Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is pyrH [H]

Identifier: 77457330

GI number: 77457330

Start: 1277062

End: 1277805

Strand: Direct

Name: pyrH [H]

Synonym: Pfl01_1103

Alternate gene names: 77457330

Gene position: 1277062-1277805 (Clockwise)

Preceding gene: 77457329

Following gene: 77457331

Centisome position: 19.84

GC content: 58.6

Gene sequence:

>744_bases
ATGGCTCAGCAGGGCAGTGGTTATCAGGCTCGCTATAAACGCATTCTACTCAAGCTTAGCGGCGAGGCCCTGATGGGCTC
GGAAGAGTTCGGGATCGATCCGAAAGTGCTGGATCGCATGGCGCTGGAAGTCGGCCAACTGGTCGGTATCGGCGTTCAGG
TCGGTCTGGTGATCGGTGGTGGCAACCTGTTCCGCGGTGAAGCGCTGAGCAAGGCCGGCATGGATCGGGTCACGGGCGAC
CACATGGGCATGCTGGCCACTGTGATGAACGCCCTGGCCATGCGCGACGCGCTGGAACGTGCCAATATCTCGGCGATCGT
GATGTCGGCCATCTCGATGGTTGGTGTGACCGATCACTATGACCGTCGCAAGGCCATGCGTCATCTGAACTCCAAGGACG
TGGTGATTTTCGCGGCCGGTACCGGCAATCCGTTCTTTACCACGGATTCGGCAGCCTGCCTGCGCGCCATTGAAATCGAC
GCGGACGTCGTGCTCAAGGCGACCAAGGTTGATGGCGTCTACACCGCTGACCCGTTCAAAGACCCGCATGCCGAGAAGTT
CGATCATCTGACCTACGATGAAGTACTGGATCGCAAGCTGGGTGTAATGGATCTGACGGCTATCTGCCTGTGCCGCGATC
ACAAGATGCCGCTGCGCGTATTTAACATGAACAAGCCGGGCGCCCTGCTGAACATCGTGCATGGTGGCGCTGAAGGCACT
CTGATCGAGGAAGTCCAACAATGA

Upstream 100 bases:

>100_bases
CCATGTTCCGATGGCGCTGAAGCAGCGCCAAGCTAGAGTGAACGCCAGCTGTAAACAGCTCGCAAAGAATTTTTAAAATA
CGCCGCAGGAGAGATTCGCA

Downstream 100 bases:

>100_bases
TCAACGAAATCAAGAAAGACGCTAAAGAGCGCATGACGAAGTCCGTTGAGTCCCTGGCTCACAACTTCGGTCGTATCCGC
ACCGGTCAGGCGCACCCAAG

Product: uridylate kinase

Products: NA

Alternate protein names: UK; Uridine monophosphate kinase; UMP kinase; UMPK [H]

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MAQQGSGYQARYKRILLKLSGEALMGSEEFGIDPKVLDRMALEVGQLVGIGVQVGLVIGGGNLFRGEALSKAGMDRVTGD
HMGMLATVMNALAMRDALERANISAIVMSAISMVGVTDHYDRRKAMRHLNSKDVVIFAAGTGNPFFTTDSAACLRAIEID
ADVVLKATKVDGVYTADPFKDPHAEKFDHLTYDEVLDRKLGVMDLTAICLCRDHKMPLRVFNMNKPGALLNIVHGGAEGT
LIEEVQQ

Sequences:

>Translated_247_residues
MAQQGSGYQARYKRILLKLSGEALMGSEEFGIDPKVLDRMALEVGQLVGIGVQVGLVIGGGNLFRGEALSKAGMDRVTGD
HMGMLATVMNALAMRDALERANISAIVMSAISMVGVTDHYDRRKAMRHLNSKDVVIFAAGTGNPFFTTDSAACLRAIEID
ADVVLKATKVDGVYTADPFKDPHAEKFDHLTYDEVLDRKLGVMDLTAICLCRDHKMPLRVFNMNKPGALLNIVHGGAEGT
LIEEVQQ
>Mature_246_residues
AQQGSGYQARYKRILLKLSGEALMGSEEFGIDPKVLDRMALEVGQLVGIGVQVGLVIGGGNLFRGEALSKAGMDRVTGDH
MGMLATVMNALAMRDALERANISAIVMSAISMVGVTDHYDRRKAMRHLNSKDVVIFAAGTGNPFFTTDSAACLRAIEIDA
DVVLKATKVDGVYTADPFKDPHAEKFDHLTYDEVLDRKLGVMDLTAICLCRDHKMPLRVFNMNKPGALLNIVHGGAEGTL
IEEVQQ

Specific function: Catalyzes the reversible phosphorylation of UMP to UDP [H]

COG id: COG0528

COG function: function code F; Uridylate kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UMP kinase family [H]

Homologues:

Organism=Escherichia coli, GI1786367, Length=233, Percent_Identity=69.0987124463519, Blast_Score=327, Evalue=5e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001048
- InterPro:   IPR011817
- InterPro:   IPR015963 [H]

Pfam domain/function: PF00696 AA_kinase [H]

EC number: =2.7.4.22 [H]

Molecular weight: Translated: 26750; Mature: 26619

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQQGSGYQARYKRILLKLSGEALMGSEEFGIDPKVLDRMALEVGQLVGIGVQVGLVIGG
CCCCCCCHHHHHHHHHHHCCCCCEECCHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEC
GNLFRGEALSKAGMDRVTGDHMGMLATVMNALAMRDALERANISAIVMSAISMVGVTDHY
CCEECCHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHH
DRRKAMRHLNSKDVVIFAAGTGNPFFTTDSAACLRAIEIDADVVLKATKVDGVYTADPFK
HHHHHHHHCCCCCEEEEEECCCCCCEECCHHHHHEEEECCHHHEEEEEECCCEEECCCCC
DPHAEKFDHLTYDEVLDRKLGVMDLTAICLCRDHKMPLRVFNMNKPGALLNIVHGGAEGT
CCCHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCH
LIEEVQQ
HHHHHCC
>Mature Secondary Structure 
AQQGSGYQARYKRILLKLSGEALMGSEEFGIDPKVLDRMALEVGQLVGIGVQVGLVIGG
CCCCCCHHHHHHHHHHHCCCCCEECCHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEC
GNLFRGEALSKAGMDRVTGDHMGMLATVMNALAMRDALERANISAIVMSAISMVGVTDHY
CCEECCHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHH
DRRKAMRHLNSKDVVIFAAGTGNPFFTTDSAACLRAIEIDADVVLKATKVDGVYTADPFK
HHHHHHHHCCCCCEEEEEECCCCCCEECCHHHHHEEEECCHHHEEEEEECCCEEECCCCC
DPHAEKFDHLTYDEVLDRKLGVMDLTAICLCRDHKMPLRVFNMNKPGALLNIVHGGAEGT
CCCHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCH
LIEEVQQ
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA