Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is pyrH [H]
Identifier: 77457330
GI number: 77457330
Start: 1277062
End: 1277805
Strand: Direct
Name: pyrH [H]
Synonym: Pfl01_1103
Alternate gene names: 77457330
Gene position: 1277062-1277805 (Clockwise)
Preceding gene: 77457329
Following gene: 77457331
Centisome position: 19.84
GC content: 58.6
Gene sequence:
>744_bases ATGGCTCAGCAGGGCAGTGGTTATCAGGCTCGCTATAAACGCATTCTACTCAAGCTTAGCGGCGAGGCCCTGATGGGCTC GGAAGAGTTCGGGATCGATCCGAAAGTGCTGGATCGCATGGCGCTGGAAGTCGGCCAACTGGTCGGTATCGGCGTTCAGG TCGGTCTGGTGATCGGTGGTGGCAACCTGTTCCGCGGTGAAGCGCTGAGCAAGGCCGGCATGGATCGGGTCACGGGCGAC CACATGGGCATGCTGGCCACTGTGATGAACGCCCTGGCCATGCGCGACGCGCTGGAACGTGCCAATATCTCGGCGATCGT GATGTCGGCCATCTCGATGGTTGGTGTGACCGATCACTATGACCGTCGCAAGGCCATGCGTCATCTGAACTCCAAGGACG TGGTGATTTTCGCGGCCGGTACCGGCAATCCGTTCTTTACCACGGATTCGGCAGCCTGCCTGCGCGCCATTGAAATCGAC GCGGACGTCGTGCTCAAGGCGACCAAGGTTGATGGCGTCTACACCGCTGACCCGTTCAAAGACCCGCATGCCGAGAAGTT CGATCATCTGACCTACGATGAAGTACTGGATCGCAAGCTGGGTGTAATGGATCTGACGGCTATCTGCCTGTGCCGCGATC ACAAGATGCCGCTGCGCGTATTTAACATGAACAAGCCGGGCGCCCTGCTGAACATCGTGCATGGTGGCGCTGAAGGCACT CTGATCGAGGAAGTCCAACAATGA
Upstream 100 bases:
>100_bases CCATGTTCCGATGGCGCTGAAGCAGCGCCAAGCTAGAGTGAACGCCAGCTGTAAACAGCTCGCAAAGAATTTTTAAAATA CGCCGCAGGAGAGATTCGCA
Downstream 100 bases:
>100_bases TCAACGAAATCAAGAAAGACGCTAAAGAGCGCATGACGAAGTCCGTTGAGTCCCTGGCTCACAACTTCGGTCGTATCCGC ACCGGTCAGGCGCACCCAAG
Product: uridylate kinase
Products: NA
Alternate protein names: UK; Uridine monophosphate kinase; UMP kinase; UMPK [H]
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MAQQGSGYQARYKRILLKLSGEALMGSEEFGIDPKVLDRMALEVGQLVGIGVQVGLVIGGGNLFRGEALSKAGMDRVTGD HMGMLATVMNALAMRDALERANISAIVMSAISMVGVTDHYDRRKAMRHLNSKDVVIFAAGTGNPFFTTDSAACLRAIEID ADVVLKATKVDGVYTADPFKDPHAEKFDHLTYDEVLDRKLGVMDLTAICLCRDHKMPLRVFNMNKPGALLNIVHGGAEGT LIEEVQQ
Sequences:
>Translated_247_residues MAQQGSGYQARYKRILLKLSGEALMGSEEFGIDPKVLDRMALEVGQLVGIGVQVGLVIGGGNLFRGEALSKAGMDRVTGD HMGMLATVMNALAMRDALERANISAIVMSAISMVGVTDHYDRRKAMRHLNSKDVVIFAAGTGNPFFTTDSAACLRAIEID ADVVLKATKVDGVYTADPFKDPHAEKFDHLTYDEVLDRKLGVMDLTAICLCRDHKMPLRVFNMNKPGALLNIVHGGAEGT LIEEVQQ >Mature_246_residues AQQGSGYQARYKRILLKLSGEALMGSEEFGIDPKVLDRMALEVGQLVGIGVQVGLVIGGGNLFRGEALSKAGMDRVTGDH MGMLATVMNALAMRDALERANISAIVMSAISMVGVTDHYDRRKAMRHLNSKDVVIFAAGTGNPFFTTDSAACLRAIEIDA DVVLKATKVDGVYTADPFKDPHAEKFDHLTYDEVLDRKLGVMDLTAICLCRDHKMPLRVFNMNKPGALLNIVHGGAEGTL IEEVQQ
Specific function: Catalyzes the reversible phosphorylation of UMP to UDP [H]
COG id: COG0528
COG function: function code F; Uridylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UMP kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786367, Length=233, Percent_Identity=69.0987124463519, Blast_Score=327, Evalue=5e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR011817 - InterPro: IPR015963 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.4.22 [H]
Molecular weight: Translated: 26750; Mature: 26619
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQQGSGYQARYKRILLKLSGEALMGSEEFGIDPKVLDRMALEVGQLVGIGVQVGLVIGG CCCCCCCHHHHHHHHHHHCCCCCEECCHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEC GNLFRGEALSKAGMDRVTGDHMGMLATVMNALAMRDALERANISAIVMSAISMVGVTDHY CCEECCHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHH DRRKAMRHLNSKDVVIFAAGTGNPFFTTDSAACLRAIEIDADVVLKATKVDGVYTADPFK HHHHHHHHCCCCCEEEEEECCCCCCEECCHHHHHEEEECCHHHEEEEEECCCEEECCCCC DPHAEKFDHLTYDEVLDRKLGVMDLTAICLCRDHKMPLRVFNMNKPGALLNIVHGGAEGT CCCHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCH LIEEVQQ HHHHHCC >Mature Secondary Structure AQQGSGYQARYKRILLKLSGEALMGSEEFGIDPKVLDRMALEVGQLVGIGVQVGLVIGG CCCCCCHHHHHHHHHHHCCCCCEECCHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEC GNLFRGEALSKAGMDRVTGDHMGMLATVMNALAMRDALERANISAIVMSAISMVGVTDHY CCEECCHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHH DRRKAMRHLNSKDVVIFAAGTGNPFFTTDSAACLRAIEIDADVVLKATKVDGVYTADPFK HHHHHHHHCCCCCEEEEEECCCCCCEECCHHHHHEEEECCHHHEEEEEECCCEEECCCCC DPHAEKFDHLTYDEVLDRKLGVMDLTAICLCRDHKMPLRVFNMNKPGALLNIVHGGAEGT CCCHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCH LIEEVQQ HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA