543_residues MTRYIFVTGGVVSSLGKGIASASLAAILEARGLKVTMLKLDPYINVDPGTMSPFQHGEVFVTHDGAETDLDLGHYERFIR TTMTQNNNFTTGRVYEHVLRKERRGDYLGATIQVIPHITDEIKRRIIKGAGDADVALVEIGGTVGDIESQPFLEAIRQLR VEVGSKRAMLMHLTLVPYIATAGETKTKPTQHSVKELRSIGLQPDVLICRSDHPVDVSSRRKIALFTNVEERAVISLEDV DTIYKIPAVLHAQGLDDFVVERFGLQCNGADLSEWEKVVDAKLNPEHEVTIAMVGKYMELLDAYKSLIEAMSHAGITNRT KVNLRYIDSEDIENQGTALLEGVDAILVPGGFGLRGVEGKITAVQYARENKVPYLGICLGMQVAVIEFARNVLGWKDANS TEFDRASGHPVVGLITEWEDATGAVEVRTEASDLGGTMRLGAQECLLEAGSKVHDCYGKDVIVERHRHRYEVNNNLLPQI IEAGLKISGRSSDAALVEVVEAPDHPWFVACQFHPEFTSTPRDGHPLFSGFVKAALAQHQKKA
Sequences:
>Translated_543_residues MTRYIFVTGGVVSSLGKGIASASLAAILEARGLKVTMLKLDPYINVDPGTMSPFQHGEVFVTHDGAETDLDLGHYERFIR TTMTQNNNFTTGRVYEHVLRKERRGDYLGATIQVIPHITDEIKRRIIKGAGDADVALVEIGGTVGDIESQPFLEAIRQLR VEVGSKRAMLMHLTLVPYIATAGETKTKPTQHSVKELRSIGLQPDVLICRSDHPVDVSSRRKIALFTNVEERAVISLEDV DTIYKIPAVLHAQGLDDFVVERFGLQCNGADLSEWEKVVDAKLNPEHEVTIAMVGKYMELLDAYKSLIEAMSHAGITNRT KVNLRYIDSEDIENQGTALLEGVDAILVPGGFGLRGVEGKITAVQYARENKVPYLGICLGMQVAVIEFARNVLGWKDANS TEFDRASGHPVVGLITEWEDATGAVEVRTEASDLGGTMRLGAQECLLEAGSKVHDCYGKDVIVERHRHRYEVNNNLLPQI IEAGLKISGRSSDAALVEVVEAPDHPWFVACQFHPEFTSTPRDGHPLFSGFVKAALAQHQKKA >Mature_542_residues TRYIFVTGGVVSSLGKGIASASLAAILEARGLKVTMLKLDPYINVDPGTMSPFQHGEVFVTHDGAETDLDLGHYERFIRT TMTQNNNFTTGRVYEHVLRKERRGDYLGATIQVIPHITDEIKRRIIKGAGDADVALVEIGGTVGDIESQPFLEAIRQLRV EVGSKRAMLMHLTLVPYIATAGETKTKPTQHSVKELRSIGLQPDVLICRSDHPVDVSSRRKIALFTNVEERAVISLEDVD TIYKIPAVLHAQGLDDFVVERFGLQCNGADLSEWEKVVDAKLNPEHEVTIAMVGKYMELLDAYKSLIEAMSHAGITNRTK VNLRYIDSEDIENQGTALLEGVDAILVPGGFGLRGVEGKITAVQYARENKVPYLGICLGMQVAVIEFARNVLGWKDANST EFDRASGHPVVGLITEWEDATGAVEVRTEASDLGGTMRLGAQECLLEAGSKVHDCYGKDVIVERHRHRYEVNNNLLPQII EAGLKISGRSSDAALVEVVEAPDHPWFVACQFHPEFTSTPRDGHPLFSGFVKAALAQHQKKA
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=560, Percent_Identity=44.8214285714286, Blast_Score=505, Evalue=1e-143, Organism=Homo sapiens, GI28559085, Length=557, Percent_Identity=43.2675044883303, Blast_Score=485, Evalue=1e-137, Organism=Homo sapiens, GI28559083, Length=557, Percent_Identity=43.2675044883303, Blast_Score=485, Evalue=1e-137, Organism=Homo sapiens, GI221316689, Length=557, Percent_Identity=43.2675044883303, Blast_Score=485, Evalue=1e-137, Organism=Escherichia coli, GI1789142, Length=542, Percent_Identity=69.7416974169742, Blast_Score=775, Evalue=0.0, Organism=Caenorhabditis elegans, GI25148299, Length=616, Percent_Identity=40.0974025974026, Blast_Score=434, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6319432, Length=569, Percent_Identity=40.597539543058, Blast_Score=446, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6322563, Length=570, Percent_Identity=40.5263157894737, Blast_Score=440, Evalue=1e-124, Organism=Drosophila melanogaster, GI24664469, Length=558, Percent_Identity=43.5483870967742, Blast_Score=467, Evalue=1e-131, Organism=Drosophila melanogaster, GI21357815, Length=503, Percent_Identity=42.3459244532803, Blast_Score=396, Evalue=1e-110,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 59699; Mature: 59568
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYIFVTGGVVSSLGKGIASASLAAILEARGLKVTMLKLDPYINVDPGTMSPFQHGEVF CCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCCEE VTHDGAETDLDLGHYERFIRTTMTQNNNFTTGRVYEHVLRKERRGDYLGATIQVIPHITD EEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHEEHHHHHH EIKRRIIKGAGDADVALVEIGGTVGDIESQPFLEAIRQLRVEVGSKRAMLMHLTLVPYIA HHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHH TAGETKTKPTQHSVKELRSIGLQPDVLICRSDHPVDVSSRRKIALFTNVEERAVISLEDV CCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEHHH DTIYKIPAVLHAQGLDDFVVERFGLQCNGADLSEWEKVVDAKLNPEHEVTIAMVGKYMEL HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEEHHHHHHHHHH LDAYKSLIEAMSHAGITNRTKVNLRYIDSEDIENQGTALLEGVDAILVPGGFGLRGVEGK HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCC ITAVQYARENKVPYLGICLGMQVAVIEFARNVLGWKDANSTEFDRASGHPVVGLITEWED EEEEEEHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCC ATGAVEVRTEASDLGGTMRLGAQECLLEAGSKVHDCYGKDVIVERHRHRYEVNNNLLPQI CCCCEEEEECHHHCCCHHHCCHHHHHHHCCCHHHHHCCCCHHHHHHHHHEECCCCHHHHH IEAGLKISGRSSDAALVEVVEAPDHPWFVACQFHPEFTSTPRDGHPLFSGFVKAALAQHQ HHCCCEECCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH KKA CCC >Mature Secondary Structure TRYIFVTGGVVSSLGKGIASASLAAILEARGLKVTMLKLDPYINVDPGTMSPFQHGEVF CEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCCEE VTHDGAETDLDLGHYERFIRTTMTQNNNFTTGRVYEHVLRKERRGDYLGATIQVIPHITD EEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHEEHHHHHH EIKRRIIKGAGDADVALVEIGGTVGDIESQPFLEAIRQLRVEVGSKRAMLMHLTLVPYIA HHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHH TAGETKTKPTQHSVKELRSIGLQPDVLICRSDHPVDVSSRRKIALFTNVEERAVISLEDV CCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEHHH DTIYKIPAVLHAQGLDDFVVERFGLQCNGADLSEWEKVVDAKLNPEHEVTIAMVGKYMEL HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEEHHHHHHHHHH LDAYKSLIEAMSHAGITNRTKVNLRYIDSEDIENQGTALLEGVDAILVPGGFGLRGVEGK HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCC ITAVQYARENKVPYLGICLGMQVAVIEFARNVLGWKDANSTEFDRASGHPVVGLITEWED EEEEEEHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCC ATGAVEVRTEASDLGGTMRLGAQECLLEAGSKVHDCYGKDVIVERHRHRYEVNNNLLPQI CCCCEEEEECHHHCCCHHHCCHHHHHHHCCCHHHHHCCCCHHHHHHHHHEECCCCHHHHH IEAGLKISGRSSDAALVEVVEAPDHPWFVACQFHPEFTSTPRDGHPLFSGFVKAALAQHQ HHCCCEECCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH KKA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA