Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is lpxA [H]
Identifier: 77457340
GI number: 77457340
Start: 1287145
End: 1287921
Strand: Direct
Name: lpxA [H]
Synonym: Pfl01_1113
Alternate gene names: 77457340
Gene position: 1287145-1287921 (Clockwise)
Preceding gene: 77457339
Following gene: 77457341
Centisome position: 19.99
GC content: 61.0
Gene sequence:
>777_bases ATGAGTTTGATTGACCCTCGCGCAATCATCGATCCATCGGCCGTCCTGGCCGATGGCGTCGAGGTCGGCCCGTGGTCGAT CATCGGTGCAGGTGTGGAAATCGGCGAGGGAACGGTCATCGGGCCACACGTGATCCTCAAAGGTCCGACCCGTATCGGCA AGCACAACCGCATCTACCAGTTTTCCTCGGTAGGCGAAGACACGCCGGACCTGAAATACAAGGGCGAAGAAACCCGCCTG GTGATCGGTGACCACAACGTCATCCGCGAAGGCGTGACGATTCATCGTGGCACCGTTCAGGATCGTTCCGAAACGACCCT GGGTGATCACAACCTGATCATGGCCTATGCCCACATCGGACATGACAGCGTCATCGGCAACCACTGCATCCTGGTCAACA ACACCGCGCTGGCCGGCCATGTGCACGTTGATGACTGGGCAATCCTGTCCGGTTTCACCCTGGTGCATCAGTATTGCCAC ATCGGCGCCCACAGCTTTTCCGGCATGGGCACGGCGATCGGCAAGGACGTTCCGGCGTTCGTCACCGTATTCGGCAACCC GGCCGAAGCGCGCAGCATGAACTTCGAAGGCATGCGTCGTCGTGGTTTCAGCGAAGACGCCATTCACGCCCTGCGCCGTG CGTACAAAACGGTGTATCGCCAGGGCCTGACCGTCGAGCAGGCGCTGGCCGAGCTGGCCGAGCCGTCTGCACAGTTCCCG GAAGTCGCGATGTTCCGTGACTCCATCCAGTCGTCGACCCGCGGCATCACCCGCTGA
Upstream 100 bases:
>100_bases TCATCAGTTGCAAGCGTCAGATCTGGAAGTTCGAATGCCAGGCTTCGGTCGATGGCAAACCGGTCTGCTCGGCTGAAATC ATCTGTGCGGAACGCAAGCT
Downstream 100 bases:
>100_bases CCATGGCCAATCTGCGTATTGCGCTGGTGGCGGGTGAGGCTTCCGGTGACATTCTGGGCGCCGGTCTCATGCGCGCCCTC AAGGCACAGCACCCTGCGGT
Product: UDP-N-acetylglucosamine acyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine acyltransferase [H]
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSLIDPRAIIDPSAVLADGVEVGPWSIIGAGVEIGEGTVIGPHVILKGPTRIGKHNRIYQFSSVGEDTPDLKYKGEETRL VIGDHNVIREGVTIHRGTVQDRSETTLGDHNLIMAYAHIGHDSVIGNHCILVNNTALAGHVHVDDWAILSGFTLVHQYCH IGAHSFSGMGTAIGKDVPAFVTVFGNPAEARSMNFEGMRRRGFSEDAIHALRRAYKTVYRQGLTVEQALAELAEPSAQFP EVAMFRDSIQSSTRGITR
Sequences:
>Translated_258_residues MSLIDPRAIIDPSAVLADGVEVGPWSIIGAGVEIGEGTVIGPHVILKGPTRIGKHNRIYQFSSVGEDTPDLKYKGEETRL VIGDHNVIREGVTIHRGTVQDRSETTLGDHNLIMAYAHIGHDSVIGNHCILVNNTALAGHVHVDDWAILSGFTLVHQYCH IGAHSFSGMGTAIGKDVPAFVTVFGNPAEARSMNFEGMRRRGFSEDAIHALRRAYKTVYRQGLTVEQALAELAEPSAQFP EVAMFRDSIQSSTRGITR >Mature_257_residues SLIDPRAIIDPSAVLADGVEVGPWSIIGAGVEIGEGTVIGPHVILKGPTRIGKHNRIYQFSSVGEDTPDLKYKGEETRLV IGDHNVIREGVTIHRGTVQDRSETTLGDHNLIMAYAHIGHDSVIGNHCILVNNTALAGHVHVDDWAILSGFTLVHQYCHI GAHSFSGMGTAIGKDVPAFVTVFGNPAEARSMNFEGMRRRGFSEDAIHALRRAYKTVYRQGLTVEQALAELAEPSAQFPE VAMFRDSIQSSTRGITR
Specific function: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell [H]
COG id: COG1043
COG function: function code M; Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family. LpxA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786378, Length=262, Percent_Identity=50.763358778626, Blast_Score=268, Evalue=2e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR010137 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: =2.3.1.129 [H]
Molecular weight: Translated: 28014; Mature: 27883
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIDPRAIIDPSAVLADGVEVGPWSIIGAGVEIGEGTVIGPHVILKGPTRIGKHNRIYQ CCCCCCCHHCCCHHHHHCCCCCCCCEEEECCEEECCCEEECCEEEEECCCCCCCCCCEEE FSSVGEDTPDLKYKGEETRLVIGDHNVIREGVTIHRGTVQDRSETTLGDHNLIMAYAHIG ECCCCCCCCCCEECCCCCEEEECCCHHHHCCCEEEECCCCCCCCCCCCCCCEEEEEEECC HDSVIGNHCILVNNTALAGHVHVDDWAILSGFTLVHQYCHIGAHSFSGMGTAIGKDVPAF CCCEECCEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEE VTVFGNPAEARSMNFEGMRRRGFSEDAIHALRRAYKTVYRQGLTVEQALAELAEPSAQFP EEEECCCHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC EVAMFRDSIQSSTRGITR HHHHHHHHHHHHHCCCCC >Mature Secondary Structure SLIDPRAIIDPSAVLADGVEVGPWSIIGAGVEIGEGTVIGPHVILKGPTRIGKHNRIYQ CCCCCCHHCCCHHHHHCCCCCCCCEEEECCEEECCCEEECCEEEEECCCCCCCCCCEEE FSSVGEDTPDLKYKGEETRLVIGDHNVIREGVTIHRGTVQDRSETTLGDHNLIMAYAHIG ECCCCCCCCCCEECCCCCEEEECCCHHHHCCCEEEECCCCCCCCCCCCCCCEEEEEEECC HDSVIGNHCILVNNTALAGHVHVDDWAILSGFTLVHQYCHIGAHSFSGMGTAIGKDVPAF CCCEECCEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEE VTVFGNPAEARSMNFEGMRRRGFSEDAIHALRRAYKTVYRQGLTVEQALAELAEPSAQFP EEEECCCHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC EVAMFRDSIQSSTRGITR HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA